Definition | Rickettsia akari str. Hartford, complete genome. |
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Accession | NC_009881 |
Length | 1,231,060 |
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The map label for this gene is 157825696
Identifier: 157825696
GI number: 157825696
Start: 563292
End: 563489
Strand: Reverse
Name: 157825696
Synonym: A1C_03110
Alternate gene names: NA
Gene position: 563489-563292 (Counterclockwise)
Preceding gene: 157825697
Following gene: 157825695
Centisome position: 45.77
GC content: 32.83
Gene sequence:
>198_bases TTGATAACATTATTAGTGCTAATAGTAATATTAGTGGTTTGGGTAATAAAAAATCATCATAAAAGTAGTAAACAAATCAC TATAGCAACTCCGGTTGAAATAACAAAAGTTATCAGAAAAGATGTACCTTATGTGATAGAGCTTGCAGGAGCGGCTGAAA CTTACCAAAGTGCCGATATTAGACCTCAAGTTACATGA
Upstream 100 bases:
>100_bases TGGTAGTACGATCCACGTCATTGCGAGCGACTGCAAGCCTTGTTGCATAAATGAGCAAAAAGAACACAAACACCTTAAAA CAATAATGCGGAATTTGATA
Downstream 100 bases:
>100_bases CAAATATTAAGTGTAAATTTTGATGATGGACAAGAAGTAAAAGAGGGTGATTTATTATATAAAATCGATTCTCGTCCGTT GCAAAATCAATTACATCAAG
Product: RND family transporter membrane-fusion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MITLLVLIVILVVWVIKNHHKSSKQITIATPVEITKVIRKDVPYVIELAGAAETYQSADIRPQVT
Sequences:
>Translated_65_residues MITLLVLIVILVVWVIKNHHKSSKQITIATPVEITKVIRKDVPYVIELAGAAETYQSADIRPQVT >Mature_65_residues MITLLVLIVILVVWVIKNHHKSSKQITIATPVEITKVIRKDVPYVIELAGAAETYQSADIRPQVT
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7266; Mature: 7266
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLLVLIVILVVWVIKNHHKSSKQITIATPVEITKVIRKDVPYVIELAGAAETYQSADI CHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCEEEEECCCHHHHCCCCC RPQVT CCCCC >Mature Secondary Structure MITLLVLIVILVVWVIKNHHKSSKQITIATPVEITKVIRKDVPYVIELAGAAETYQSADI CHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCEEEEECCCHHHHCCCCC RPQVT CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA