Definition | Rickettsia akari str. Hartford, complete genome. |
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Accession | NC_009881 |
Length | 1,231,060 |
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The map label for this gene is 157825726
Identifier: 157825726
GI number: 157825726
Start: 594276
End: 594626
Strand: Direct
Name: 157825726
Synonym: A1C_03260
Alternate gene names: NA
Gene position: 594276-594626 (Clockwise)
Preceding gene: 157825725
Following gene: 157825727
Centisome position: 48.27
GC content: 32.19
Gene sequence:
>351_bases GTGGTTATTACTTATTCTGTAATTGATAATATTAATTCCACTCTTGAAGCCTTACAAGCACGAGGTGCAAGTGTTTATTA CATAACTGATAAGGATGGAACGCAATATCAATATCATAATGATTTAATAGATCAAGCTTTTTATGCTGGCAAGAGTAGTT GGCAAGGAGAAGTAGGTGTTAATAAGTTTGGTATTGGGAATATGCTTATTAATGATGCAAAAAGTGATTTTGCTGAAGAG CAAATAGAGCAGTTATGTAAATTCCTTAAGGATATAAAAGTAAGATATCCGGATTTAGATTTAAAACATGATTTAGTAGG TTTTGGTGAAGTAACTAGCTGGTTTTGGTAG
Upstream 100 bases:
>100_bases AATATTATGCCAAATGAGAATAATAACGGTATCATTAACAACCAATAGCCCAAACGGTAAATATATGTCTCCAAGACCGG AATGAGTAAAACCTAACTGT
Downstream 100 bases:
>100_bases ATATTCTGATACTACGCAAGATCAAAATAGTAAAGTATTATTAGGTCTTGATAGTACTGGAGAACAAGTTGATACTTTAC AAACAAAGTTAAAAGCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MVITYSVIDNINSTLEALQARGASVYYITDKDGTQYQYHNDLIDQAFYAGKSSWQGEVGVNKFGIGNMLINDAKSDFAEE QIEQLCKFLKDIKVRYPDLDLKHDLVGFGEVTSWFW
Sequences:
>Translated_116_residues MVITYSVIDNINSTLEALQARGASVYYITDKDGTQYQYHNDLIDQAFYAGKSSWQGEVGVNKFGIGNMLINDAKSDFAEE QIEQLCKFLKDIKVRYPDLDLKHDLVGFGEVTSWFW >Mature_116_residues MVITYSVIDNINSTLEALQARGASVYYITDKDGTQYQYHNDLIDQAFYAGKSSWQGEVGVNKFGIGNMLINDAKSDFAEE QIEQLCKFLKDIKVRYPDLDLKHDLVGFGEVTSWFW
Specific function: Unknown
COG id: COG3023
COG function: function code V; Negative regulator of beta-lactamase expression
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002502 - InterPro: IPR002477 [H]
Pfam domain/function: PF01510 Amidase_2; PF01471 PG_binding_1 [H]
EC number: =3.5.1.28 [H]
Molecular weight: Translated: 13255; Mature: 13255
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVITYSVIDNINSTLEALQARGASVYYITDKDGTQYQYHNDLIDQAFYAGKSSWQGEVGV CEEEEHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC NKFGIGNMLINDAKSDFAEEQIEQLCKFLKDIKVRYPDLDLKHDLVGFGEVTSWFW CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCC >Mature Secondary Structure MVITYSVIDNINSTLEALQARGASVYYITDKDGTQYQYHNDLIDQAFYAGKSSWQGEVGV CEEEEHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC NKFGIGNMLINDAKSDFAEEQIEQLCKFLKDIKVRYPDLDLKHDLVGFGEVTSWFW CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]