| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960444
Identifier: 157960444
GI number: 157960444
Start: 759612
End: 759941
Strand: Reverse
Name: 157960444
Synonym: Spea_0615
Alternate gene names: NA
Gene position: 759941-759612 (Counterclockwise)
Preceding gene: 157960445
Following gene: 157960437
Centisome position: 14.69
GC content: 42.42
Gene sequence:
>330_bases ATGTCACTTGCTATCATCCTATTTTCAGGTAACGTTAGAGCAAGAGTAATTGACATAAGAAGCGTCACTATGAAGTCAGG TAAGCACGATGCACAACTACTTAAGCTCGCGATGGAAATTGGTGTAGGCTACGCCAAGAAGAGAGGTTTTGCCGATTTTG GTCAAGGGATCTCACCCAAAGATAAGGTCGAATGTATCTATCGTTTGCTGGTGCAAGATAACCTTATTCAAGCACTCCCC AAAGATAAAGAAGATGGCCCGAATATGAAACATAAATTGATTTTGTGGATCAGCCGTCAGTTGCCAGCAGAGCATGAACT GCTCAACTAA
Upstream 100 bases:
>100_bases GTCGCCATTGCAATATCGACAGAAAAACAACCCTAAATAATTGCTATCTATTGATAACAAACCCGAAATTTCAATAGATT AAACTACTTTTATCGGCGCG
Downstream 100 bases:
>100_bases ATCAGTACAGCTGCAAATAAGATAGAGGCTAATGAACTCGCTTAAACGCTATGTTCATTAGCCTGTGCTCTTTAGCTTAT GTTATTAGCCAAGCTTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSLAIILFSGNVRARVIDIRSVTMKSGKHDAQLLKLAMEIGVGYAKKRGFADFGQGISPKDKVECIYRLLVQDNLIQALP KDKEDGPNMKHKLILWISRQLPAEHELLN
Sequences:
>Translated_109_residues MSLAIILFSGNVRARVIDIRSVTMKSGKHDAQLLKLAMEIGVGYAKKRGFADFGQGISPKDKVECIYRLLVQDNLIQALP KDKEDGPNMKHKLILWISRQLPAEHELLN >Mature_108_residues SLAIILFSGNVRARVIDIRSVTMKSGKHDAQLLKLAMEIGVGYAKKRGFADFGQGISPKDKVECIYRLLVQDNLIQALPK DKEDGPNMKHKLILWISRQLPAEHELLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12255; Mature: 12123
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAIILFSGNVRARVIDIRSVTMKSGKHDAQLLKLAMEIGVGYAKKRGFADFGQGISPK CCEEEEEEECCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHCCCCHHHCCCCCCH DKVECIYRLLVQDNLIQALPKDKEDGPNMKHKLILWISRQLPAEHELLN HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC >Mature Secondary Structure SLAIILFSGNVRARVIDIRSVTMKSGKHDAQLLKLAMEIGVGYAKKRGFADFGQGISPK CEEEEEEECCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHCCCCHHHCCCCCCH DKVECIYRLLVQDNLIQALPKDKEDGPNMKHKLILWISRQLPAEHELLN HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA