| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960579
Identifier: 157960579
GI number: 157960579
Start: 929175
End: 929591
Strand: Reverse
Name: 157960579
Synonym: Spea_0751
Alternate gene names: NA
Gene position: 929591-929175 (Counterclockwise)
Preceding gene: 157960582
Following gene: 157960578
Centisome position: 17.96
GC content: 45.8
Gene sequence:
>417_bases ATGAAGTCTCTAGCCGCTGTTTGTCTATTGTTCGCAGGAAGCGCGGTTGCGCAATGTGATAATAAAACCCATATTGTTGA CATTCCCTATGCTAAAAACAGCTCCTATTTTGAGGGCCATTATGCCTCTCTGCTCGATAAGCTTGCTCGAGATCCCCAAG CTGGTACAGGCTATTTACTGCTTCAGTTTGATGTCAGTCAAAATCAGTCGTCTGAAGAGAAGCGTAAGTACAATAAGTGG TTAGCAGAGCGTCGTATTGAAAGAGTCAAAAACCACCTTAACAAGGCGAACTACCCAGCCCCTGTTATCACCCGTATATT GACCGCAAGTAATGATGCGACTCGAAGCGTATCGGTTGTTTGGTGCCCCGATGAAACTGACTACCAAACTATACAGGTCG CCAGCAAAGCCGAGTAA
Upstream 100 bases:
>100_bases CGCTTTGCAATGGCATAAATTCCAATCGAATTTGAAAGTTCCTACTGTTTCTATGTATTAATTTTTTCAAACGACTCTTA TGTTATCAAGGATGTTTAAG
Downstream 100 bases:
>100_bases ACCGACATTAATGCCAGATACGGTATATAGAGGCATGAGTTGAGGCATTAGTGGGAACTGTGATGTAAACCAAGCAAGTC GGCAACAGACTCGCGACTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MKSLAAVCLLFAGSAVAQCDNKTHIVDIPYAKNSSYFEGHYASLLDKLARDPQAGTGYLLLQFDVSQNQSSEEKRKYNKW LAERRIERVKNHLNKANYPAPVITRILTASNDATRSVSVVWCPDETDYQTIQVASKAE
Sequences:
>Translated_138_residues MKSLAAVCLLFAGSAVAQCDNKTHIVDIPYAKNSSYFEGHYASLLDKLARDPQAGTGYLLLQFDVSQNQSSEEKRKYNKW LAERRIERVKNHLNKANYPAPVITRILTASNDATRSVSVVWCPDETDYQTIQVASKAE >Mature_138_residues MKSLAAVCLLFAGSAVAQCDNKTHIVDIPYAKNSSYFEGHYASLLDKLARDPQAGTGYLLLQFDVSQNQSSEEKRKYNKW LAERRIERVKNHLNKANYPAPVITRILTASNDATRSVSVVWCPDETDYQTIQVASKAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15468; Mature: 15468
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLAAVCLLFAGSAVAQCDNKTHIVDIPYAKNSSYFEGHYASLLDKLARDPQAGTGYLL CHHHHHHHHHHHCCHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEE LQFDVSQNQSSEEKRKYNKWLAERRIERVKNHLNKANYPAPVITRILTASNDATRSVSVV EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEE WCPDETDYQTIQVASKAE ECCCCCCCEEEEECCCCC >Mature Secondary Structure MKSLAAVCLLFAGSAVAQCDNKTHIVDIPYAKNSSYFEGHYASLLDKLARDPQAGTGYLL CHHHHHHHHHHHCCHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEE LQFDVSQNQSSEEKRKYNKWLAERRIERVKNHLNKANYPAPVITRILTASNDATRSVSVV EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEE WCPDETDYQTIQVASKAE ECCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA