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The map label for this gene is rsmC

Identifier: 157960426

GI number: 157960426

Start: 734320

End: 735345

Strand: Reverse

Name: rsmC

Synonym: Spea_0597

Alternate gene names: 157960426

Gene position: 735345-734320 (Counterclockwise)

Preceding gene: 157960427

Following gene: 157960425

Centisome position: 14.21

GC content: 44.74

Gene sequence:

>1026_bases
ATGCTAACCAACGCTTCGCAAGTCCTCCTCAGAAACAGTGATTTAGTCAAAGACCAATCGGTATTAGTACTCAATTATGA
AAGTGATCACCTGCCAAAAGAGTTGTTAGCAACCGCCAGCAGCGTGTGTGGATTAGCATTAGACTATCATCACCATCTGA
TGATGCAGCCTTATGCCGCGGCAAACCTGACACTGCATTTTGGTCATCAGCTACCAACCGATGAGTGTTTTGACACTGTT
ATCGTCTACTTCCCTAAGGCTAAAGCGCTAGCACCTTATCTGTTTAATCTCGCTGCTAAGCATCTAAAACCTCAAGGGCA
ACTGATTGTTGCAGGTGAAAACAAAGGTGGCATTAAGTCTCTGCCTAAGCAGTTACCGAGTTATTTCGATAAAGCTTTTA
AAGTCGATAATGCCCGTCACTGCATCCTATTTACCAGTGAGCTAAATTCACCGGCTCCAGAGTTGAAACTCAAAGACTGG
CTCAGTCGCTACCAACTTGATACTCCTCAAGGACAAGTGACTATCTGTAATTTAGTTGGCGTGTTTAGTGAGAAGAAACT
CGATGAAGGTACGCAATTACTACTGGCTAATTTACCTAAGATGAGCGGCAATGTGCTCGATTTTGGTTGTGGTGCAGGGG
TTATCACCGCCGCTTTACTCAAGGCTCAGCCAGATCTTAAGCTTGAGTGTGTCGATATCAATGCCATGGCACTAGCCTCT
TGCGAGCTCACCTTAGAAGCCAATGGATTTACGGCTAAGGTCTTTGCATCCGATGGCCTAGCGCAAACATCTCAGCGCTA
TGACGGCATTATTTCAAATCCACCGTTTCATGATGGTTTAGCAAGCACCACCAACATTGCGACTAATTTCGTAAAAGACA
GTGCCAACAACTTAAAGGCTGGGGGGTTATTCCACATTGTGGCTAATCGTCACCTGCCGTACTCAGACACCATTGCCGAA
CACTTTGGCAGTGTGAACGTGCTAGCTGAAAACAATAAATACAAGATTTACTCTAACGTAAAATAG

Upstream 100 bases:

>100_bases
CAACAATCCTACTCATCACCATAGATAACGAGCATCAAATTCGCATTCCAAAGCGGTTGCGGTATAATCGCAGCCAATTA
AAAGTCGACCTTGAATACAC

Downstream 100 bases:

>100_bases
CTAATGTAACTAACGTAGCTAACGTCCCAGCAAAATATGCTTTGAGGCATGACATGGCTCATGCCTTAGAGCTCTTACCT
CCCCTTTTATACCCAAGCTA

Product: rRNA (guanine-N(2)-)-methyltransferase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MLTNASQVLLRNSDLVKDQSVLVLNYESDHLPKELLATASSVCGLALDYHHHLMMQPYAAANLTLHFGHQLPTDECFDTV
IVYFPKAKALAPYLFNLAAKHLKPQGQLIVAGENKGGIKSLPKQLPSYFDKAFKVDNARHCILFTSELNSPAPELKLKDW
LSRYQLDTPQGQVTICNLVGVFSEKKLDEGTQLLLANLPKMSGNVLDFGCGAGVITAALLKAQPDLKLECVDINAMALAS
CELTLEANGFTAKVFASDGLAQTSQRYDGIISNPPFHDGLASTTNIATNFVKDSANNLKAGGLFHIVANRHLPYSDTIAE
HFGSVNVLAENNKYKIYSNVK

Sequences:

>Translated_341_residues
MLTNASQVLLRNSDLVKDQSVLVLNYESDHLPKELLATASSVCGLALDYHHHLMMQPYAAANLTLHFGHQLPTDECFDTV
IVYFPKAKALAPYLFNLAAKHLKPQGQLIVAGENKGGIKSLPKQLPSYFDKAFKVDNARHCILFTSELNSPAPELKLKDW
LSRYQLDTPQGQVTICNLVGVFSEKKLDEGTQLLLANLPKMSGNVLDFGCGAGVITAALLKAQPDLKLECVDINAMALAS
CELTLEANGFTAKVFASDGLAQTSQRYDGIISNPPFHDGLASTTNIATNFVKDSANNLKAGGLFHIVANRHLPYSDTIAE
HFGSVNVLAENNKYKIYSNVK
>Mature_341_residues
MLTNASQVLLRNSDLVKDQSVLVLNYESDHLPKELLATASSVCGLALDYHHHLMMQPYAAANLTLHFGHQLPTDECFDTV
IVYFPKAKALAPYLFNLAAKHLKPQGQLIVAGENKGGIKSLPKQLPSYFDKAFKVDNARHCILFTSELNSPAPELKLKDW
LSRYQLDTPQGQVTICNLVGVFSEKKLDEGTQLLLANLPKMSGNVLDFGCGAGVITAALLKAQPDLKLECVDINAMALAS
CELTLEANGFTAKVFASDGLAQTSQRYDGIISNPPFHDGLASTTNIATNFVKDSANNLKAGGLFHIVANRHLPYSDTIAE
HFGSVNVLAENNKYKIYSNVK

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family

Homologues:

Organism=Escherichia coli, GI1790830, Length=342, Percent_Identity=35.9649122807018, Blast_Score=195, Evalue=3e-51,
Organism=Escherichia coli, GI87082206, Length=174, Percent_Identity=36.2068965517241, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMC_SHEPA (A8H038)

Other databases:

- EMBL:   CP000851
- RefSeq:   YP_001500460.1
- ProteinModelPortal:   A8H038
- STRING:   A8H038
- GeneID:   5660997
- GenomeReviews:   CP000851_GR
- KEGG:   spl:Spea_0597
- NMPDR:   fig|398579.3.peg.525
- eggNOG:   COG2813
- HOGENOM:   HBG296757
- OMA:   RHCQLWQ
- ProtClustDB:   CLSK905955
- BioCyc:   SPEA398579:SPEA_0597-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01862
- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848

Pfam domain/function: PF05175 MTS; PF08468 MTS_N

EC number: =2.1.1.172

Molecular weight: Translated: 37173; Mature: 37173

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTNASQVLLRNSDLVKDQSVLVLNYESDHLPKELLATASSVCGLALDYHHHLMMQPYAA
CCCCCHHHEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCC
ANLTLHFGHQLPTDECFDTVIVYFPKAKALAPYLFNLAAKHLKPQGQLIVAGENKGGIKS
CEEEEEECCCCCHHHHHCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHH
LPKQLPSYFDKAFKVDNARHCILFTSELNSPAPELKLKDWLSRYQLDTPQGQVTICNLVG
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEHH
VFSEKKLDEGTQLLLANLPKMSGNVLDFGCGAGVITAALLKAQPDLKLECVDINAMALAS
HHHHHCCCCCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEEEECCEEEEEE
CELTLEANGFTAKVFASDGLAQTSQRYDGIISNPPFHDGLASTTNIATNFVKDSANNLKA
EEEEEECCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
GGLFHIVANRHLPYSDTIAEHFGSVNVLAENNKYKIYSNVK
CCEEEEEECCCCCCHHHHHHHCCCEEEEEECCCEEEEECCC
>Mature Secondary Structure
MLTNASQVLLRNSDLVKDQSVLVLNYESDHLPKELLATASSVCGLALDYHHHLMMQPYAA
CCCCCHHHEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCC
ANLTLHFGHQLPTDECFDTVIVYFPKAKALAPYLFNLAAKHLKPQGQLIVAGENKGGIKS
CEEEEEECCCCCHHHHHCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHH
LPKQLPSYFDKAFKVDNARHCILFTSELNSPAPELKLKDWLSRYQLDTPQGQVTICNLVG
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEHH
VFSEKKLDEGTQLLLANLPKMSGNVLDFGCGAGVITAALLKAQPDLKLECVDINAMALAS
HHHHHCCCCCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEEEECCEEEEEE
CELTLEANGFTAKVFASDGLAQTSQRYDGIISNPPFHDGLASTTNIATNFVKDSANNLKA
EEEEEECCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
GGLFHIVANRHLPYSDTIAEHFGSVNVLAENNKYKIYSNVK
CCEEEEEECCCCCCHHHHHHHCCCEEEEEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA