| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157960578
Identifier: 157960578
GI number: 157960578
Start: 927428
End: 928855
Strand: Reverse
Name: 157960578
Synonym: Spea_0750
Alternate gene names: NA
Gene position: 928855-927428 (Counterclockwise)
Preceding gene: 157960579
Following gene: 157960577
Centisome position: 17.95
GC content: 49.16
Gene sequence:
>1428_bases ATGCATAAGTCTATTATTCTCTTTATTGCCCTTTTACTATCAAGCCTCTCTCTCCCCAGTTTTGCCACTACGGAATCGAC TGCGACAAACAATCTCTGGCACTACACCAATGCTCAGGGGGAGCTTAAGGTTAAACTCTATTTCTTCTGGTCTAAGACCT GCCCCCACTGCGCCGAGGCTCACCCCTTTATAGACAGCTTGCCCGAGCGCTACCCCTGGCTAGAGATTGAAGATCATATG ATCACTGCGCCAGACACCATGGAAGTATGGCAACAAGTTGCTAAACAGACAGGCACAGAAGCGCGCTCCGTACCCTACTT TGCTAGCGGTGAAAAAGCCGTAGTCGGTTATAGCAGTCAGGCCGTTACCGGTGAGTTTTTAGTTCAACGGCTAAAATCTT ATTACGTATCCTTAGGTGGTAAATTAGCCCCTGAAGCCGAAGGCCAATATCCAGTAGTGGCGCCCGCTTCAGTTGGGTTA TTTACAACCTGCAGTGAAACTGATAGCAAAGCTGGCAGCGATGGCACCTGTGATTTAGGCCTAGACACGAACAACGAAAT TGCCAGCTCAGACGTTCAACCTGTTGAACTTCCACTAGTGGGCGTAGTGCACCCAGAGCAGATGTCGTTACCGTTACTGA CTGTGGTGCTAGCGGGAGTCGACGCTTTCAACCCATGCGCCTTCTTCGTATTACTGTTTTTGCTGTCGATTATGGTCAAC GCTAAGAGCCGTACCCGCATGCTGATTGTCGGCGGGATCTTCGTGTTTTTCTCAGGTTTTATCTACTTCATCTTTATGAG CGCATGGCTCAATATCTTTCAGCTTCTTGGTGCAGGCAGTGATGGTGGCTGGATTATTCTCGGAGCGGGTATGTTGGCGC TCGTTGCCGGGGCAGTAAACATCAAAGACTATTTCTTTACCAAGGGGGAAGTCACCCTTTCTATGTCGGCCGAGAACCGT ACAGGCTTGATAAAACGTATGGGCAAGTTAACCAGCGCCAGCAGCATGACGGCCATGATTGCCGGCACTGTAGTGCTGTC GATCTTAGCCAACGCCTATGAGCTGCTGTGCACCGCAGGCTTCCCGATGATCTACACCAGCGTTCTATCGATGCATGACT TAGATACGTTCGAGCGCTATATGTATTTGGTGATGTATAACGTGGTTTATGTCATCCCGCTAGCCGCGATTGTTATCGCC TTTAGTGTATCGCTTGGTAAGCGCAAGCTCACAGAGAAAGAGGGCCAAACCCTTAAGCTAATGTCGGGCATTATGATGAT GGGCCTAGGTGGCATGTTAGCCGCCGACCCAACGGCGCTGCAGAATGTCGCCTTAGCGATAGGACTTATCTTAAGCTCTA TCGTGTTGACCATTATCATTACCCTTATTCGTAAGAGTATTGAGAAGGCTCAAACTGCAAAATCATAG
Upstream 100 bases:
>100_bases TCCCACCACAAAAACAAAACATTAATTTAGCAACCGCGAATCATTAACGTAGAGTACTAGCAACGTTTAACTCATGGCCA ATCAATCTGTCGGAGTTCCT
Downstream 100 bases:
>100_bases CGTAAATGAATAAAGGTCTTAGCTTATGATTAAGCTAAGACCTTCGTTTTCTAAAACAATGACCTAGCTCCTAGGACGCT TTGCTGCGAGGATGGGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MHKSIILFIALLLSSLSLPSFATTESTATNNLWHYTNAQGELKVKLYFFWSKTCPHCAEAHPFIDSLPERYPWLEIEDHM ITAPDTMEVWQQVAKQTGTEARSVPYFASGEKAVVGYSSQAVTGEFLVQRLKSYYVSLGGKLAPEAEGQYPVVAPASVGL FTTCSETDSKAGSDGTCDLGLDTNNEIASSDVQPVELPLVGVVHPEQMSLPLLTVVLAGVDAFNPCAFFVLLFLLSIMVN AKSRTRMLIVGGIFVFFSGFIYFIFMSAWLNIFQLLGAGSDGGWIILGAGMLALVAGAVNIKDYFFTKGEVTLSMSAENR TGLIKRMGKLTSASSMTAMIAGTVVLSILANAYELLCTAGFPMIYTSVLSMHDLDTFERYMYLVMYNVVYVIPLAAIVIA FSVSLGKRKLTEKEGQTLKLMSGIMMMGLGGMLAADPTALQNVALAIGLILSSIVLTIIITLIRKSIEKAQTAKS
Sequences:
>Translated_475_residues MHKSIILFIALLLSSLSLPSFATTESTATNNLWHYTNAQGELKVKLYFFWSKTCPHCAEAHPFIDSLPERYPWLEIEDHM ITAPDTMEVWQQVAKQTGTEARSVPYFASGEKAVVGYSSQAVTGEFLVQRLKSYYVSLGGKLAPEAEGQYPVVAPASVGL FTTCSETDSKAGSDGTCDLGLDTNNEIASSDVQPVELPLVGVVHPEQMSLPLLTVVLAGVDAFNPCAFFVLLFLLSIMVN AKSRTRMLIVGGIFVFFSGFIYFIFMSAWLNIFQLLGAGSDGGWIILGAGMLALVAGAVNIKDYFFTKGEVTLSMSAENR TGLIKRMGKLTSASSMTAMIAGTVVLSILANAYELLCTAGFPMIYTSVLSMHDLDTFERYMYLVMYNVVYVIPLAAIVIA FSVSLGKRKLTEKEGQTLKLMSGIMMMGLGGMLAADPTALQNVALAIGLILSSIVLTIIITLIRKSIEKAQTAKS >Mature_475_residues MHKSIILFIALLLSSLSLPSFATTESTATNNLWHYTNAQGELKVKLYFFWSKTCPHCAEAHPFIDSLPERYPWLEIEDHM ITAPDTMEVWQQVAKQTGTEARSVPYFASGEKAVVGYSSQAVTGEFLVQRLKSYYVSLGGKLAPEAEGQYPVVAPASVGL FTTCSETDSKAGSDGTCDLGLDTNNEIASSDVQPVELPLVGVVHPEQMSLPLLTVVLAGVDAFNPCAFFVLLFLLSIMVN AKSRTRMLIVGGIFVFFSGFIYFIFMSAWLNIFQLLGAGSDGGWIILGAGMLALVAGAVNIKDYFFTKGEVTLSMSAENR TGLIKRMGKLTSASSMTAMIAGTVVLSILANAYELLCTAGFPMIYTSVLSMHDLDTFERYMYLVMYNVVYVIPLAAIVIA FSVSLGKRKLTEKEGQTLKLMSGIMMMGLGGMLAADPTALQNVALAIGLILSSIVLTIIITLIRKSIEKAQTAKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51455; Mature: 51455
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKSIILFIALLLSSLSLPSFATTESTATNNLWHYTNAQGELKVKLYFFWSKTCPHCAEA CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCHHHC HPFIDSLPERYPWLEIEDHMITAPDTMEVWQQVAKQTGTEARSVPYFASGEKAVVGYSSQ CCHHHHHHHHCCCEEECCCEECCCCHHHHHHHHHHHCCCCHHCCCCEECCCEEEEECCCC AVTGEFLVQRLKSYYVSLGGKLAPEAEGQYPVVAPASVGLFTTCSETDSKAGSDGTCDLG CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCCCCCCEEEC LDTNNEIASSDVQPVELPLVGVVHPEQMSLPLLTVVLAGVDAFNPCAFFVLLFLLSIMVN CCCCCCCCCCCCCCEEECEEEEECCCHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC AKSRTRMLIVGGIFVFFSGFIYFIFMSAWLNIFQLLGAGSDGGWIILGAGMLALVAGAVN CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCC IKDYFFTKGEVTLSMSAENRTGLIKRMGKLTSASSMTAMIAGTVVLSILANAYELLCTAG HHHHEEECCCEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCC FPMIYTSVLSMHDLDTFERYMYLVMYNVVYVIPLAAIVIAFSVSLGKRKLTEKEGQTLKL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH MSGIMMMGLGGMLAADPTALQNVALAIGLILSSIVLTIIITLIRKSIEKAQTAKS HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHKSIILFIALLLSSLSLPSFATTESTATNNLWHYTNAQGELKVKLYFFWSKTCPHCAEA CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCHHHC HPFIDSLPERYPWLEIEDHMITAPDTMEVWQQVAKQTGTEARSVPYFASGEKAVVGYSSQ CCHHHHHHHHCCCEEECCCEECCCCHHHHHHHHHHHCCCCHHCCCCEECCCEEEEECCCC AVTGEFLVQRLKSYYVSLGGKLAPEAEGQYPVVAPASVGLFTTCSETDSKAGSDGTCDLG CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCCCCCCEEEC LDTNNEIASSDVQPVELPLVGVVHPEQMSLPLLTVVLAGVDAFNPCAFFVLLFLLSIMVN CCCCCCCCCCCCCCEEECEEEEECCCHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC AKSRTRMLIVGGIFVFFSGFIYFIFMSAWLNIFQLLGAGSDGGWIILGAGMLALVAGAVN CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCC IKDYFFTKGEVTLSMSAENRTGLIKRMGKLTSASSMTAMIAGTVVLSILANAYELLCTAG HHHHEEECCCEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCC FPMIYTSVLSMHDLDTFERYMYLVMYNVVYVIPLAAIVIAFSVSLGKRKLTEKEGQTLKL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH MSGIMMMGLGGMLAADPTALQNVALAIGLILSSIVLTIIITLIRKSIEKAQTAKS HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA