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The map label for this gene is ycaC [C]

Identifier: 157960660

GI number: 157960660

Start: 1032804

End: 1033346

Strand: Reverse

Name: ycaC [C]

Synonym: Spea_0832

Alternate gene names: 157960660

Gene position: 1033346-1032804 (Counterclockwise)

Preceding gene: 157960666

Following gene: 157960658

Centisome position: 19.97

GC content: 47.33

Gene sequence:

>543_bases
ATGCTAAAACCAGAAGAGTGTGTATTGGTTGTGGTAGATGTACAGGGACAACTAGCACGCATCATGCACCAAAGTGAGCA
ACTGCATCGAAAACTAGCGCAGCTGATTAAGGGGGCGCAATTATTTGAGGTTCCTATCCTTTGGCTGGAGCAGCTCCCTG
ATAAACTCGGCGCAACCAGTGACGAGTTAGCCCTAGAGCTAGCTAAGACCACAACCCCCATTGCCAAGGAGCACTTCAGT
GGTTGGCAGGCTAATGAATTTCAGACAAGACTCACAGGCCTTGAGCAGAAACATATTATCCTTGCGGGAATCGAAACCCA
TATCTGCGTCTACCAGACCTGTAGAGAGCTATTAGATAATGGCTACCATGTTCACCTTGTGATAGATGCAGTTTCCTCGA
GGGAAGAGGACAATAAAACCAGCGGTATTGAAATGATACAAGCAAGTGGCGCGGTACAGACCAATGTGGAGTCACTGCTA
TTTGAGTTACAGCGTCAGGCAAGGGGCGAGCGCTTTAAATCACTACTGAAGCTAATCAAATAG

Upstream 100 bases:

>100_bases
TAAAGCGTAAGTATTACCACCTTAGACTTATTTCCAATTGGCGCGCTCAGCTAGATCAGTTTTACTGGCATGCACCCTTA
TAAATTTAAAGAAGGCAAAG

Downstream 100 bases:

>100_bases
ACAAGCTAAGCCAATTAAATTGGAGTGTAACTTTGTTTAAACTAGATAAATGGCAACAGTAAAAGATCCACCTTCTAAAG
AAGGTGGCTTTGCCCATCTG

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase Hydrolase Family Protein; Isochorismatase Superfamily Hydrolase; Nicotinamidase-Like Amidase; Amidase; Isochorismatase Family Hydrolase; Isochorismatase Domain-Containing; Hydrolase; Amidohydrolase; Hydrolase Isochorismatase; Amidase Related Nicotinamidase; YcaC Like Amidohydrolase; Isochorismatase Family; Nicotinamidase; YcaC-Related Amidohydrolase; Isochorismatase Domain-Containing A; Isochorismatase Hydrolase Family; Hydrolase Isochorismatase Family; Nicotinamidase-Related Amidase

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MLKPEECVLVVVDVQGQLARIMHQSEQLHRKLAQLIKGAQLFEVPILWLEQLPDKLGATSDELALELAKTTTPIAKEHFS
GWQANEFQTRLTGLEQKHIILAGIETHICVYQTCRELLDNGYHVHLVIDAVSSREEDNKTSGIEMIQASGAVQTNVESLL
FELQRQARGERFKSLLKLIK

Sequences:

>Translated_180_residues
MLKPEECVLVVVDVQGQLARIMHQSEQLHRKLAQLIKGAQLFEVPILWLEQLPDKLGATSDELALELAKTTTPIAKEHFS
GWQANEFQTRLTGLEQKHIILAGIETHICVYQTCRELLDNGYHVHLVIDAVSSREEDNKTSGIEMIQASGAVQTNVESLL
FELQRQARGERFKSLLKLIK
>Mature_180_residues
MLKPEECVLVVVDVQGQLARIMHQSEQLHRKLAQLIKGAQLFEVPILWLEQLPDKLGATSDELALELAKTTTPIAKEHFS
GWQANEFQTRLTGLEQKHIILAGIETHICVYQTCRELLDNGYHVHLVIDAVSSREEDNKTSGIEMIQASGAVQTNVESLL
FELQRQARGERFKSLLKLIK

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI209969695, Length=178, Percent_Identity=34.8314606741573, Blast_Score=94, Evalue=7e-20,
Organism=Homo sapiens, GI103471987, Length=179, Percent_Identity=28.4916201117318, Blast_Score=84, Evalue=5e-17,
Organism=Homo sapiens, GI13376007, Length=194, Percent_Identity=31.9587628865979, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17540156, Length=178, Percent_Identity=32.0224719101124, Blast_Score=90, Evalue=6e-19,
Organism=Drosophila melanogaster, GI19922924, Length=181, Percent_Identity=27.0718232044199, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21357489, Length=181, Percent_Identity=29.2817679558011, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20336; Mature: 20336

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPEECVLVVVDVQGQLARIMHQSEQLHRKLAQLIKGAQLFEVPILWLEQLPDKLGATS
CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHCCCH
DELALELAKTTTPIAKEHFSGWQANEFQTRLTGLEQKHIILAGIETHICVYQTCRELLDN
HHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHC
GYHVHLVIDAVSSREEDNKTSGIEMIQASGAVQTNVESLLFELQRQARGERFKSLLKLIK
CCEEEEEEEEHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLKPEECVLVVVDVQGQLARIMHQSEQLHRKLAQLIKGAQLFEVPILWLEQLPDKLGATS
CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHCCCH
DELALELAKTTTPIAKEHFSGWQANEFQTRLTGLEQKHIILAGIETHICVYQTCRELLDN
HHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHC
GYHVHLVIDAVSSREEDNKTSGIEMIQASGAVQTNVESLLFELQRQARGERFKSLLKLIK
CCEEEEEEEEHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA