| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is panC
Identifier: 157960521
GI number: 157960521
Start: 853642
End: 854493
Strand: Reverse
Name: panC
Synonym: Spea_0693
Alternate gene names: 157960521
Gene position: 854493-853642 (Counterclockwise)
Preceding gene: 157960522
Following gene: 157960520
Centisome position: 16.51
GC content: 47.07
Gene sequence:
>852_bases ATGATCACCACTCAATCTATTTCTGATATCCGCAAACAAGTAACTGCATGGCGACTAAAGGGCGAAACAGTTGCCTTTGT CCCAACTATGGGTAACTTGCACTTAGGGCATATCACCTTAGTTAAAGAAGCAAAGACACGTGCCGATCACGTGGTGGCTT CTATTTTTGTTAATCCAATGCAGTTTGGCCAAAACGAAGATCTCGACGCCTACCCAAGAACCTTAGCCGATGATCAAGCA GCGCTCATCGAAGCTGGCGCCGAGTTACTGTTCACCCCAACGCCGGATATCATCTACCCAAAAGGTATGGATGCGCAGAC CTTTGTTGAGGTGCCAAGCATTTCCGATGAACTCTGTGGCGCCAGTCGCCCGGGTCACTTCAGAGGCGTGGCGACCATAG TTTGCAAGCTGTTCAACATAGTACAGCCTGACATTGCAGTATTTGGCCAAAAAGACTTTCAGCAGTTATTAGTGATCCGC ACCATGGTAGAAGACTTATCTATGCCAATTGAGATTGTCGGCATCGAGACGATACGTGAAACCTCAGGCCTTGCCATGAG TTCTCGTAACGGCTACCTAACGACTGAACAAAAAGATCAGGCTTCGCAGATAAAACGCACCTTAAATAATATGGCCCTGT CGCTTAAAGCGGGCTTACTGATTAAGGATGTGGTCGCCAAGGCACAAGCAGAACTCGTGCATGTCGGCTTTAGAAACGAT TATCTCGATGTGAGAAACGCCAATACTTTTGCCATCGCAACGGCTGCAGATAAAGACTTGGTCATTTTAGTCGCCGCTTA CATGGGCTCGACACGACTAATTGATAATTTAGTGGTCAAGTTAGCCTACTAA
Upstream 100 bases:
>100_bases TCCCTGGTAGCGAGCACACCTTTAATTAATTTCTAATCATTCGCTCTCAGCCTATGGGTTGAGAGCCATTGTTTAAATTG AGTACCAGAGCAGTAAAACC
Downstream 100 bases:
>100_bases TATTAAGTTTGTTACAACAAAGCAATTTTAAGACAATTTTGCCTGCAAGAATTGAACGGTTCAAAATACAGTTTTGAGCC GTTTTTTATTGCCCTGCCAA
Product: pantoate--beta-alanine ligase
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MITTQSISDIRKQVTAWRLKGETVAFVPTMGNLHLGHITLVKEAKTRADHVVASIFVNPMQFGQNEDLDAYPRTLADDQA ALIEAGAELLFTPTPDIIYPKGMDAQTFVEVPSISDELCGASRPGHFRGVATIVCKLFNIVQPDIAVFGQKDFQQLLVIR TMVEDLSMPIEIVGIETIRETSGLAMSSRNGYLTTEQKDQASQIKRTLNNMALSLKAGLLIKDVVAKAQAELVHVGFRND YLDVRNANTFAIATAADKDLVILVAAYMGSTRLIDNLVVKLAY
Sequences:
>Translated_283_residues MITTQSISDIRKQVTAWRLKGETVAFVPTMGNLHLGHITLVKEAKTRADHVVASIFVNPMQFGQNEDLDAYPRTLADDQA ALIEAGAELLFTPTPDIIYPKGMDAQTFVEVPSISDELCGASRPGHFRGVATIVCKLFNIVQPDIAVFGQKDFQQLLVIR TMVEDLSMPIEIVGIETIRETSGLAMSSRNGYLTTEQKDQASQIKRTLNNMALSLKAGLLIKDVVAKAQAELVHVGFRND YLDVRNANTFAIATAADKDLVILVAAYMGSTRLIDNLVVKLAY >Mature_283_residues MITTQSISDIRKQVTAWRLKGETVAFVPTMGNLHLGHITLVKEAKTRADHVVASIFVNPMQFGQNEDLDAYPRTLADDQA ALIEAGAELLFTPTPDIIYPKGMDAQTFVEVPSISDELCGASRPGHFRGVATIVCKLFNIVQPDIAVFGQKDFQQLLVIR TMVEDLSMPIEIVGIETIRETSGLAMSSRNGYLTTEQKDQASQIKRTLNNMALSLKAGLLIKDVVAKAQAELVHVGFRND YLDVRNANTFAIATAADKDLVILVAAYMGSTRLIDNLVVKLAY
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
COG id: COG0414
COG function: function code H; Panthothenate synthetase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pantothenate synthetase family
Homologues:
Organism=Escherichia coli, GI1786325, Length=283, Percent_Identity=51.9434628975265, Blast_Score=289, Evalue=1e-79, Organism=Saccharomyces cerevisiae, GI6322046, Length=302, Percent_Identity=37.4172185430464, Blast_Score=179, Evalue=4e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PANC_SHEPA (A8H0D3)
Other databases:
- EMBL: CP000851 - RefSeq: YP_001500555.1 - ProteinModelPortal: A8H0D3 - SMR: A8H0D3 - STRING: A8H0D3 - GeneID: 5661092 - GenomeReviews: CP000851_GR - KEGG: spl:Spea_0693 - NMPDR: fig|398579.3.peg.610 - eggNOG: COG0414 - HOGENOM: HBG428839 - OMA: RLIDNFT - ProtClustDB: PRK00380 - BioCyc: SPEA398579:SPEA_0693-MONOMER - GO: GO:0005737 - HAMAP: MF_00158 - InterPro: IPR004821 - InterPro: IPR003721 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR21299:SF1 - TIGRFAMs: TIGR00125 - TIGRFAMs: TIGR00018
Pfam domain/function: PF02569 Pantoate_ligase
EC number: =6.3.2.1
Molecular weight: Translated: 31022; Mature: 31022
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: ACT_SITE 37-37 BINDING 61-61 BINDING 61-61 BINDING 155-155 BINDING 178-178
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITTQSISDIRKQVTAWRLKGETVAFVPTMGNLHLGHITLVKEAKTRADHVVASIFVNPM CCCCCHHHHHHHHHHHHEECCCEEEEEECCCCEEECEEEEEHHHHHHHHHHHHHHHHCHH QFGQNEDLDAYPRTLADDQAALIEAGAELLFTPTPDIIYPKGMDAQTFVEVPSISDELCG HCCCCCCCCCCCCHHCCCHHHHHHCCCCEEEECCCCEECCCCCCHHHEEECCCCCHHHCC ASRPGHFRGVATIVCKLFNIVQPDIAVFGQKDFQQLLVIRTMVEDLSMPIEIVGIETIRE CCCCCCHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHH TSGLAMSSRNGYLTTEQKDQASQIKRTLNNMALSLKAGLLIKDVVAKAQAELVHVGFRND CCCCEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCC YLDVRNANTFAIATAADKDLVILVAAYMGSTRLIDNLVVKLAY EEEECCCCEEEEEEECCCCEEEEEEHHHCCHHHHHHHHHHCCC >Mature Secondary Structure MITTQSISDIRKQVTAWRLKGETVAFVPTMGNLHLGHITLVKEAKTRADHVVASIFVNPM CCCCCHHHHHHHHHHHHEECCCEEEEEECCCCEEECEEEEEHHHHHHHHHHHHHHHHCHH QFGQNEDLDAYPRTLADDQAALIEAGAELLFTPTPDIIYPKGMDAQTFVEVPSISDELCG HCCCCCCCCCCCCHHCCCHHHHHHCCCCEEEECCCCEECCCCCCHHHEEECCCCCHHHCC ASRPGHFRGVATIVCKLFNIVQPDIAVFGQKDFQQLLVIRTMVEDLSMPIEIVGIETIRE CCCCCCHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHH TSGLAMSSRNGYLTTEQKDQASQIKRTLNNMALSLKAGLLIKDVVAKAQAELVHVGFRND CCCCEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCC YLDVRNANTFAIATAADKDLVILVAAYMGSTRLIDNLVVKLAY EEEECCCCEEEEEEECCCCEEEEEEHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA