Definition | Rickettsia akari str. Hartford, complete genome. |
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Accession | NC_009881 |
Length | 1,231,060 |
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The map label for this gene is 157825591
Identifier: 157825591
GI number: 157825591
Start: 461926
End: 462687
Strand: Reverse
Name: 157825591
Synonym: A1C_02530
Alternate gene names: NA
Gene position: 462687-461926 (Counterclockwise)
Preceding gene: 157825593
Following gene: 157825590
Centisome position: 37.58
GC content: 28.87
Gene sequence:
>762_bases ATGCACAAGCTTTATAATAAAACACAAGACAAATTTATTGTCTATGATAATTATAAAATAATTAATACAAATATTCCATC TGTAATTTTTTTACACGGCTTGATGTCTAGTATGCAATCAACTAAGGCTATCTATTTAATAGATTATTGTAAAAAAAACA ATTATAATTTTATTGTTTTTGATAATTTCGGTCATGGGAATGCATCGGAACAATTTGAGGATCAAACAATTAGTGATTGG TTAGAAGGAGTATCACTAATTTTAGACAAATTAATTGATAAGGAGGCGATATTAGTAGGTTCGAGCATGGGAGGATGGCT AGCACTTCTTACAGCTTTAAAATTTCCCGATAAAATAAAAGGGCTTGTGTGTGTAGCCCCTGCTCCGGATTTTACCGAAA ATATTTGGCAAAATATATCGTTAGACGATCAAAATAAGATACAAAAAGAGGGAATATTAGAAGTAAACAGTAAAAATTGT GAGCATAAATATCCGATGAGCTATAAATTGATAGAAGATGCAAAAAAACATTTATTATTGACAAAGAAACAGATTGATAT CAATATACCGGTACATCTAATTCATGGCATGTTAGATGAAGACGTGCCTTATAATGTTTCAGTAAAATTATTAGAAAAAA TAACTAGTAAACAAATAGTAATGAAGCTAATTAAAGACGGTCACCATAATTTGTCTAGAGAAAAAGATTTAAAGATAATG ACAAATTCCTTAGAAGAAATTATAAGTGACGTTACAAAATAA
Upstream 100 bases:
>100_bases ACTAGAGCAGGAACTACTTGCAAAACAGTATATTTATTGTATCGTTTACTTGACTTTGATGAAGGCATTAAATCTCAATC TATTAAAATAATTATTTAAA
Downstream 100 bases:
>100_bases ATATAGATACCCGTAGTTATTTAGAACTGTGTTGTATGAATTAGACAACTTGCTTTGTGTCATTCCCGCGTAGACGGGAA TCAAGACCAATAACATTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MHKLYNKTQDKFIVYDNYKIINTNIPSVIFLHGLMSSMQSTKAIYLIDYCKKNNYNFIVFDNFGHGNASEQFEDQTISDW LEGVSLILDKLIDKEAILVGSSMGGWLALLTALKFPDKIKGLVCVAPAPDFTENIWQNISLDDQNKIQKEGILEVNSKNC EHKYPMSYKLIEDAKKHLLLTKKQIDINIPVHLIHGMLDEDVPYNVSVKLLEKITSKQIVMKLIKDGHHNLSREKDLKIM TNSLEEIISDVTK
Sequences:
>Translated_253_residues MHKLYNKTQDKFIVYDNYKIINTNIPSVIFLHGLMSSMQSTKAIYLIDYCKKNNYNFIVFDNFGHGNASEQFEDQTISDW LEGVSLILDKLIDKEAILVGSSMGGWLALLTALKFPDKIKGLVCVAPAPDFTENIWQNISLDDQNKIQKEGILEVNSKNC EHKYPMSYKLIEDAKKHLLLTKKQIDINIPVHLIHGMLDEDVPYNVSVKLLEKITSKQIVMKLIKDGHHNLSREKDLKIM TNSLEEIISDVTK >Mature_253_residues MHKLYNKTQDKFIVYDNYKIINTNIPSVIFLHGLMSSMQSTKAIYLIDYCKKNNYNFIVFDNFGHGNASEQFEDQTISDW LEGVSLILDKLIDKEAILVGSSMGGWLALLTALKFPDKIKGLVCVAPAPDFTENIWQNISLDDQNKIQKEGILEVNSKNC EHKYPMSYKLIEDAKKHLLLTKKQIDINIPVHLIHGMLDEDVPYNVSVKLLEKITSKQIVMKLIKDGHHNLSREKDLKIM TNSLEEIISDVTK
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI8923001, Length=236, Percent_Identity=30.9322033898305, Blast_Score=137, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28983; Mature: 28983
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKLYNKTQDKFIVYDNYKIINTNIPSVIFLHGLMSSMQSTKAIYLIDYCKKNNYNFIVF CCCCCCCCCCCEEEEECEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEEEE DNFGHGNASEQFEDQTISDWLEGVSLILDKLIDKEAILVGSSMGGWLALLTALKFPDKIK ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCHHHC GLVCVAPAPDFTENIWQNISLDDQNKIQKEGILEVNSKNCEHKYPMSYKLIEDAKKHLLL CEEEECCCCCHHHHHHHCCCCCCHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHEE TKKQIDINIPVHLIHGMLDEDVPYNVSVKLLEKITSKQIVMKLIKDGHHNLSREKDLKIM EHEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH TNSLEEIISDVTK HHHHHHHHHHHCC >Mature Secondary Structure MHKLYNKTQDKFIVYDNYKIINTNIPSVIFLHGLMSSMQSTKAIYLIDYCKKNNYNFIVF CCCCCCCCCCCEEEEECEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEEEE DNFGHGNASEQFEDQTISDWLEGVSLILDKLIDKEAILVGSSMGGWLALLTALKFPDKIK ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCHHHC GLVCVAPAPDFTENIWQNISLDDQNKIQKEGILEVNSKNCEHKYPMSYKLIEDAKKHLLL CEEEECCCCCHHHHHHHCCCCCCHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHEE TKKQIDINIPVHLIHGMLDEDVPYNVSVKLLEKITSKQIVMKLIKDGHHNLSREKDLKIM EHEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH TNSLEEIISDVTK HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA