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The map label for this gene is recR [H]

Identifier: 157825725

GI number: 157825725

Start: 593442

End: 594065

Strand: Direct

Name: recR [H]

Synonym: A1C_03255

Alternate gene names: 157825725

Gene position: 593442-594065 (Clockwise)

Preceding gene: 157825724

Following gene: 157825726

Centisome position: 48.21

GC content: 34.46

Gene sequence:

>624_bases
ATGATATATACTCCGACTATGAATAAAACAAATGATCATGAAATAGACCAGCTGATTTATCTTTTTTCAAAATTGCCTGG
GCTTGGTAGTAGGTCAGCAAGACGTATAGTGCTTTATCTACTACAAGACAAAGATGTTAGGTTAAAAAGCCTGATTAATA
ACCTTGTAGAGATAGATAAGAAAATAGTAAAATGCAAGATTTGTGGTAATATGGATACGGAAAGTATTTGCTCTATTTGC
TCTTCTAAATATAGAGATAAATCGGTTATTGCTGTTGTTGAAACCGTAGCTGAATTATGGGCAATGGAGCGTAGCGGTAA
TTTTAAAGGTTTATATCATGTACTAGGCCATAATTTATCGGCGGCTAGTAGGCAAAATCCTAGCATACTAAGGTTACCTG
AACTACTTAAAAGATGTTTTGCAGAAAATATTAAAGAAGTTATTATTGCTACTAATTCTACTTTAGAAGGTCAAACTACT
GCCTATTTTATTACTGAATATTTAAAAGAGCATCCTGCTAAAATTTCTCGCCTTGCTAGCGGTATACCTATCGGAGGTGA
ACTTGATTATCTAGACGAAGGTACTTTATCTGCCGCTATTAACCTACGCCAACCTTTTGAGTAA

Upstream 100 bases:

>100_bases
ATCCTCACGTACTAGTTACGTACGCTGCGGTGAAAAGCTTCAAAACGCCTTGCTCTTTTCCAAATTGATCTTCGTATTGT
ATACCAACTCTTCATTTATA

Downstream 100 bases:

>100_bases
AAAATTATTGCTTTTACCTATCTAACTACTTAATAAAAATTAATTAAATTATTTTGTTAACAGTGCCATAGTGCAATAAT
TGAATTTTTTATTAAAAAAA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MIYTPTMNKTNDHEIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLVEIDKKIVKCKICGNMDTESICSIC
SSKYRDKSVIAVVETVAELWAMERSGNFKGLYHVLGHNLSAASRQNPSILRLPELLKRCFAENIKEVIIATNSTLEGQTT
AYFITEYLKEHPAKISRLASGIPIGGELDYLDEGTLSAAINLRQPFE

Sequences:

>Translated_207_residues
MIYTPTMNKTNDHEIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLVEIDKKIVKCKICGNMDTESICSIC
SSKYRDKSVIAVVETVAELWAMERSGNFKGLYHVLGHNLSAASRQNPSILRLPELLKRCFAENIKEVIIATNSTLEGQTT
AYFITEYLKEHPAKISRLASGIPIGGELDYLDEGTLSAAINLRQPFE
>Mature_207_residues
MIYTPTMNKTNDHEIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLVEIDKKIVKCKICGNMDTESICSIC
SSKYRDKSVIAVVETVAELWAMERSGNFKGLYHVLGHNLSAASRQNPSILRLPELLKRCFAENIKEVIIATNSTLEGQTT
AYFITEYLKEHPAKISRLASGIPIGGELDYLDEGTLSAAINLRQPFE

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=191, Percent_Identity=36.6492146596859, Blast_Score=124, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 23251; Mature: 23251

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYTPTMNKTNDHEIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLVEIDK
CEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHH
KIVKCKICGNMDTESICSICSSKYRDKSVIAVVETVAELWAMERSGNFKGLYHVLGHNLS
HHHEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCC
AASRQNPSILRLPELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLAS
CCCCCCCCEEHHHHHHHHHHHHHHHHEEHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GIPIGGELDYLDEGTLSAAINLRQPFE
CCCCCCCCCCCCCCCHHHEECCCCCCC
>Mature Secondary Structure
MIYTPTMNKTNDHEIDQLIYLFSKLPGLGSRSARRIVLYLLQDKDVRLKSLINNLVEIDK
CEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHH
KIVKCKICGNMDTESICSICSSKYRDKSVIAVVETVAELWAMERSGNFKGLYHVLGHNLS
HHHEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCC
AASRQNPSILRLPELLKRCFAENIKEVIIATNSTLEGQTTAYFITEYLKEHPAKISRLAS
CCCCCCCCEEHHHHHHHHHHHHHHHHEEHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GIPIGGELDYLDEGTLSAAINLRQPFE
CCCCCCCCCCCCCCCHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA