Definition | Rickettsia akari str. Hartford, complete genome. |
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Accession | NC_009881 |
Length | 1,231,060 |
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The map label for this gene is 157825590
Identifier: 157825590
GI number: 157825590
Start: 460889
End: 461656
Strand: Reverse
Name: 157825590
Synonym: A1C_02525
Alternate gene names: NA
Gene position: 461656-460889 (Counterclockwise)
Preceding gene: 157825591
Following gene: 157825580
Centisome position: 37.5
GC content: 29.95
Gene sequence:
>768_bases ATGTATAGCAAAATAAATAAAGTTCATGATTTTAAAGAAGTTATACAAGCAATAGAGCAAGCAGATAATACTAGCTTGGT GCTTTTTGACGTAGATGGAGTAATTGTAATGGATAGCGATGAATCTAGGTTAACACATGATTATAGAAAAGCATTAATGG AAGATATTGAAAAAAGACTTACTAAAAAAGAATGCGAATTATTACTTAGCGTTATTCTTAAAGAAAAAAAAGCGAGATTC GTTAATTCAGACATTTTGGAAATATTTGCTCTACTTAAAGCAAAAAATATTCCGGCAATGGGGCTTACTAAACTTCCTAC CGGTAAATTCGGTGTAATTGAAGATATGATTGAATGGAGAGTTCGTGAACTCACTGAATTAAAGGTAAATTTTCAAGAAT TTTCACCGTCAGAAGATGAGATAATAATAGAAGATTTTAATGCCGGTTACGGTAAACCTACATTAAAAGACGGCATAATT TACACTGCAGAATATGATAAAGGAAGCGTACTTGAATATGTATTACGCAAAACAAATTATTATCCGCAATCAATAATATT TATCGATGATATAGAAGAAAACTTATTATCATTACAAGAAACTTGTAAAAAACTAAAAATTAACTATCAAGGATTTGAGT TTACTGGTTCTGCTATCATTCCTGAACCTGATCTTGATGCACAATTAGAAAAGATGAGATTTGAAATTCTAGAAAAAGAA TATAAATGGTTAACGGATGAGGAACTTAAAAAGCATACTTTGTCATAA
Upstream 100 bases:
>100_bases GGATTCACGCCTACGCGGGAATGACATAAAATTATTCGCATTGGTAATATCTAAGGGTAATAACGTGATCTAGATTTTAA ACAATCAATAAAAGATAGAT
Downstream 100 bases:
>100_bases CTTGGAGGTATTTTATTGCAGACAAACTAACTAGATGACACCTATTCACTTTAGGGTCTGATATTATGCCTACAAGGCTT ATTGTTCTTTTTACCTTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MYSKINKVHDFKEVIQAIEQADNTSLVLFDVDGVIVMDSDESRLTHDYRKALMEDIEKRLTKKECELLLSVILKEKKARF VNSDILEIFALLKAKNIPAMGLTKLPTGKFGVIEDMIEWRVRELTELKVNFQEFSPSEDEIIIEDFNAGYGKPTLKDGII YTAEYDKGSVLEYVLRKTNYYPQSIIFIDDIEENLLSLQETCKKLKINYQGFEFTGSAIIPEPDLDAQLEKMRFEILEKE YKWLTDEELKKHTLS
Sequences:
>Translated_255_residues MYSKINKVHDFKEVIQAIEQADNTSLVLFDVDGVIVMDSDESRLTHDYRKALMEDIEKRLTKKECELLLSVILKEKKARF VNSDILEIFALLKAKNIPAMGLTKLPTGKFGVIEDMIEWRVRELTELKVNFQEFSPSEDEIIIEDFNAGYGKPTLKDGII YTAEYDKGSVLEYVLRKTNYYPQSIIFIDDIEENLLSLQETCKKLKINYQGFEFTGSAIIPEPDLDAQLEKMRFEILEKE YKWLTDEELKKHTLS >Mature_255_residues MYSKINKVHDFKEVIQAIEQADNTSLVLFDVDGVIVMDSDESRLTHDYRKALMEDIEKRLTKKECELLLSVILKEKKARF VNSDILEIFALLKAKNIPAMGLTKLPTGKFGVIEDMIEWRVRELTELKVNFQEFSPSEDEIIIEDFNAGYGKPTLKDGII YTAEYDKGSVLEYVLRKTNYYPQSIIFIDDIEENLLSLQETCKKLKINYQGFEFTGSAIIPEPDLDAQLEKMRFEILEKE YKWLTDEELKKHTLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29652; Mature: 29652
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSKINKVHDFKEVIQAIEQADNTSLVLFDVDGVIVMDSDESRLTHDYRKALMEDIEKRL CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHH TKKECELLLSVILKEKKARFVNSDILEIFALLKAKNIPAMGLTKLPTGKFGVIEDMIEWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH VRELTELKVNFQEFSPSEDEIIIEDFNAGYGKPTLKDGIIYTAEYDKGSVLEYVLRKTNY HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCC YPQSIIFIDDIEENLLSLQETCKKLKINYQGFEFTGSAIIPEPDLDAQLEKMRFEILEKE CCCEEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCEECCCCCCHHHHHHHHHHHHHHH YKWLTDEELKKHTLS HHCCCHHHHHHHCCC >Mature Secondary Structure MYSKINKVHDFKEVIQAIEQADNTSLVLFDVDGVIVMDSDESRLTHDYRKALMEDIEKRL CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHH TKKECELLLSVILKEKKARFVNSDILEIFALLKAKNIPAMGLTKLPTGKFGVIEDMIEWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH VRELTELKVNFQEFSPSEDEIIIEDFNAGYGKPTLKDGIIYTAEYDKGSVLEYVLRKTNY HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCC YPQSIIFIDDIEENLLSLQETCKKLKINYQGFEFTGSAIIPEPDLDAQLEKMRFEILEKE CCCEEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCEECCCCCCHHHHHHHHHHHHHHH YKWLTDEELKKHTLS HHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA