| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960432
Identifier: 157960432
GI number: 157960432
Start: 740862
End: 742022
Strand: Reverse
Name: 157960432
Synonym: Spea_0603
Alternate gene names: NA
Gene position: 742022-740862 (Counterclockwise)
Preceding gene: 157960433
Following gene: 157960431
Centisome position: 14.34
GC content: 48.32
Gene sequence:
>1161_bases ATGACTACTCTCAGCACAGCAATGCTTGCTTGCGCTATTACCTCATTAACGTTAATCCAACCCGCTTTTGCAAAGCTTGA TGTTGAGGAGAGCCGTCTAGCAACTGCAACCCAAGCTATGCCTAATGTGGTCAGTCGCTATCAAGCCTTTGTCAGTAATT TAGGCGAGAAATACAGCCAACACGACGATGAGCTTAAAGTCACCCAGATGGTGGTTCACCAAGGGCTTAGGTTATGGCAA CAAGCAGTAAGAGATGTGCAATCAGGCCATTTGGATGATCGCTCTCTATATTGGAATCGCTTAGCGATGCGCGAGCTGCT CAAGACCGATGAACCCGACTTCAATATTGCGGCCTGGCAACAAGATATTTTGCTTAAAGCCGTCGAAAAGTCATCACGAG GCTTTAGCGATCTCCACTTCAAAGATGATGCCCAAATAAAAATTCTCCTCACCGGCTTCGACCCTTTCTTTCTTGATCGT AATATCGACCAGAGCAATCCCTCTGGACTCGCGGCGTTGGCACTAGACGGTTACCGCTTTAAAGTCGATGGCAAACAAGC GCAAATTGAAACCGTGATGATCCCAGTGCGCTTTGCCGATTTTGATGAGGGCATGATTGAGTCCCTGCTCACGCCTATCT ATCGTGATAATAGCGTGGACATGATCTTTACCGTCAGCATGGGGCGTGATGATTTTGACATCGAACGCTTCCCAGGCCGT AATCGCAGCGCCGCCGCACCGGACAACCTCAACGTACTAACAGGTGCAAACAAACAGGCTCCGATAGCGCCAAAATTTAA TGGCGGCAGTTTAAATGGTCCCGAGTTTGTTGAGTTCTCCTTGCCTGTTACTGTAATGCAAACGGTAAAAGGCCCGTGGA AAGTCAATGACAATCACACTGTATCGACGTTAGAACGTGGTGAGTTTGAAGCAAGCTCTCTCGCTCAATTACAAGGCGCA ACATCGGTAGAAGGTTCTGGCGGTGGTTACTTGTCGAATGAGATCTCTTATCGTGCCATCTTGCTGCAAAAGCAATTTAA TAGCAGCATCCCCGTTGGTCATATCCATACTCCGCGTATCGCCGCCTACGACGTCAAAATCGAGAGCGACATCGTCAAGC AGGTACAAGAGATGGTAGTCGCAGCAGCGGGTACACTTTAA
Upstream 100 bases:
>100_bases ACAACACATACCTTGGAACACAATATAAAACTGCTACCTACCTGCGATAAGTCTAAAGTAGGACGAATGAGTTGCAGTCA TAATAATAAAGGACTTGGCA
Downstream 100 bases:
>100_bases ACTTAATCAAGAGTAAGAGGCTTCTAACTCTGCTCTCCTGCTAACCTGCTCGCTTGTATGTTTAGGCTATCAAGCGAGTA GCAGTGTTCACATCGATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MTTLSTAMLACAITSLTLIQPAFAKLDVEESRLATATQAMPNVVSRYQAFVSNLGEKYSQHDDELKVTQMVVHQGLRLWQ QAVRDVQSGHLDDRSLYWNRLAMRELLKTDEPDFNIAAWQQDILLKAVEKSSRGFSDLHFKDDAQIKILLTGFDPFFLDR NIDQSNPSGLAALALDGYRFKVDGKQAQIETVMIPVRFADFDEGMIESLLTPIYRDNSVDMIFTVSMGRDDFDIERFPGR NRSAAAPDNLNVLTGANKQAPIAPKFNGGSLNGPEFVEFSLPVTVMQTVKGPWKVNDNHTVSTLERGEFEASSLAQLQGA TSVEGSGGGYLSNEISYRAILLQKQFNSSIPVGHIHTPRIAAYDVKIESDIVKQVQEMVVAAAGTL
Sequences:
>Translated_386_residues MTTLSTAMLACAITSLTLIQPAFAKLDVEESRLATATQAMPNVVSRYQAFVSNLGEKYSQHDDELKVTQMVVHQGLRLWQ QAVRDVQSGHLDDRSLYWNRLAMRELLKTDEPDFNIAAWQQDILLKAVEKSSRGFSDLHFKDDAQIKILLTGFDPFFLDR NIDQSNPSGLAALALDGYRFKVDGKQAQIETVMIPVRFADFDEGMIESLLTPIYRDNSVDMIFTVSMGRDDFDIERFPGR NRSAAAPDNLNVLTGANKQAPIAPKFNGGSLNGPEFVEFSLPVTVMQTVKGPWKVNDNHTVSTLERGEFEASSLAQLQGA TSVEGSGGGYLSNEISYRAILLQKQFNSSIPVGHIHTPRIAAYDVKIESDIVKQVQEMVVAAAGTL >Mature_385_residues TTLSTAMLACAITSLTLIQPAFAKLDVEESRLATATQAMPNVVSRYQAFVSNLGEKYSQHDDELKVTQMVVHQGLRLWQQ AVRDVQSGHLDDRSLYWNRLAMRELLKTDEPDFNIAAWQQDILLKAVEKSSRGFSDLHFKDDAQIKILLTGFDPFFLDRN IDQSNPSGLAALALDGYRFKVDGKQAQIETVMIPVRFADFDEGMIESLLTPIYRDNSVDMIFTVSMGRDDFDIERFPGRN RSAAAPDNLNVLTGANKQAPIAPKFNGGSLNGPEFVEFSLPVTVMQTVKGPWKVNDNHTVSTLERGEFEASSLAQLQGAT SVEGSGGGYLSNEISYRAILLQKQFNSSIPVGHIHTPRIAAYDVKIESDIVKQVQEMVVAAAGTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42707; Mature: 42576
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLSTAMLACAITSLTLIQPAFAKLDVEESRLATATQAMPNVVSRYQAFVSNLGEKYSQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HDDELKVTQMVVHQGLRLWQQAVRDVQSGHLDDRSLYWNRLAMRELLKTDEPDFNIAAWQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH QDILLKAVEKSSRGFSDLHFKDDAQIKILLTGFDPFFLDRNIDQSNPSGLAALALDGYRF HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHEECCCCCCCCCCCEEEEEECCEEE KVDGKQAQIETVMIPVRFADFDEGMIESLLTPIYRDNSVDMIFTVSMGRDDFDIERFPGR EECCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHCCCCC NRSAAAPDNLNVLTGANKQAPIAPKFNGGSLNGPEFVEFSLPVTVMQTVKGPWKVNDNHT CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCCCEEECCCCE VSTLERGEFEASSLAQLQGATSVEGSGGGYLSNEISYRAILLQKQFNSSIPVGHIHTPRI EEHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCE AAYDVKIESDIVKQVQEMVVAAAGTL EEEEEEEHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTLSTAMLACAITSLTLIQPAFAKLDVEESRLATATQAMPNVVSRYQAFVSNLGEKYSQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HDDELKVTQMVVHQGLRLWQQAVRDVQSGHLDDRSLYWNRLAMRELLKTDEPDFNIAAWQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH QDILLKAVEKSSRGFSDLHFKDDAQIKILLTGFDPFFLDRNIDQSNPSGLAALALDGYRF HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHEECCCCCCCCCCCEEEEEECCEEE KVDGKQAQIETVMIPVRFADFDEGMIESLLTPIYRDNSVDMIFTVSMGRDDFDIERFPGR EECCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHCCCCC NRSAAAPDNLNVLTGANKQAPIAPKFNGGSLNGPEFVEFSLPVTVMQTVKGPWKVNDNHT CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCCCEEECCCCE VSTLERGEFEASSLAQLQGATSVEGSGGGYLSNEISYRAILLQKQFNSSIPVGHIHTPRI EEHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCE AAYDVKIESDIVKQVQEMVVAAAGTL EEEEEEEHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]