| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960552
Identifier: 157960552
GI number: 157960552
Start: 897237
End: 898313
Strand: Reverse
Name: 157960552
Synonym: Spea_0724
Alternate gene names: NA
Gene position: 898313-897237 (Counterclockwise)
Preceding gene: 157960559
Following gene: 157960549
Centisome position: 17.36
GC content: 39.46
Gene sequence:
>1077_bases ATGTGTAGATTTTTAGCCTTAATTATATGTCTGTCGATATCGCATAATATTTTTGCGAAGCAGCATATTCAAAGTTTAAA TGCCAAAGCCAAACATAAAACAGAAGTCATGATCTTAGGGAGTACACACCTCAATACAATTAAAGGTGAGCTAAACAGGG AAGAGTTTGTCCCCGTCATCCAAATGCTAGAAACATTTAACCCTACCGCTGTCGCTATCGAATCACTAAGGGCAGAAGAC ATAATTACTATGCTCAATGGCTCAGAAGAGTATCAAGAAGTTTTATCACAATTTGTCGGTGATACACTTTTGTCATTAGC AGGAAAAGAGCAGAAAGCTTTAGGGGTTTCAGCTCATGACGCGATTAACAAAATGAATAAATTGCTGACTAAAAACCAGT TTAGCCAGCAGAAAAGAATAGAGCTTATCAAGCTAGCTATAGCAGGCTACAACCGTGACACAGCGGCGCTTCACTGGAGT CTGTTAGATGCTAACATCCCTAACGATAGCCTTTCGAAAGAACTACAAGCATTTCTTCATAAGCAAACAAATCGTAACAA CGAAATAAATGTCATTGCAGTCGAATTAGCTGAAAGACTTAACCTAAATCGTTTATATCCTATTGACGATCATTTAGACA AAGACATGTACGGCAACATCGTCAGTGAGTTAATGCCGTCTTACCAAGAATCAACCTTTTGGGCTGAATTCCACTCAAGC GAATATATAACCAAACCCGAGAAATTAAAATCTCAAGCACTGGAGACAGGAGATTGGCTACCTCTGTTTTACTGGTTCAA TAGCGAAGAGTATCAATCTGACGTAATCAATAAGGAATGGTTAGGTTTTGTAGATAAAGATTTGGAGCCAAAATCTGCAC TGGCGAGAGTCGCCCTATGGGAGATACGGAACCTCAATATGGCTTCAAATATAATGCGGGTAGTCGCTGATCACGTTGGC GGTAGGCTTGTTATTATAATAGGAGCCAATCACAAGGTTTTCTTAGAGCAATACTTATCAAATATGGTCGGAGTCAATAT CGTGCAATTTGAAGATTACGCACCGATGAGGCATTAG
Upstream 100 bases:
>100_bases ACAACGCTTGTATGCACTTTACATCTTATCCAGCACTCTACAGTTTAAAACCCTAGCCAAACCTCATATATTGTAAAAAC ACAATCAAGGAGGACTGTCG
Downstream 100 bases:
>100_bases GTTAGGCTTTGCCTAACAACTAACGTCGCGGCGCTTCGCCCTACATTGGTAATGCATCAGGCTGCGCCTGACCAAAGTCA TTCAATAAGACTGCGTCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MCRFLALIICLSISHNIFAKQHIQSLNAKAKHKTEVMILGSTHLNTIKGELNREEFVPVIQMLETFNPTAVAIESLRAED IITMLNGSEEYQEVLSQFVGDTLLSLAGKEQKALGVSAHDAINKMNKLLTKNQFSQQKRIELIKLAIAGYNRDTAALHWS LLDANIPNDSLSKELQAFLHKQTNRNNEINVIAVELAERLNLNRLYPIDDHLDKDMYGNIVSELMPSYQESTFWAEFHSS EYITKPEKLKSQALETGDWLPLFYWFNSEEYQSDVINKEWLGFVDKDLEPKSALARVALWEIRNLNMASNIMRVVADHVG GRLVIIIGANHKVFLEQYLSNMVGVNIVQFEDYAPMRH
Sequences:
>Translated_358_residues MCRFLALIICLSISHNIFAKQHIQSLNAKAKHKTEVMILGSTHLNTIKGELNREEFVPVIQMLETFNPTAVAIESLRAED IITMLNGSEEYQEVLSQFVGDTLLSLAGKEQKALGVSAHDAINKMNKLLTKNQFSQQKRIELIKLAIAGYNRDTAALHWS LLDANIPNDSLSKELQAFLHKQTNRNNEINVIAVELAERLNLNRLYPIDDHLDKDMYGNIVSELMPSYQESTFWAEFHSS EYITKPEKLKSQALETGDWLPLFYWFNSEEYQSDVINKEWLGFVDKDLEPKSALARVALWEIRNLNMASNIMRVVADHVG GRLVIIIGANHKVFLEQYLSNMVGVNIVQFEDYAPMRH >Mature_358_residues MCRFLALIICLSISHNIFAKQHIQSLNAKAKHKTEVMILGSTHLNTIKGELNREEFVPVIQMLETFNPTAVAIESLRAED IITMLNGSEEYQEVLSQFVGDTLLSLAGKEQKALGVSAHDAINKMNKLLTKNQFSQQKRIELIKLAIAGYNRDTAALHWS LLDANIPNDSLSKELQAFLHKQTNRNNEINVIAVELAERLNLNRLYPIDDHLDKDMYGNIVSELMPSYQESTFWAEFHSS EYITKPEKLKSQALETGDWLPLFYWFNSEEYQSDVINKEWLGFVDKDLEPKSALARVALWEIRNLNMASNIMRVVADHVG GRLVIIIGANHKVFLEQYLSNMVGVNIVQFEDYAPMRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40873; Mature: 40873
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRFLALIICLSISHNIFAKQHIQSLNAKAKHKTEVMILGSTHLNTIKGELNREEFVPVI CHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHCCCCHHHHHHHH QMLETFNPTAVAIESLRAEDIITMLNGSEEYQEVLSQFVGDTLLSLAGKEQKALGVSAHD HHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHH AINKMNKLLTKNQFSQQKRIELIKLAIAGYNRDTAALHWSLLDANIPNDSLSKELQAFLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEECCCCCHHHHHHHHHHHH KQTNRNNEINVIAVELAERLNLNRLYPIDDHLDKDMYGNIVSELMPSYQESTFWAEFHSS HHCCCCCCEEEEEEEHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCC EYITKPEKLKSQALETGDWLPLFYWFNSEEYQSDVINKEWLGFVDKDLEPKSALARVALW CCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHCCCHHHHCHHCCCCCHHHHHHHHHHH EIRNLNMASNIMRVVADHVGGRLVIIIGANHKVFLEQYLSNMVGVNIVQFEDYAPMRH HHHCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCCCC >Mature Secondary Structure MCRFLALIICLSISHNIFAKQHIQSLNAKAKHKTEVMILGSTHLNTIKGELNREEFVPVI CHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHCCCCHHHHHHHH QMLETFNPTAVAIESLRAEDIITMLNGSEEYQEVLSQFVGDTLLSLAGKEQKALGVSAHD HHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHH AINKMNKLLTKNQFSQQKRIELIKLAIAGYNRDTAALHWSLLDANIPNDSLSKELQAFLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEECCCCCHHHHHHHHHHHH KQTNRNNEINVIAVELAERLNLNRLYPIDDHLDKDMYGNIVSELMPSYQESTFWAEFHSS HHCCCCCCEEEEEEEHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCC EYITKPEKLKSQALETGDWLPLFYWFNSEEYQSDVINKEWLGFVDKDLEPKSALARVALW CCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHCCCHHHHCHHCCCCCHHHHHHHHHHH EIRNLNMASNIMRVVADHVGGRLVIIIGANHKVFLEQYLSNMVGVNIVQFEDYAPMRH HHHCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA