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The map label for this gene is narP [H]

Identifier: 157960657

GI number: 157960657

Start: 1028155

End: 1028784

Strand: Reverse

Name: narP [H]

Synonym: Spea_0829

Alternate gene names: 157960657

Gene position: 1028784-1028155 (Counterclockwise)

Preceding gene: 157960658

Following gene: 157960654

Centisome position: 19.88

GC content: 47.78

Gene sequence:

>630_bases
ATGGGAAAGCCCTATTCAGTTCTAGTTATTGATGATCACCCACTGCTACGCCGTGGGATCTGTCAGCTTGTTACCTCTGA
TTCTGATTTCACCTTATTTGGAGAAGCAGGCAGTGGGTTAGATGCGCTGTCAGCCGTTACTGATAACGAACCTGATATCA
TACTGCTCGATCTCAACATGAAGGGAATGACGGGTTTAGACACCCTCAATGCGCTCAGGCAGGAAGGGGTCACTTCTCGT
ATAGTGATCTTAACGGTATCTGATGCTAAGCAAGACGTGATCCGCTTAGTCCGAGCCGGTGCCGATGGCTACCTACTTAA
AGATACTGAGCCAGATCTACTGCTTGAGATGCTCAAAAATGCCATGTTGGGCCACAGGGTGATCAGCGATACCGTGCAAG
AGTATTTGTCAGAACTCAATAGCTCGGTTAACGAACAAGAGTGGCTCGAAAACCTCACCCCTAGAGAGCTCGAAATTCTG
CAGCACCTTGCCGAAGGTCAGAGTAATCGTATCGTCGCTGAGCAGCTGCACATTAGTGAAGGCACAGTTAAAGTGCATGT
GAAAAACTTATTGCGTAAAGCCAATGCAAAGTCGCGTACAGAGATGGCCGTTCGCTACCTAAATCAGTAA

Upstream 100 bases:

>100_bases
AGCGAATAGATTTCAACTTCTATGCTGCTGATTTTTGAGGGCGGTTAATGGATTTTTGCGTTATTACTTTGACGAATATA
CCTCAGCAGGAGGCCTTAAA

Downstream 100 bases:

>100_bases
CGCACCTTTTCAAACAAAAAAGCAGCCAATGGCTGCTTTTTTTGTACCTATTTGGACAGAAATAAATCTGAGGATCGGCA
ATCAATTTTCATCTAAGAAA

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MGKPYSVLVIDDHPLLRRGICQLVTSDSDFTLFGEAGSGLDALSAVTDNEPDIILLDLNMKGMTGLDTLNALRQEGVTSR
IVILTVSDAKQDVIRLVRAGADGYLLKDTEPDLLLEMLKNAMLGHRVISDTVQEYLSELNSSVNEQEWLENLTPRELEIL
QHLAEGQSNRIVAEQLHISEGTVKVHVKNLLRKANAKSRTEMAVRYLNQ

Sequences:

>Translated_209_residues
MGKPYSVLVIDDHPLLRRGICQLVTSDSDFTLFGEAGSGLDALSAVTDNEPDIILLDLNMKGMTGLDTLNALRQEGVTSR
IVILTVSDAKQDVIRLVRAGADGYLLKDTEPDLLLEMLKNAMLGHRVISDTVQEYLSELNSSVNEQEWLENLTPRELEIL
QHLAEGQSNRIVAEQLHISEGTVKVHVKNLLRKANAKSRTEMAVRYLNQ
>Mature_208_residues
GKPYSVLVIDDHPLLRRGICQLVTSDSDFTLFGEAGSGLDALSAVTDNEPDIILLDLNMKGMTGLDTLNALRQEGVTSRI
VILTVSDAKQDVIRLVRAGADGYLLKDTEPDLLLEMLKNAMLGHRVISDTVQEYLSELNSSVNEQEWLENLTPRELEILQ
HLAEGQSNRIVAEQLHISEGTVKVHVKNLLRKANAKSRTEMAVRYLNQ

Specific function: This protein activates the expression of the nitrate reductase (narGHJI) and formate dehydrogenase-N (fdnGHI) operons and represses the transcription of the fumarate reductase (frdABCD) operon in response to a nitrate/nitrite induction signal transmitted

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=206, Percent_Identity=50.9708737864078, Blast_Score=211, Evalue=3e-56,
Organism=Escherichia coli, GI1787473, Length=205, Percent_Identity=44.8780487804878, Blast_Score=149, Evalue=1e-37,
Organism=Escherichia coli, GI1788222, Length=206, Percent_Identity=30.0970873786408, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1790102, Length=203, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1788712, Length=193, Percent_Identity=25.3886010362694, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786747, Length=200, Percent_Identity=24.5, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23204; Mature: 23073

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKPYSVLVIDDHPLLRRGICQLVTSDSDFTLFGEAGSGLDALSAVTDNEPDIILLDLNM
CCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCCCCEEEEECCC
KGMTGLDTLNALRQEGVTSRIVILTVSDAKQDVIRLVRAGADGYLLKDTEPDLLLEMLKN
CCCCCHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHH
AMLGHRVISDTVQEYLSELNSSVNEQEWLENLTPRELEILQHLAEGQSNRIVAEQLHISE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCEEHHHEECCC
GTVKVHVKNLLRKANAKSRTEMAVRYLNQ
CEEEEHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
GKPYSVLVIDDHPLLRRGICQLVTSDSDFTLFGEAGSGLDALSAVTDNEPDIILLDLNM
CCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCCCCEEEEECCC
KGMTGLDTLNALRQEGVTSRIVILTVSDAKQDVIRLVRAGADGYLLKDTEPDLLLEMLKN
CCCCCHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHH
AMLGHRVISDTVQEYLSELNSSVNEQEWLENLTPRELEILQHLAEGQSNRIVAEQLHISE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCEEHHHEECCC
GTVKVHVKNLLRKANAKSRTEMAVRYLNQ
CEEEEHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501030; 9278503 [H]