| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is napH [H]
Identifier: 157960450
GI number: 157960450
Start: 764293
End: 765189
Strand: Reverse
Name: napH [H]
Synonym: Spea_0621
Alternate gene names: 157960450
Gene position: 765189-764293 (Counterclockwise)
Preceding gene: 157960451
Following gene: 157960449
Centisome position: 14.79
GC content: 49.5
Gene sequence:
>897_bases ATGAGCCAGACACTAAAGCAAAAACCGACAACACATGGCTTTGCTAGAGCGGCAATTAAAGAGCTTGGATGGTGGCGTGC CCACAAATTCCTGTTCCTTCGTCGCCTTAGCCAAGTCAGTGTCTTTGCATTGTTTGCCATTGGCCCTTTGTTCGGACTCT GGTTACTTAAAGGTAACCTCTCAGCCAGCGAACTCTTCGGTGTTGTGCCTCTATCGGATCCACTTGCTACCTTGCAGGTG TTGATGACAGGCCATCTACCCGAGCTAAGCTTAATACTTGGCGCCGTGATTATCGCACTGCTGTATGCAGTGCTTGGCGG CCGAGTATTTTGTAGCTGGGTCTGCCCCGTGAACATGGTGACAGACTTAGCAAGCTGGCTACGACGTAAAATGAACTTGC CTCGCACCTCTGAGATGCCAAGAAACTTACGTTACTACCTGCTAGCGCTTGTGCTCATACTGCCAATACTTACCGGCATG GCTGTCTGGGAATGGGTTAATCCCGTCCCGGTACTGTATCGTGCCGCTTTGTTTAGTGCTGGCAGTGGTTTATGGGTCTT GGCCGCCATCTTCTTACTGGATCTATTTATCAGTGAGAGAGCTTGGTGCGGACACCTGTGCCCAACGGGGGCACTATTTG GCCTTCTCGGTAAAATCAGTCCGATAAAAGTATCTGCGGTAAATGCAAAAGATTGCGATAACTGTATGGATTGTTTTGTG GTCTGCCCTGAAAGACAGGTATTAAAGCCTGCCCTCAAAGGCAAGCAGCCCATGATAACCGACAGTGATTGCACTCAATG CGGCCGCTGTATCGACGTTTGCGCCCAACGCGTTTTCCAGTTTCAGAATCGAAAGTATCAAAATCGAATTGCCCTAAAGG CGGAGAACAACCAATGA
Upstream 100 bases:
>100_bases TGTTACCGACTCATATTGCTTTAGGTAAAACAGCTTCTCACGATACCTATATCAACACCGAAGAGACCACGCTTGAGATG TTAAACAAGGGGCTTGCATT
Downstream 100 bases:
>100_bases AAAAAGTACTCACCTTAGCTGCGCTAGTGATGGCGCTTAGTGCTTGCTCTGGTCAGCAAGCGAACACTCAAGCCGAGCCT GTTAACATCAGCTCACTCGG
Product: quinol dehydrogenase membrane component
Products: reduced acceptor; NO3- [C]
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSQTLKQKPTTHGFARAAIKELGWWRAHKFLFLRRLSQVSVFALFAIGPLFGLWLLKGNLSASELFGVVPLSDPLATLQV LMTGHLPELSLILGAVIIALLYAVLGGRVFCSWVCPVNMVTDLASWLRRKMNLPRTSEMPRNLRYYLLALVLILPILTGM AVWEWVNPVPVLYRAALFSAGSGLWVLAAIFLLDLFISERAWCGHLCPTGALFGLLGKISPIKVSAVNAKDCDNCMDCFV VCPERQVLKPALKGKQPMITDSDCTQCGRCIDVCAQRVFQFQNRKYQNRIALKAENNQ
Sequences:
>Translated_298_residues MSQTLKQKPTTHGFARAAIKELGWWRAHKFLFLRRLSQVSVFALFAIGPLFGLWLLKGNLSASELFGVVPLSDPLATLQV LMTGHLPELSLILGAVIIALLYAVLGGRVFCSWVCPVNMVTDLASWLRRKMNLPRTSEMPRNLRYYLLALVLILPILTGM AVWEWVNPVPVLYRAALFSAGSGLWVLAAIFLLDLFISERAWCGHLCPTGALFGLLGKISPIKVSAVNAKDCDNCMDCFV VCPERQVLKPALKGKQPMITDSDCTQCGRCIDVCAQRVFQFQNRKYQNRIALKAENNQ >Mature_297_residues SQTLKQKPTTHGFARAAIKELGWWRAHKFLFLRRLSQVSVFALFAIGPLFGLWLLKGNLSASELFGVVPLSDPLATLQVL MTGHLPELSLILGAVIIALLYAVLGGRVFCSWVCPVNMVTDLASWLRRKMNLPRTSEMPRNLRYYLLALVLILPILTGMA VWEWVNPVPVLYRAALFSAGSGLWVLAAIFLLDLFISERAWCGHLCPTGALFGLLGKISPIKVSAVNAKDCDNCMDCFVV CPERQVLKPALKGKQPMITDSDCTQCGRCIDVCAQRVFQFQNRKYQNRIALKAENNQ
Specific function: Involved in electron transfer [H]
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Escherichia coli, GI1788532, Length=272, Percent_Identity=50.3676470588235, Blast_Score=286, Evalue=9e-79, Organism=Escherichia coli, GI1787226, Length=267, Percent_Identity=25.4681647940075, Blast_Score=84, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR011886 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33209; Mature: 33078
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTLKQKPTTHGFARAAIKELGWWRAHKFLFLRRLSQVSVFALFAIGPLFGLWLLKGNL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SASELFGVVPLSDPLATLQVLMTGHLPELSLILGAVIIALLYAVLGGRVFCSWVCPVNMV CHHHHEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHEEHHHCHHHHH TDLASWLRRKMNLPRTSEMPRNLRYYLLALVLILPILTGMAVWEWVNPVPVLYRAALFSA HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC GSGLWVLAAIFLLDLFISERAWCGHLCPTGALFGLLGKISPIKVSAVNAKDCDNCMDCFV CCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH VCPERQVLKPALKGKQPMITDSDCTQCGRCIDVCAQRVFQFQNRKYQNRIALKAENNQ CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCC >Mature Secondary Structure SQTLKQKPTTHGFARAAIKELGWWRAHKFLFLRRLSQVSVFALFAIGPLFGLWLLKGNL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SASELFGVVPLSDPLATLQVLMTGHLPELSLILGAVIIALLYAVLGGRVFCSWVCPVNMV CHHHHEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHEEHHHCHHHHH TDLASWLRRKMNLPRTSEMPRNLRYYLLALVLILPILTGMAVWEWVNPVPVLYRAALFSA HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC GSGLWVLAAIFLLDLFISERAWCGHLCPTGALFGLLGKISPIKVSAVNAKDCDNCMDCFV CCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH VCPERQVLKPALKGKQPMITDSDCTQCGRCIDVCAQRVFQFQNRKYQNRIALKAENNQ CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acceptor; nitrite [C]
Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]