Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157960647
Identifier: 157960647
GI number: 157960647
Start: 1016282
End: 1016761
Strand: Reverse
Name: 157960647
Synonym: Spea_0819
Alternate gene names: NA
Gene position: 1016761-1016282 (Counterclockwise)
Preceding gene: 157960650
Following gene: 157960644
Centisome position: 19.65
GC content: 41.46
Gene sequence:
>480_bases TTGGTAGTTTTAATTACCTTACTTAGCGGCTGTAGCAGCACAGAGCAAAGCATGCTCTTTGACGACTTAGAGCAAAGAGA TGGTGTTATCTACTATCAAGACGCTCTCTATACTGGGGTATTTTTGCATAAGGACAAACTGCAAAGAGTTAGAGCTAAAG GTTACCTTAGCGACGGGCTACTCCAAGGAGAAGTTGTCAGCTATGATGGCCATGCCAGAGTAACAAGAACCGAGCACTTT AAAGATGGCAAACCCCATGGGATCCTAACCAAGTTTTATGAAGATGGCACAATAGAAGAACAAGGCCAATTTAAGGATGG CCAAGCACTCGGAAAATGGCTGCTTTATTATGAAAGTGGCGCCTTAGCTCGTGAGTCTTTTCATAAAAATGACCGACCTG AAGGACTGTGGACGTATTTTAATGAAGATGGAACTATAAAAGAAACAAGAGTCTATAAAAACGGTCAATGGATAGAATAA
Upstream 100 bases:
>100_bases AATTTAATCGGCAGCTTAATGCTGTCAGCAAAACATCAAAAAAATTTAGTGGTATTCCGCCTAAAAGGAACGAAGGATAA TGTGTAAGGCTATTTCAACA
Downstream 100 bases:
>100_bases CATCTCTACAAAGTCTGCTTTAACGTTAGCGCCTAATGCGTAAGGTGCAAGTAACCGGCGCGTGGTCGCTACTTTGGCTA TCACGCTCAAAGCTTGGGTT
Product: MORN repeat-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MVVLITLLSGCSSTEQSMLFDDLEQRDGVIYYQDALYTGVFLHKDKLQRVRAKGYLSDGLLQGEVVSYDGHARVTRTEHF KDGKPHGILTKFYEDGTIEEQGQFKDGQALGKWLLYYESGALARESFHKNDRPEGLWTYFNEDGTIKETRVYKNGQWIE
Sequences:
>Translated_159_residues MVVLITLLSGCSSTEQSMLFDDLEQRDGVIYYQDALYTGVFLHKDKLQRVRAKGYLSDGLLQGEVVSYDGHARVTRTEHF KDGKPHGILTKFYEDGTIEEQGQFKDGQALGKWLLYYESGALARESFHKNDRPEGLWTYFNEDGTIKETRVYKNGQWIE >Mature_159_residues MVVLITLLSGCSSTEQSMLFDDLEQRDGVIYYQDALYTGVFLHKDKLQRVRAKGYLSDGLLQGEVVSYDGHARVTRTEHF KDGKPHGILTKFYEDGTIEEQGQFKDGQALGKWLLYYESGALARESFHKNDRPEGLWTYFNEDGTIKETRVYKNGQWIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18298; Mature: 18298
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVLITLLSGCSSTEQSMLFDDLEQRDGVIYYQDALYTGVFLHKDKLQRVRAKGYLSDGL CEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHEEEHHHHHHHHHCCCCCCCC LQGEVVSYDGHARVTRTEHFKDGKPHGILTKFYEDGTIEEQGQFKDGQALGKWLLYYESG CCCEEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHEEEEECCC ALARESFHKNDRPEGLWTYFNEDGTIKETRVYKNGQWIE CHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCCCC >Mature Secondary Structure MVVLITLLSGCSSTEQSMLFDDLEQRDGVIYYQDALYTGVFLHKDKLQRVRAKGYLSDGL CEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHEEEHHHHHHHHHCCCCCCCC LQGEVVSYDGHARVTRTEHFKDGKPHGILTKFYEDGTIEEQGQFKDGQALGKWLLYYESG CCCEEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHEEEEECCC ALARESFHKNDRPEGLWTYFNEDGTIKETRVYKNGQWIE CHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA