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The map label for this gene is ywbG [H]

Identifier: 157960720

GI number: 157960720

Start: 1089579

End: 1090268

Strand: Reverse

Name: ywbG [H]

Synonym: Spea_0892

Alternate gene names: 157960720

Gene position: 1090268-1089579 (Counterclockwise)

Preceding gene: 157960721

Following gene: 157960719

Centisome position: 21.07

GC content: 49.42

Gene sequence:

>690_bases
ATGAGCCACTCAGTGATAGGGCTATTCTGTTTAGCCTTAACCTTGGTCGGCTATTACGCCAGCAAGGCTCTATATCGTCG
TCAACGAAAAGTCTGGTTTGCGCCAATTATTATTGCCCCAGTGATAATACTAAGCGTGGTCGTCAGCCTAAATATTACGG
TAAGCGATTACTTCAGCTACACCCACTGGTTAGCCGCTATGTTAGCCCCGGCAACCATCGCCTTTGCTGTGCCTATTTAT
CGTGAAAGACAATTGATAAAGCAGTACCCTATCACCCTAAGCTTTGGGGTGATCACCGGCTTGTTATTAGGTATCGGCTC
ATCTTGGTTATTAACCCTGTGTACTAATATGCCGTCACAGATCTCCCACAGCTTGATGGTGCGCTCGGTCTCGACCCCCT
TTGCCATCGAAGCCACAGGTGCCTTTGGTGGCGTCCCTGAACTTACCGCCATGCTAGTGCTGCTCACAGGCATTATGGGG
ATGGTAATTTGTGAACCACTATTTAAAGTGGCTAATATTCGCAGCTCTGTGGCCAAAGGCGTGGCATTAGGAGCATCGGC
TCATGGCGCTGGCGCGGCTAAGGCCAGTGAAATAGGCAGACAAGAAGGGGTTATCGCCAGTCTGACCATGATATTTACCG
GTATCGCTATGGTGTTAACTGCGCCACTGTTCGCAGCACTAATCAGATAG

Upstream 100 bases:

>100_bases
TTGAACGTAAAAAGAATTTGAGAAAGCGCTTAGCCTCTTCTCAGGCGCAAGTTATTCCGCTACAGCGCGCCGATTTAGCG
AGTGAACAGAGGAAGGCAGC

Downstream 100 bases:

>100_bases
CCCTACTTATCTCGCTGCACTAGTCAAATCTCGCACCACTAATCAAATAGCTCTATTTATCTCGCTGCACTAATCAAATC
TCGCAGCACTAATCAAATAG

Product: LrgB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSHSVIGLFCLALTLVGYYASKALYRRQRKVWFAPIIIAPVIILSVVVSLNITVSDYFSYTHWLAAMLAPATIAFAVPIY
RERQLIKQYPITLSFGVITGLLLGIGSSWLLTLCTNMPSQISHSLMVRSVSTPFAIEATGAFGGVPELTAMLVLLTGIMG
MVICEPLFKVANIRSSVAKGVALGASAHGAGAAKASEIGRQEGVIASLTMIFTGIAMVLTAPLFAALIR

Sequences:

>Translated_229_residues
MSHSVIGLFCLALTLVGYYASKALYRRQRKVWFAPIIIAPVIILSVVVSLNITVSDYFSYTHWLAAMLAPATIAFAVPIY
RERQLIKQYPITLSFGVITGLLLGIGSSWLLTLCTNMPSQISHSLMVRSVSTPFAIEATGAFGGVPELTAMLVLLTGIMG
MVICEPLFKVANIRSSVAKGVALGASAHGAGAAKASEIGRQEGVIASLTMIFTGIAMVLTAPLFAALIR
>Mature_228_residues
SHSVIGLFCLALTLVGYYASKALYRRQRKVWFAPIIIAPVIILSVVVSLNITVSDYFSYTHWLAAMLAPATIAFAVPIYR
ERQLIKQYPITLSFGVITGLLLGIGSSWLLTLCTNMPSQISHSLMVRSVSTPFAIEATGAFGGVPELTAMLVLLTGIMGM
VICEPLFKVANIRSSVAKGVALGASAHGAGAAKASEIGRQEGVIASLTMIFTGIAMVLTAPLFAALIR

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=222, Percent_Identity=30.6306306306306, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24349; Mature: 24217

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHSVIGLFCLALTLVGYYASKALYRRQRKVWFAPIIIAPVIILSVVVSLNITVSDYFSY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
THWLAAMLAPATIAFAVPIYRERQLIKQYPITLSFGVITGLLLGIGSSWLLTLCTNMPSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCHHHHHHHHHCCHHH
ISHSLMVRSVSTPFAIEATGAFGGVPELTAMLVLLTGIMGMVICEPLFKVANIRSSVAKG
HHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALGASAHGAGAAKASEIGRQEGVIASLTMIFTGIAMVLTAPLFAALIR
HHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SHSVIGLFCLALTLVGYYASKALYRRQRKVWFAPIIIAPVIILSVVVSLNITVSDYFSY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
THWLAAMLAPATIAFAVPIYRERQLIKQYPITLSFGVITGLLLGIGSSWLLTLCTNMPSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCHHHHHHHHHCCHHH
ISHSLMVRSVSTPFAIEATGAFGGVPELTAMLVLLTGIMGMVICEPLFKVANIRSSVAKG
HHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALGASAHGAGAAKASEIGRQEGVIASLTMIFTGIAMVLTAPLFAALIR
HHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]