Definition | Rickettsia akari str. Hartford, complete genome. |
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Accession | NC_009881 |
Length | 1,231,060 |
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The map label for this gene is 157825620
Identifier: 157825620
GI number: 157825620
Start: 484236
End: 484718
Strand: Reverse
Name: 157825620
Synonym: A1C_02685
Alternate gene names: NA
Gene position: 484718-484236 (Counterclockwise)
Preceding gene: 157825627
Following gene: 157825619
Centisome position: 39.37
GC content: 28.16
Gene sequence:
>483_bases ATGAAGTTACTACGAATTGTTTTTATCGCGATCATATGTGCTTACTCTTCTGTATTTGCAGAAAATTTAGAGTCGGTTAC TACAACTGAAGATATTGAAAATGATGTATTTATCCCTCTTGATGAAAATCATCCTATTCTAAATCCAAACGATAATATTA ATGATAGTTCTGAATTTAAGAATTATACAAATGGTAAAATTATTGCATTAAATAAAATTACCGCTACTTCTGAAGAAATT AATTTTAAAGTCGGGGAAGAGAAATATTTCGGTAATATAAAAATCAAATTGCATAAATGTATAAAAAACCTTGATCCGTA TAATGAAGATAATTATTTGTTGATGACCATAACGGAATATACAATAGACGAAGATCCTAATTTACTCTTTCAAGGATGGA TGACTTCTTCAAGCATTTCACTTTCAACATTTGAACACCCAATCTACGAAATTTTTGTGAAAGATTGTTTTGAATTGAAA TGA
Upstream 100 bases:
>100_bases GCCTGGATACAGTGGTCAAGCCACGGTATGACATATATCACAAATTATCATTGCGATTAATCCCCTATAGTATATAATTT TAAAAATAATATGTTTATTT
Downstream 100 bases:
>100_bases TAAATTATTTAACTGCAACTTTAATATTCCTAATTCCAAGCCTTGGAATGGTAGCAGGCTTATCGGTTGCAGCTACTGTT ACAATTTTTTTGTTAATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MKLLRIVFIAIICAYSSVFAENLESVTTTEDIENDVFIPLDENHPILNPNDNINDSSEFKNYTNGKIIALNKITATSEEI NFKVGEEKYFGNIKIKLHKCIKNLDPYNEDNYLLMTITEYTIDEDPNLLFQGWMTSSSISLSTFEHPIYEIFVKDCFELK
Sequences:
>Translated_160_residues MKLLRIVFIAIICAYSSVFAENLESVTTTEDIENDVFIPLDENHPILNPNDNINDSSEFKNYTNGKIIALNKITATSEEI NFKVGEEKYFGNIKIKLHKCIKNLDPYNEDNYLLMTITEYTIDEDPNLLFQGWMTSSSISLSTFEHPIYEIFVKDCFELK >Mature_160_residues MKLLRIVFIAIICAYSSVFAENLESVTTTEDIENDVFIPLDENHPILNPNDNINDSSEFKNYTNGKIIALNKITATSEEI NFKVGEEKYFGNIKIKLHKCIKNLDPYNEDNYLLMTITEYTIDEDPNLLFQGWMTSSSISLSTFEHPIYEIFVKDCFELK
Specific function: Unknown
COG id: COG4765
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019225 [H]
Pfam domain/function: PF09923 DUF2155 [H]
EC number: NA
Molecular weight: Translated: 18476; Mature: 18476
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLRIVFIAIICAYSSVFAENLESVTTTEDIENDVFIPLDENHPILNPNDNINDSSEFK CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEECCCCCCCCCHHHC NYTNGKIIALNKITATSEEINFKVGEEKYFGNIKIKLHKCIKNLDPYNEDNYLLMTITEY CCCCCEEEEEEEEECCCCCEEEEECCEEEECEEEEEHHHHHHHCCCCCCCCEEEEEEEEE TIDEDPNLLFQGWMTSSSISLSTFEHPIYEIFVKDCFELK EECCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLLRIVFIAIICAYSSVFAENLESVTTTEDIENDVFIPLDENHPILNPNDNINDSSEFK CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEECCCCCCCCCHHHC NYTNGKIIALNKITATSEEINFKVGEEKYFGNIKIKLHKCIKNLDPYNEDNYLLMTITEY CCCCCEEEEEEEEECCCCCEEEEECCEEEECEEEEEHHHHHHHCCCCCCCCEEEEEEEEE TIDEDPNLLFQGWMTSSSISLSTFEHPIYEIFVKDCFELK EECCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]