| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is napG [H]
Identifier: 157960451
GI number: 157960451
Start: 765186
End: 765920
Strand: Reverse
Name: napG [H]
Synonym: Spea_0622
Alternate gene names: 157960451
Gene position: 765920-765186 (Counterclockwise)
Preceding gene: 157960452
Following gene: 157960450
Centisome position: 14.8
GC content: 48.84
Gene sequence:
>735_bases ATGAGTACGGTCGATCAACGTAAGTTCGCAGCCAAAGGCGTTAATCGCCGCCAGTTTTTAGCCACATCGGCAAAAGCTAG CTGCGCAATGGGCTTGCTAGGAATGGGTTTAACGGCAGTTGCTAAGCAATCTAGTCAGTTAGACTCGCTCGCGATTCGAC CGCCAGGTGCATTAAGTGAACAAGATTTTCTCTCGGCCTGCGTACGCTGTGGTCTATGCGTAGAAGCCTGCCCTTATGAC ACCCTGAAACTGGCTCGCTGGTTTCAGGGTGCCCCAACCGGCACGCCCTACTTTACCGCACGCAAGATCCCCTGTGAGAT GTGTGAAGATATCCCTTGTGTTAAAGCTTGCCCCTCTGGCTCGCTTGACCAGAGTTTGACGGATATTGACGAATCTAAAA TGGGTATTGCTGTACTGATCGATGAGAAAAACTGCCTTAACTTTAAAGGATTGAGATGCGACGTTTGTTACCGGGCCTGC CCGCTAATCGATGATGCTATCACCCTTGAGATGCAGCACAATGAACGCAGTGGTCACCACGCCATGTTCCTACCAACAGT TAACAGCGATAGCTGCACTGGCTGTGGAAAATGTGAACATGTGTGTGTATTAGAAGAACCTGCGATCAAGGTGTTACCGA CTCATATTGCTTTAGGTAAAACAGCTTCTCACGATACCTATATCAACACCGAAGAGACCACGCTTGAGATGTTAAACAAG GGGCTTGCATTATGA
Upstream 100 bases:
>100_bases AGACTTCAAGAAGTGTCCAGTTAAAGTGATGAAAGCGTAAGCCTTTCACTAACAAATTTAACTTTAATCGCTTAAGCAAA AGCGGAGAAGAGATAAGCAA
Downstream 100 bases:
>100_bases GCCAGACACTAAAGCAAAAACCGACAACACATGGCTTTGCTAGAGCGGCAATTAAAGAGCTTGGATGGTGGCGTGCCCAC AAATTCCTGTTCCTTCGTCG
Product: quinol dehydrogenase periplasmic component
Products: reduced acceptor; NO3- [C]
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSTVDQRKFAAKGVNRRQFLATSAKASCAMGLLGMGLTAVAKQSSQLDSLAIRPPGALSEQDFLSACVRCGLCVEACPYD TLKLARWFQGAPTGTPYFTARKIPCEMCEDIPCVKACPSGSLDQSLTDIDESKMGIAVLIDEKNCLNFKGLRCDVCYRAC PLIDDAITLEMQHNERSGHHAMFLPTVNSDSCTGCGKCEHVCVLEEPAIKVLPTHIALGKTASHDTYINTEETTLEMLNK GLAL
Sequences:
>Translated_244_residues MSTVDQRKFAAKGVNRRQFLATSAKASCAMGLLGMGLTAVAKQSSQLDSLAIRPPGALSEQDFLSACVRCGLCVEACPYD TLKLARWFQGAPTGTPYFTARKIPCEMCEDIPCVKACPSGSLDQSLTDIDESKMGIAVLIDEKNCLNFKGLRCDVCYRAC PLIDDAITLEMQHNERSGHHAMFLPTVNSDSCTGCGKCEHVCVLEEPAIKVLPTHIALGKTASHDTYINTEETTLEMLNK GLAL >Mature_243_residues STVDQRKFAAKGVNRRQFLATSAKASCAMGLLGMGLTAVAKQSSQLDSLAIRPPGALSEQDFLSACVRCGLCVEACPYDT LKLARWFQGAPTGTPYFTARKIPCEMCEDIPCVKACPSGSLDQSLTDIDESKMGIAVLIDEKNCLNFKGLRCDVCYRACP LIDDAITLEMQHNERSGHHAMFLPTVNSDSCTGCGKCEHVCVLEEPAIKVLPTHIALGKTASHDTYINTEETTLEMLNKG LAL
Specific function: Involved in electron transfer (Probable) [H]
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Escherichia coli, GI1788533, Length=213, Percent_Identity=58.6854460093897, Blast_Score=276, Evalue=7e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR004494 - InterPro: IPR006311 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26385; Mature: 26254
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 7.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 9.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVDQRKFAAKGVNRRQFLATSAKASCAMGLLGMGLTAVAKQSSQLDSLAIRPPGALSE CCCHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCEEECCCCCCCH QDFLSACVRCGLCVEACPYDTLKLARWFQGAPTGTPYFTARKIPCEMCEDIPCVKACPSG HHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCCCCCCEEECCCCHHHHCCCCCHHCCCCC SLDQSLTDIDESKMGIAVLIDEKNCLNFKGLRCDVCYRACPLIDDAITLEMQHNERSGHH CCHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEHHHHHHCCCCCCEEEEEEECCCCCCCE AMFLPTVNSDSCTGCGKCEHVCVLEEPAIKVLPTHIALGKTASHDTYINTEETTLEMLNK EEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECHHEECCCCCCCCEECCHHHHHHHHHC GLAL CCCC >Mature Secondary Structure STVDQRKFAAKGVNRRQFLATSAKASCAMGLLGMGLTAVAKQSSQLDSLAIRPPGALSE CCHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCEEECCCCCCCH QDFLSACVRCGLCVEACPYDTLKLARWFQGAPTGTPYFTARKIPCEMCEDIPCVKACPSG HHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCCCCCCEEECCCCHHHHCCCCCHHCCCCC SLDQSLTDIDESKMGIAVLIDEKNCLNFKGLRCDVCYRACPLIDDAITLEMQHNERSGHH CCHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEHHHHHHCCCCCCEEEEEEECCCCCCCE AMFLPTVNSDSCTGCGKCEHVCVLEEPAIKVLPTHIALGKTASHDTYINTEETTLEMLNK EEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECHHEECCCCCCCCEECCHHHHHHHHHC GLAL CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acceptor; nitrite [C]
Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]