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The map label for this gene is cidA1 [H]

Identifier: 157960721

GI number: 157960721

Start: 1090265

End: 1090750

Strand: Reverse

Name: cidA1 [H]

Synonym: Spea_0893

Alternate gene names: 157960721

Gene position: 1090750-1090265 (Counterclockwise)

Preceding gene: 157960723

Following gene: 157960720

Centisome position: 21.08

GC content: 50.21

Gene sequence:

>486_bases
ATGGCAAGCCTTGCCACCCCATCTCGAATTAATCTCAAGCAAACGGCTCTGACTGCCGGACAGATAACTCTGCTATGCCT
ATTGGCTTGGGGTTGCCAGCTCTTAGCCAAGCAGCTCAACTCCCCCATTCCGGGCAGCGTTATCGGCCTTGGCATCTTGC
TTCTGCTATTGGCCTGCAAATTGCTCCCCGAGACCAGTGTTAACTTAGGCTCCAGTTGGCTGATTGGCGATCTATTGCTT
TTTTTCATTCCACCAGTGGTTGCCGTGATTAAATACCAAGACTTGCTTGAACACTATGGCGCCGTGCTTATTGGCTCCAT
GCTGGCCGCCAGCAGCTGTGTACTATTAGGCACTGCCTTTACCGTTGATAGACTGTTTAAGTTTGAACGTAAAAAGAATT
TGAGAAAGCGCTTAGCCTCTTCTCAGGCGCAAGTTATTCCGCTACAGCGCGCCGATTTAGCGAGTGAACAGAGGAAGGCA
GCATGA

Upstream 100 bases:

>100_bases
CCATTACTTATAGATTCCATTCTTAATATTCATTTTTTTTATCAATTAGGCAAGCGTAAAATGACTGTCATTCAGCAATG
ACGCTAGATTGGAACTCATC

Downstream 100 bases:

>100_bases
GCCACTCAGTGATAGGGCTATTCTGTTTAGCCTTAACCTTGGTCGGCTATTACGCCAGCAAGGCTCTATATCGTCGTCAA
CGAAAAGTCTGGTTTGCGCC

Product: LrgA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MASLATPSRINLKQTALTAGQITLLCLLAWGCQLLAKQLNSPIPGSVIGLGILLLLLACKLLPETSVNLGSSWLIGDLLL
FFIPPVVAVIKYQDLLEHYGAVLIGSMLAASSCVLLGTAFTVDRLFKFERKKNLRKRLASSQAQVIPLQRADLASEQRKA
A

Sequences:

>Translated_161_residues
MASLATPSRINLKQTALTAGQITLLCLLAWGCQLLAKQLNSPIPGSVIGLGILLLLLACKLLPETSVNLGSSWLIGDLLL
FFIPPVVAVIKYQDLLEHYGAVLIGSMLAASSCVLLGTAFTVDRLFKFERKKNLRKRLASSQAQVIPLQRADLASEQRKA
A
>Mature_160_residues
ASLATPSRINLKQTALTAGQITLLCLLAWGCQLLAKQLNSPIPGSVIGLGILLLLLACKLLPETSVNLGSSWLIGDLLLF
FIPPVVAVIKYQDLLEHYGAVLIGSMLAASSCVLLGTAFTVDRLFKFERKKNLRKRLASSQAQVIPLQRADLASEQRKAA

Specific function: Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. W

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CidA/LrgA family. CidA subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 17339; Mature: 17208

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLATPSRINLKQTALTAGQITLLCLLAWGCQLLAKQLNSPIPGSVIGLGILLLLLACK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LLPETSVNLGSSWLIGDLLLFFIPPVVAVIKYQDLLEHYGAVLIGSMLAASSCVLLGTAF
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVDRLFKFERKKNLRKRLASSQAQVIPLQRADLASEQRKAA
HHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASLATPSRINLKQTALTAGQITLLCLLAWGCQLLAKQLNSPIPGSVIGLGILLLLLACK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LLPETSVNLGSSWLIGDLLLFFIPPVVAVIKYQDLLEHYGAVLIGSMLAASSCVLLGTAF
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVDRLFKFERKKNLRKRLASSQAQVIPLQRADLASEQRKAA
HHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]