| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is phoB [H]
Identifier: 157960427
GI number: 157960427
Start: 735612
End: 736949
Strand: Reverse
Name: phoB [H]
Synonym: Spea_0598
Alternate gene names: 157960427
Gene position: 736949-735612 (Counterclockwise)
Preceding gene: 157960428
Following gene: 157960426
Centisome position: 14.24
GC content: 48.65
Gene sequence:
>1338_bases ATGAACTTGAGAAAAACATGCACTTGGGCACTTAGTGCCCTTGTTGTGTTACCACTATTTGCATCGGCCAATATCGATAT TCATGAGGCTCCATCGCGTCCTAAAAACATGATTATCATGATCGGTGATGGTATGGGACCGGCTTACACCAGCGCTTATC GTTATTACCAAAATAACCCTGATACCGAAGAGATTGAGCAGACGGTTTTTGATAGGCTGCTAGTCGGCATGGCATCGACC TACCCAGCTAGGCAGAGTGGCTATGTTACCGACTCAGCCGCATCGGCTACCGCTCTGGCAACTGGCGTTAAAAGTTATAA TGGCGCCATCTCTGTCGATGTGGATAAGCGTCCGCTTACAACCATAATGCAGATGGCTAAAGCCCGCGGTATGGCAACCG GTGTAGCCGTAACAGCTCAAGTTAATCATGCCACCCCAGCGGCTTTTTTAGCGCATAACGAAAGCCGTCGCAACTACGAT GCAATCGCCCAAAGCTACTTAAGTTCTGGTGCTGACGTGATCCTAGGTGGTGGCCAAAAGTACTTCCCAGAAGATCTCCT TAAGCAGTTTTCGGCTAAAGACTACCAACATATTAGCCAACTGAGTCAACTCGATAGTTTAACCCAAGGCAAGGCCTTGG GCCTATTTGCCGAGGTGCAACTACCTTGGGTTATCGATCAGCAAGACTCGACTCAATTAAGCTTGCTGACCCAAAAAGCG CTAGAGCTGTTATCGCAAAATCCAAATGGTTTTGTGCTGCTGGTTGAGGGCAGTCTGATCGATTGGGCCGGCCACAATAA CGATATCGCCACCGCCATGGCTGAGATGCACGGTTTTGCCAATGCCATAGAAGTGGTCGAGCAATATGTACGCGCCAATC CTGACACCTTGATGGTGGTGACCGCCGATCATAATACCGGTGGCTTATCGATTGGCGCTAATGGTGAGTATGCTTGGGAT ACCGCGTTACTTAAAGGTATTCAAGCAAGCCCTGCGAGTATCGCAGAACTTGCTATCGCCATAGACGATTGGCAACCATT AGTGAGTCAGAAGCTAGGTTTTGAACTTAAAGCCGAAGAACTACAGTCCCTCGGTAATGCCCGCATGCAAGGCCAAGTCG CGTTAGATACCGCCTTAAAGCAGCTTATCGATAACCGCAGCTTTACCGGCTGGACTACTAGTGGTCACACTGGTGTCGAT GTTCAGGTGTTTGCCGCTGGGCCTGCTGCCGATCTGTTTAAAGGTAATCAAGACAATACCGATATCGCAGACAAGATGAT AAGCCTACTGCCTAGAGCCAAGCAAACTCTTGAAGTGATTTCGAAAGATAATAAGTGA
Upstream 100 bases:
>100_bases TTAAAGAGATTGAAGCAGCCTTCGATGTCGATATCACAGGCATGTTAATGGATGCAATTGAACAGCGTATCAACAAATCA GCATAGCCAAAGGATTCGGC
Downstream 100 bases:
>100_bases CCACTAAACACGCGAAGAGCACGAAGGAAAGCCCCGATTTTTTACTTTTCTTCGAGCTCTCGGTGTAGCTAACAAAAACC GCGCTTCGTGGTTATAGTTT
Product: alkaline phosphatase
Products: NA
Alternate protein names: Alkaline phosphatase III; APase III [H]
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MNLRKTCTWALSALVVLPLFASANIDIHEAPSRPKNMIIMIGDGMGPAYTSAYRYYQNNPDTEEIEQTVFDRLLVGMAST YPARQSGYVTDSAASATALATGVKSYNGAISVDVDKRPLTTIMQMAKARGMATGVAVTAQVNHATPAAFLAHNESRRNYD AIAQSYLSSGADVILGGGQKYFPEDLLKQFSAKDYQHISQLSQLDSLTQGKALGLFAEVQLPWVIDQQDSTQLSLLTQKA LELLSQNPNGFVLLVEGSLIDWAGHNNDIATAMAEMHGFANAIEVVEQYVRANPDTLMVVTADHNTGGLSIGANGEYAWD TALLKGIQASPASIAELAIAIDDWQPLVSQKLGFELKAEELQSLGNARMQGQVALDTALKQLIDNRSFTGWTTSGHTGVD VQVFAAGPAADLFKGNQDNTDIADKMISLLPRAKQTLEVISKDNK
Sequences:
>Translated_445_residues MNLRKTCTWALSALVVLPLFASANIDIHEAPSRPKNMIIMIGDGMGPAYTSAYRYYQNNPDTEEIEQTVFDRLLVGMAST YPARQSGYVTDSAASATALATGVKSYNGAISVDVDKRPLTTIMQMAKARGMATGVAVTAQVNHATPAAFLAHNESRRNYD AIAQSYLSSGADVILGGGQKYFPEDLLKQFSAKDYQHISQLSQLDSLTQGKALGLFAEVQLPWVIDQQDSTQLSLLTQKA LELLSQNPNGFVLLVEGSLIDWAGHNNDIATAMAEMHGFANAIEVVEQYVRANPDTLMVVTADHNTGGLSIGANGEYAWD TALLKGIQASPASIAELAIAIDDWQPLVSQKLGFELKAEELQSLGNARMQGQVALDTALKQLIDNRSFTGWTTSGHTGVD VQVFAAGPAADLFKGNQDNTDIADKMISLLPRAKQTLEVISKDNK >Mature_445_residues MNLRKTCTWALSALVVLPLFASANIDIHEAPSRPKNMIIMIGDGMGPAYTSAYRYYQNNPDTEEIEQTVFDRLLVGMAST YPARQSGYVTDSAASATALATGVKSYNGAISVDVDKRPLTTIMQMAKARGMATGVAVTAQVNHATPAAFLAHNESRRNYD AIAQSYLSSGADVILGGGQKYFPEDLLKQFSAKDYQHISQLSQLDSLTQGKALGLFAEVQLPWVIDQQDSTQLSLLTQKA LELLSQNPNGFVLLVEGSLIDWAGHNNDIATAMAEMHGFANAIEVVEQYVRANPDTLMVVTADHNTGGLSIGANGEYAWD TALLKGIQASPASIAELAIAIDDWQPLVSQKLGFELKAEELQSLGNARMQGQVALDTALKQLIDNRSFTGWTTSGHTGVD VQVFAAGPAADLFKGNQDNTDIADKMISLLPRAKQTLEVISKDNK
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI157266296, Length=480, Percent_Identity=30, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI94721246, Length=460, Percent_Identity=30, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI157266292, Length=454, Percent_Identity=29.7356828193833, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI116734717, Length=460, Percent_Identity=27.8260869565217, Blast_Score=112, Evalue=9e-25, Organism=Homo sapiens, GI294660770, Length=456, Percent_Identity=27.4122807017544, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI294660772, Length=401, Percent_Identity=27.431421446384, Blast_Score=97, Evalue=4e-20, Organism=Escherichia coli, GI48994877, Length=334, Percent_Identity=35.9281437125749, Blast_Score=159, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6320689, Length=482, Percent_Identity=30.0829875518672, Blast_Score=172, Evalue=9e-44, Organism=Drosophila melanogaster, GI21355981, Length=449, Percent_Identity=26.9487750556793, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI21355149, Length=459, Percent_Identity=26.3616557734205, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI21355151, Length=455, Percent_Identity=25.9340659340659, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI85725200, Length=440, Percent_Identity=27.7272727272727, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI85815833, Length=440, Percent_Identity=27.7272727272727, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24651554, Length=465, Percent_Identity=28.1720430107527, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI18859923, Length=413, Percent_Identity=27.1186440677966, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI21358067, Length=332, Percent_Identity=28.6144578313253, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24657842, Length=445, Percent_Identity=25.3932584269663, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI24657827, Length=445, Percent_Identity=25.6179775280899, Blast_Score=82, Evalue=9e-16,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 47943; Mature: 47943
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00123 ALKALINE_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRKTCTWALSALVVLPLFASANIDIHEAPSRPKNMIIMIGDGMGPAYTSAYRYYQNNP CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHCCCC DTEEIEQTVFDRLLVGMASTYPARQSGYVTDSAASATALATGVKSYNGAISVDVDKRPLT CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHH TIMQMAKARGMATGVAVTAQVNHATPAAFLAHNESRRNYDAIAQSYLSSGADVILGGGQK HHHHHHHHCCCCCCEEEEEEECCCCCHHHEECCCCCCHHHHHHHHHHHCCCCEEEECCCC YFPEDLLKQFSAKDYQHISQLSQLDSLTQGKALGLFAEVQLPWVIDQQDSTQLSLLTQKA CCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEECCCCCHHHHHHHHHH LELLSQNPNGFVLLVEGSLIDWAGHNNDIATAMAEMHGFANAIEVVEQYVRANPDTLMVV HHHHHCCCCCEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE TADHNTGGLSIGANGEYAWDTALLKGIQASPASIAELAIAIDDWQPLVSQKLGFELKAEE EECCCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHEEEECCCHHHHHHHCCCEECHHH LQSLGNARMQGQVALDTALKQLIDNRSFTGWTTSGHTGVDVQVFAAGPAADLFKGNQDNT HHHHCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCH DIADKMISLLPRAKQTLEVISKDNK HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNLRKTCTWALSALVVLPLFASANIDIHEAPSRPKNMIIMIGDGMGPAYTSAYRYYQNNP CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHCCCC DTEEIEQTVFDRLLVGMASTYPARQSGYVTDSAASATALATGVKSYNGAISVDVDKRPLT CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHH TIMQMAKARGMATGVAVTAQVNHATPAAFLAHNESRRNYDAIAQSYLSSGADVILGGGQK HHHHHHHHCCCCCCEEEEEEECCCCCHHHEECCCCCCHHHHHHHHHHHCCCCEEEECCCC YFPEDLLKQFSAKDYQHISQLSQLDSLTQGKALGLFAEVQLPWVIDQQDSTQLSLLTQKA CCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEECCCCCHHHHHHHHHH LELLSQNPNGFVLLVEGSLIDWAGHNNDIATAMAEMHGFANAIEVVEQYVRANPDTLMVV HHHHHCCCCCEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE TADHNTGGLSIGANGEYAWDTALLKGIQASPASIAELAIAIDDWQPLVSQKLGFELKAEE EECCCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHEEEECCCHHHHHHHCCCEECHHH LQSLGNARMQGQVALDTALKQLIDNRSFTGWTTSGHTGVDVQVFAAGPAADLFKGNQDNT HHHHCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCH DIADKMISLLPRAKQTLEVISKDNK HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1898729; 9202461; 9384377; 2113910; 2105301 [H]