Definition | Rickettsia akari str. Hartford, complete genome. |
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Accession | NC_009881 |
Length | 1,231,060 |
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The map label for this gene is cusC [C]
Identifier: 157825697
GI number: 157825697
Start: 563672
End: 564052
Strand: Reverse
Name: cusC [C]
Synonym: A1C_03115
Alternate gene names: 157825697
Gene position: 564052-563672 (Counterclockwise)
Preceding gene: 157825698
Following gene: 157825696
Centisome position: 45.82
GC content: 33.86
Gene sequence:
>381_bases GTGATAAACCTAGATTATTTCCCTGCTCTACCGGTATTACCTAAAATATTACCGTCAGAACTTTTAGGGCAAAGACTGGA TATTAAAGCAGCAGAGCAGAATTTACTAGCAGCAGATGCAAACTTAAAAGCAATAAAAGCTACTTATTTTATGCAAATTT CTTTAACAGGTTTATTAGGACTCGGTAGCAATAAACTTAATACTCTATTTACTCACTTATCTGAGACTGGGTGTAAGTTA TGGATGCTTTATCGTTTGAACAAACATCAAGTAATAATTTTTGGGCCACAAAATGAAGCATCTTTAACATCTATATTTAA GCGTGCTGATCAGCGTTATAAACGAAGTAATATAAGATTACTGAACAGTGCTTACCGCTAA
Upstream 100 bases:
>100_bases CATTGCAACCTTTAAAACAACAAATGCACGAGCAGGAAACAGCTTTAAAAATTTTAAGTAGGTAGAACTCCTGACAATAT AGTAAACGGCTTAATTTATC
Downstream 100 bases:
>100_bases ACAAAACGAAATTGACTAGGTGGCTATAAAGCTTTCACAGCTAAGTTCTATGGTTAATATTTTCCATGCTCGTGTAGGAG AGTGGTAGTACGATCCACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MINLDYFPALPVLPKILPSELLGQRLDIKAAEQNLLAADANLKAIKATYFMQISLTGLLGLGSNKLNTLFTHLSETGCKL WMLYRLNKHQVIIFGPQNEASLTSIFKRADQRYKRSNIRLLNSAYR
Sequences:
>Translated_126_residues MINLDYFPALPVLPKILPSELLGQRLDIKAAEQNLLAADANLKAIKATYFMQISLTGLLGLGSNKLNTLFTHLSETGCKL WMLYRLNKHQVIIFGPQNEASLTSIFKRADQRYKRSNIRLLNSAYR >Mature_126_residues MINLDYFPALPVLPKILPSELLGQRLDIKAAEQNLLAADANLKAIKATYFMQISLTGLLGLGSNKLNTLFTHLSETGCKL WMLYRLNKHQVIIFGPQNEASLTSIFKRADQRYKRSNIRLLNSAYR
Specific function: In Pathogenic Strains It Allows The Bacteria To Invade Brain Microvascular Endothelial Cells (Bmec) Thus Allowing It To Cross The Blood-Brain Barrier And Cause Neonatal Meningitis. [C]
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14279; Mature: 14279
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLDYFPALPVLPKILPSELLGQRLDIKAAEQNLLAADANLKAIKATYFMQISLTGLLG CCCCCCCCCCHHHHHCCCHHHCCCCCCCHHHCCCEEECCCCCEEEEHEEEEEEEEEEEEE LGSNKLNTLFTHLSETGCKLWMLYRLNKHQVIIFGPQNEASLTSIFKRADQRYKRSNIRL CCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH LNSAYR HHCCCC >Mature Secondary Structure MINLDYFPALPVLPKILPSELLGQRLDIKAAEQNLLAADANLKAIKATYFMQISLTGLLG CCCCCCCCCCHHHHHCCCHHHCCCCCCCHHHCCCEEECCCCCEEEEHEEEEEEEEEEEEE LGSNKLNTLFTHLSETGCKLWMLYRLNKHQVIIFGPQNEASLTSIFKRADQRYKRSNIRL CCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH LNSAYR HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA