Definition | Rickettsia akari str. Hartford, complete genome. |
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Accession | NC_009881 |
Length | 1,231,060 |
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The map label for this gene is fabI [H]
Identifier: 157825627
GI number: 157825627
Start: 490076
End: 490858
Strand: Reverse
Name: fabI [H]
Synonym: A1C_02720
Alternate gene names: 157825627
Gene position: 490858-490076 (Counterclockwise)
Preceding gene: 157825632
Following gene: 157825620
Centisome position: 39.87
GC content: 35.12
Gene sequence:
>783_bases ATGACTACAGGATTACTACAAGGAAAAAAAGGCTTAATTACAGGCATTGCAAATAATATGTCAATATCGTGGGCGATTGC ACAGCTTACTAAAAAACACGGAGCAGAGCTGTGGTTTACGTACCAATCGGAAGTACTAGAAAAACGAGTTAAACCACTCG CTGAGGAAATAGGTTGTAATTTTGTTAGCGAACTTGATGTTACGAATCCAAAATCAATTAGTAATTTATTTGATGATATA AAAGCAAAATGGTATAGCTTCGATTTCTTACTGCACGGTATGGCTTTTGCCGATAAAAATGAATTAAAAGGACGTTATGT TGATACTAGCTTAGAAAATTTTCATAATTCTTTACATATATCATGTTACTCTCTTTTAGAACTCTCACGGTCTGCAGAAG CCTTAATGCATGACGGCGGAAGCATTGTGACGTTAACCTACTACGGTGCTGAAAAAGTTATACCTAATTATAATGTAATG GGGATTTCTAAAGCTGCACTTGAGGCTAGTGTAAAATATCTAGCAAACGACTTGGGAAAAAATAATATTAGAGTAAATGC TATTTCGGCAGGACCTATCAAAACTCTAGCATCTAGTGCAATAGGTGATTTTAGTACTATGCTTAAATCTCACGCTACAA ACGCACCGTTAAAACGTAATACTACCCAAGAAGATGTAGGAGGAGCAGCAGTATATTTATTTAGTAATTTATCTCAAGGT GTTACCGGTGAAATTCATTATGTAGATTGCGGTTACAATATTATGGGAAGTCATAAATTATAA
Upstream 100 bases:
>100_bases GATTTTAGATTTATACATTTTTATCGATTGTATAATATTTGTTTACAAAATAATACATCATGCTATCATTTCAGCAAGTT TTAATATAATGAGTAAATAA
Downstream 100 bases:
>100_bases ATTATCATTGCATATATCATTAAACGCGTTCGATGTCATACCAGCGTGGCGTTGTTGCATGGACCGGTAAAGGTTCTTTA TGTCATTCTTAGCTAAAAGC
Product: enoyl-(acyl carrier protein) reductase
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase [H]
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MTTGLLQGKKGLITGIANNMSISWAIAQLTKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDI KAKWYSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVM GISKAALEASVKYLANDLGKNNIRVNAISAGPIKTLASSAIGDFSTMLKSHATNAPLKRNTTQEDVGGAAVYLFSNLSQG VTGEIHYVDCGYNIMGSHKL
Sequences:
>Translated_260_residues MTTGLLQGKKGLITGIANNMSISWAIAQLTKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDI KAKWYSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVM GISKAALEASVKYLANDLGKNNIRVNAISAGPIKTLASSAIGDFSTMLKSHATNAPLKRNTTQEDVGGAAVYLFSNLSQG VTGEIHYVDCGYNIMGSHKL >Mature_259_residues TTGLLQGKKGLITGIANNMSISWAIAQLTKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIK AKWYSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMG ISKAALEASVKYLANDLGKNNIRVNAISAGPIKTLASSAIGDFSTMLKSHATNAPLKRNTTQEDVGGAAVYLFSNLSQGV TGEIHYVDCGYNIMGSHKL
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787545, Length=258, Percent_Identity=43.4108527131783, Blast_Score=236, Evalue=1e-63, Organism=Escherichia coli, GI1789378, Length=257, Percent_Identity=26.8482490272374, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI87082100, Length=265, Percent_Identity=27.5471698113208, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI2367365, Length=254, Percent_Identity=27.1653543307087, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787905, Length=255, Percent_Identity=27.4509803921569, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 28411; Mature: 28279
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGLLQGKKGLITGIANNMSISWAIAQLTKKHGAELWFTYQSEVLEKRVKPLAEEIGCN CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCC FVSELDVTNPKSISNLFDDIKAKWYSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHI CCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEECCHHHHHCCHHHH SCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGISKAALEASVKYLANDLGK HHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCCCCCCEEECHHHHHHHHHHHHHHHCCC NNIRVNAISAGPIKTLASSAIGDFSTMLKSHATNAPLKRNTTQEDVGGAAVYLFSNLSQG CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEEHHCCCC VTGEIHYVDCGYNIMGSHKL CCCEEEEEECCCEECCCCCC >Mature Secondary Structure TTGLLQGKKGLITGIANNMSISWAIAQLTKKHGAELWFTYQSEVLEKRVKPLAEEIGCN CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCC FVSELDVTNPKSISNLFDDIKAKWYSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHI CCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEECCHHHHHCCHHHH SCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGISKAALEASVKYLANDLGK HHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCCCCCCEEECHHHHHHHHHHHHHHHCCC NNIRVNAISAGPIKTLASSAIGDFSTMLKSHATNAPLKRNTTQEDVGGAAVYLFSNLSQG CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEEHHCCCC VTGEIHYVDCGYNIMGSHKL CCCEEEEEECCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]