| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960520
Identifier: 157960520
GI number: 157960520
Start: 852786
End: 853292
Strand: Reverse
Name: 157960520
Synonym: Spea_0692
Alternate gene names: NA
Gene position: 853292-852786 (Counterclockwise)
Preceding gene: 157960521
Following gene: 157960519
Centisome position: 16.49
GC content: 41.62
Gene sequence:
>507_bases ATGGCGAAAGTTATTTCCACTTTTCTATGCCTCGCTATTGCGGGTTCTGCGCAGGCAAGCAGTATTTTCAAGTGCATAAA AGACGACAAAATTGTCTTTAGTCAACAGTCATGCCCTGCAGAATTTCGCCAGCATAAAATTGAATACCAACTAGGGATCA CCACAGAAACCGATTCCGATAAACGCATTAAAACCCAAGATCCGCTACAAGCTCTGCTCAACAAAAAAACCATCTCAAAG AAGCGTTTATTACAGCTGCTAGATAGCGAAGTGTATCGACTGCGCCAAGAAAATAGTTATTACGAAATACTCAGAGCCAG TGAACTGCAAAAACTGGATCGCGACCGCTATTGGCAGAAAAAAGCCCCTAGCGATCCTGAATACCAGGAATCTATCAAAG AGATGAATCAGCACTTTGACCAGCTTGTAAAGGTTAACTCAGGTACCATTGAGTTACTCAATGTTAGAAAACAGCAGATA GAAAAAGAGACGGCTGAGATATACTAA
Upstream 100 bases:
>100_bases TGTTAAATAACAACAACGAATGATTATTGCTCGATGCAATCTTGCTGTTATCAGCTAAGCATTTTTATCAACTAAACGGT CAATAAGGATAGTTAGCCGG
Downstream 100 bases:
>100_bases GCCTCCAGACCCGACTGCTACATTGATAGCACAGCCGTCTCACACGATTACGTCTGCAAGCTTACTCAAGGAGGCGAGCT GCTTTTGAATATCCACTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MAKVISTFLCLAIAGSAQASSIFKCIKDDKIVFSQQSCPAEFRQHKIEYQLGITTETDSDKRIKTQDPLQALLNKKTISK KRLLQLLDSEVYRLRQENSYYEILRASELQKLDRDRYWQKKAPSDPEYQESIKEMNQHFDQLVKVNSGTIELLNVRKQQI EKETAEIY
Sequences:
>Translated_168_residues MAKVISTFLCLAIAGSAQASSIFKCIKDDKIVFSQQSCPAEFRQHKIEYQLGITTETDSDKRIKTQDPLQALLNKKTISK KRLLQLLDSEVYRLRQENSYYEILRASELQKLDRDRYWQKKAPSDPEYQESIKEMNQHFDQLVKVNSGTIELLNVRKQQI EKETAEIY >Mature_167_residues AKVISTFLCLAIAGSAQASSIFKCIKDDKIVFSQQSCPAEFRQHKIEYQLGITTETDSDKRIKTQDPLQALLNKKTISKK RLLQLLDSEVYRLRQENSYYEILRASELQKLDRDRYWQKKAPSDPEYQESIKEMNQHFDQLVKVNSGTIELLNVRKQQIE KETAEIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19622; Mature: 19490
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVISTFLCLAIAGSAQASSIFKCIKDDKIVFSQQSCPAEFRQHKIEYQLGITTETDSD CHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHEECCCCCCCCC KRIKTQDPLQALLNKKTISKKRLLQLLDSEVYRLRQENSYYEILRASELQKLDRDRYWQK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH KAPSDPEYQESIKEMNQHFDQLVKVNSGTIELLNVRKQQIEKETAEIY CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKVISTFLCLAIAGSAQASSIFKCIKDDKIVFSQQSCPAEFRQHKIEYQLGITTETDSD HHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHEECCCCCCCCC KRIKTQDPLQALLNKKTISKKRLLQLLDSEVYRLRQENSYYEILRASELQKLDRDRYWQK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH KAPSDPEYQESIKEMNQHFDQLVKVNSGTIELLNVRKQQIEKETAEIY CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA