Definition | Rickettsia akari str. Hartford, complete genome. |
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Accession | NC_009881 |
Length | 1,231,060 |
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The map label for this gene is yegM [C]
Identifier: 157825695
GI number: 157825695
Start: 562920
End: 563213
Strand: Reverse
Name: yegM [C]
Synonym: A1C_03105
Alternate gene names: 157825695
Gene position: 563213-562920 (Counterclockwise)
Preceding gene: 157825696
Following gene: 157825694
Centisome position: 45.75
GC content: 33.33
Gene sequence:
>294_bases TTGCAAAATCAATTACATCAAGCACAAGCAAATTTACTAAGTGATACTTATAACCTAAAAAATGCTATAAAAGAAGAAGC AAGATATCGTGCTTTATCTGAAGAAAAAGCCGTTTCGGAAGAGCAATATTTACAGATGCTAACTAATATGGATATGCTTG GGGCTGCTGTTGAACGTGATCAGGCAATTATTGCAGATACGAATTTACAAATCAAGTATTCAAAAATAGTAGCTCCTTTT GACGGTAAACTTAGTGAGAGTAATGTTGATATAGGTGATTTAGTGTCACCATAA
Upstream 100 bases:
>100_bases TATTAGACCTCAAGTTACATGACAAATATTAAGTGTAAATTTTGATGATGGACAAGAAGTAAAAGAGGGTGATTTATTAT ATAAAATCGATTCTCGTCCG
Downstream 100 bases:
>100_bases AGTCTTGTCACTATAAATATCATCTCACCTATTTATGTCAGTTTCTTCGTACCTTAAGAATATCTAGACCATATTAATAA ATCTCAAAAATCTTATGACT
Product: RND family transporter membrane-fusion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MQNQLHQAQANLLSDTYNLKNAIKEEARYRALSEEKAVSEEQYLQMLTNMDMLGAAVERDQAIIADTNLQIKYSKIVAPF DGKLSESNVDIGDLVSP
Sequences:
>Translated_97_residues MQNQLHQAQANLLSDTYNLKNAIKEEARYRALSEEKAVSEEQYLQMLTNMDMLGAAVERDQAIIADTNLQIKYSKIVAPF DGKLSESNVDIGDLVSP >Mature_97_residues MQNQLHQAQANLLSDTYNLKNAIKEEARYRALSEEKAVSEEQYLQMLTNMDMLGAAVERDQAIIADTNLQIKYSKIVAPF DGKLSESNVDIGDLVSP
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10859; Mature: 10859
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNQLHQAQANLLSDTYNLKNAIKEEARYRALSEEKAVSEEQYLQMLTNMDMLGAAVERD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHCC QAIIADTNLQIKYSKIVAPFDGKLSESNVDIGDLVSP CEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQNQLHQAQANLLSDTYNLKNAIKEEARYRALSEEKAVSEEQYLQMLTNMDMLGAAVERD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHCC QAIIADTNLQIKYSKIVAPFDGKLSESNVDIGDLVSP CEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA