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The map label for this gene is rfbD [H]

Identifier: 157960437

GI number: 157960437

Start: 750412

End: 751557

Strand: Reverse

Name: rfbD [H]

Synonym: Spea_0608

Alternate gene names: 157960437

Gene position: 751557-750412 (Counterclockwise)

Preceding gene: 157960444

Following gene: 157960436

Centisome position: 14.52

GC content: 43.19

Gene sequence:

>1146_bases
ATGAATCTTAAAATTGGAATAGCCGGCGCTGGATTCTCTGGTGCTGTTATCGCAAATGAGCTTGCCAAAGCTGGCCATCA
AATAACTGTTTTTGAACCTCGAAAACACATTGCGGGTAATTGCTATTCATCGCGAGATGATGAAAGCAACATCATGCAGC
ATCACTTTGGCCCACATATTTTCCATACAGATAAAGCGCATATCTGGGAATACGTCACTCGGCTTGGTCAAATGATGCCA
TTTACCAACAGAGTAAAAGCCATGAGCCAAGGACAGGTCTATTCATTGCCAATCAATCTGCATACCATCAATCAGTTTTT
TAACGCGCAGATGTCCCCCTCTGAAGCCAAAGAGTTCATCGCATGTAAGGCAGACTCGAGTATAAAACAGCCACAAAACT
TTGAGGAGCAAGCCCATAAACTCATTGGTGAGCAGCTGTATCAGGCTTTCTTCAAAGACTATACGATAAAGCAATGGGGA
CGTTCACCAGATACACTACCAGCGAGTATTTTAAAGCGACTACCCGTTAGGTTTAATTACGATGATAACTATTTCAACCA
CCCGTTTCAGGGCATGCCAATTGAAGGGTACACCCCGTTAATACAGAAATTACTCGACCACCCAAACATCACCCTACGAC
TCAATTCGACGTTCGATGCCACCATGAAAAACCAATATGCTCACGTGTTTTTCTCTGGGCCGTTAGACGCTTATTTTGAC
TATAAGCTCGGCAAGCTGCCCTATAGAACATTAGACTTCCATAAAGAAGTCCATGAAGGTGATTATCAGGGAAACGCTGT
GGTTAATTATTGCGATAATAGCCAAGCCTATACTCGGATCAGTGAGCATAAGCACTTTACCCCTTGGGAATCACACTCTA
GTACCGTGATCTTTAAAGAATACAGCCGAGAAGCTACGGCTGAAGATACTCCCTACTACCCAGTAAGACTAAGTGATGAT
AACACCTTACTAGATCAATATGTTGAGCTTGCCAAGCAACAGAAAAATATCACCTTTGTTGGCCGATTGGGCACCTATCG
TTACCTCGATATGGACACCAGCATAGATGAAGCACTAACCGCCAGTAAGCTTTTTTTAGAAGCATTGAGTACCCAGAAAA
CAATGCCCGTTTTTACAGCACAATAG

Upstream 100 bases:

>100_bases
GCAAAAAGTAAAATTCAATTAAAGAAGATTTTTTAGACAAAAAATATAATCAGATAATGTAAACTGCTTACCTGCTTAAC
TAACTGCTAATGCTGAATAG

Downstream 100 bases:

>100_bases
ATAGATTTATAGAGTCAGTAGATATGAAAAGATTTTTAGTCATTGCTCGAGTAGGTGACAACTCCCTACATACATATTGG
TTAGAAAATGCAGCGCCTAG

Product: UDP-galactopyranose mutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MNLKIGIAGAGFSGAVIANELAKAGHQITVFEPRKHIAGNCYSSRDDESNIMQHHFGPHIFHTDKAHIWEYVTRLGQMMP
FTNRVKAMSQGQVYSLPINLHTINQFFNAQMSPSEAKEFIACKADSSIKQPQNFEEQAHKLIGEQLYQAFFKDYTIKQWG
RSPDTLPASILKRLPVRFNYDDNYFNHPFQGMPIEGYTPLIQKLLDHPNITLRLNSTFDATMKNQYAHVFFSGPLDAYFD
YKLGKLPYRTLDFHKEVHEGDYQGNAVVNYCDNSQAYTRISEHKHFTPWESHSSTVIFKEYSREATAEDTPYYPVRLSDD
NTLLDQYVELAKQQKNITFVGRLGTYRYLDMDTSIDEALTASKLFLEALSTQKTMPVFTAQ

Sequences:

>Translated_381_residues
MNLKIGIAGAGFSGAVIANELAKAGHQITVFEPRKHIAGNCYSSRDDESNIMQHHFGPHIFHTDKAHIWEYVTRLGQMMP
FTNRVKAMSQGQVYSLPINLHTINQFFNAQMSPSEAKEFIACKADSSIKQPQNFEEQAHKLIGEQLYQAFFKDYTIKQWG
RSPDTLPASILKRLPVRFNYDDNYFNHPFQGMPIEGYTPLIQKLLDHPNITLRLNSTFDATMKNQYAHVFFSGPLDAYFD
YKLGKLPYRTLDFHKEVHEGDYQGNAVVNYCDNSQAYTRISEHKHFTPWESHSSTVIFKEYSREATAEDTPYYPVRLSDD
NTLLDQYVELAKQQKNITFVGRLGTYRYLDMDTSIDEALTASKLFLEALSTQKTMPVFTAQ
>Mature_381_residues
MNLKIGIAGAGFSGAVIANELAKAGHQITVFEPRKHIAGNCYSSRDDESNIMQHHFGPHIFHTDKAHIWEYVTRLGQMMP
FTNRVKAMSQGQVYSLPINLHTINQFFNAQMSPSEAKEFIACKADSSIKQPQNFEEQAHKLIGEQLYQAFFKDYTIKQWG
RSPDTLPASILKRLPVRFNYDDNYFNHPFQGMPIEGYTPLIQKLLDHPNITLRLNSTFDATMKNQYAHVFFSGPLDAYFD
YKLGKLPYRTLDFHKEVHEGDYQGNAVVNYCDNSQAYTRISEHKHFTPWESHSSTVIFKEYSREATAEDTPYYPVRLSDD
NTLLDQYVELAKQQKNITFVGRLGTYRYLDMDTSIDEALTASKLFLEALSTQKTMPVFTAQ

Specific function: Involved in the conversion of UDP-GalP into UDP-GalF through a 2-keto intermediate [H]

COG id: COG0562

COG function: function code M; UDP-galactopyranose mutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788348, Length=360, Percent_Identity=44.7222222222222, Blast_Score=301, Evalue=4e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR016040
- InterPro:   IPR004379
- InterPro:   IPR015899 [H]

Pfam domain/function: PF01266 DAO; PF03275 GLF [H]

EC number: =5.4.99.9 [H]

Molecular weight: Translated: 43762; Mature: 43762

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKIGIAGAGFSGAVIANELAKAGHQITVFEPRKHIAGNCYSSRDDESNIMQHHFGPHI
CCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCCHHHHHHHHCCCCE
FHTDKAHIWEYVTRLGQMMPFTNRVKAMSQGQVYSLPINLHTINQFFNAQMSPSEAKEFI
EECCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEHHHHHHHHCCCCCHHHHHHEE
ACKADSSIKQPQNFEEQAHKLIGEQLYQAFFKDYTIKQWGRSPDTLPASILKRLPVRFNY
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHCCCEECC
DDNYFNHPFQGMPIEGYTPLIQKLLDHPNITLRLNSTFDATMKNQYAHVFFSGPLDAYFD
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCHHCCCEEEEEECCCCCHHCC
YKLGKLPYRTLDFHKEVHEGDYQGNAVVNYCDNSQAYTRISEHKHFTPWESHSSTVIFKE
CCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEEE
YSREATAEDTPYYPVRLSDDNTLLDQYVELAKQQKNITFVGRLGTYRYLDMDTSIDEALT
CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCHHHHHH
ASKLFLEALSTQKTMPVFTAQ
HHHHHHHHHHCCCCCCEEECC
>Mature Secondary Structure
MNLKIGIAGAGFSGAVIANELAKAGHQITVFEPRKHIAGNCYSSRDDESNIMQHHFGPHI
CCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCCHHHHHHHHCCCCE
FHTDKAHIWEYVTRLGQMMPFTNRVKAMSQGQVYSLPINLHTINQFFNAQMSPSEAKEFI
EECCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEHHHHHHHHCCCCCHHHHHHEE
ACKADSSIKQPQNFEEQAHKLIGEQLYQAFFKDYTIKQWGRSPDTLPASILKRLPVRFNY
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHCCCEECC
DDNYFNHPFQGMPIEGYTPLIQKLLDHPNITLRLNSTFDATMKNQYAHVFFSGPLDAYFD
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCHHCCCEEEEEECCCCCHHCC
YKLGKLPYRTLDFHKEVHEGDYQGNAVVNYCDNSQAYTRISEHKHFTPWESHSSTVIFKE
CCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEEE
YSREATAEDTPYYPVRLSDDNTLLDQYVELAKQQKNITFVGRLGTYRYLDMDTSIDEALT
CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCHHHHHH
ASKLFLEALSTQKTMPVFTAQ
HHHHHHHHHHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7559323 [H]