| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is wecB [C]
Identifier: 157825585
GI number: 157825585
Start: 454345
End: 455604
Strand: Direct
Name: wecB [C]
Synonym: A1C_02490
Alternate gene names: 157825585
Gene position: 454345-455604 (Clockwise)
Preceding gene: 157825584
Following gene: 157825586
Centisome position: 36.91
GC content: 36.43
Gene sequence:
>1260_bases ATGCTTAAGGTAATGACTATTGTCGGTACTCGTCCTGAACTGATTAAACTATGCTGCGTGATTTCCGAGTTTGATAAATA TACTAATCATATCCTAGTTCACACCGGTCAAAATTATGCATATGAATTAAATCAGGTGTTTTTTGATGATATGGGTATTA GAAAACCCGATTATTTCTTAGAAGTAGCAGCAGATAATACAGCAAAATCTATTGGGCTTATTATCGAACAAGTTGACGCA GTCCTTGAGAAAGAAAAGCCCGATGCCGTTTTGTTTTACGGTGATACTAATTCCTGCTTATCGGCAATTGCTGCTAAACG TCGTAAAATTCCTATTTTCCATATGGAAGCAGGAAATCGTTGTTTTGATCAAAGAGTACCTGAAGAAATAAACCGTAAAA TCATTGATCATATTAGTGATGTGAACATTACGTTAACCGAGCATGCAAGACGTTATTTAATTTCTGAAGGTTTACCGCCT GAGCTTATTTTTAAATCAGGCTCGCATATGCCTGAAGTTCTTGACCGTTTTATGCCTAAAATATTAAAGTCGGATATTTT AGATACATTATCATTACAAGCAAAGCAGTATTTCTTAATTAGCTCACATCGTGAGGAAAATGTTGACGTTAAAAATAATC TGCAAGAATTATTAAGTAGTTTACAAACGCTTATTAAAGAGTATAATTTCCCCGTAATCTTCTCAACACACCCAAGGACT AAAAAAAGACTTGAGGATTTAGGTGGTGGGAAAGAGCTTGGTGATAAAATAAGGTTTTTACCGGCTTTTAGTTTTACGGA TTACGTCAAACTTCAGATGAATGCGTTTTGTATTTTATCCGATAGCGGTACTATTACTGAAGAAGCCTCTATACTTAATT TACCTGCTTTAAACATTCGAGAAGCACATGAGCGTCCTGAAGGTATGGACGCCGGAACGCTTATTATGTCGGGCTTTAAT GCTGCACGGGTACTACAATCGGTGAAATCAATTACGGCAGAACACGAGAATAATAAAGATACGGAAGAAATATACTCAAA TGATTTGGAGAATTGTAATGTAAAACGAGGAACGAGCACGCACAGCCTATACTTAATAGGTGGGCATGCGAGTTCTCCAA AGTTTTGCAGAGATAATTCTTCAAAGCAGAAGAGTATTGTGTCGGATTATGCTGCAGCAGGACTTGTATCAAAGAAAATA TTGCGTATAGTTTTAAGTTATGTGGATTATGTTAACCGTACGGTGTGGTTTAAGAAGTAA
Upstream 100 bases:
>100_bases CTTTTAGAGGATTACACTTCGCATAATACAAAACGTTTAAATTTAGAAGAAGTAAAAAAGTTGTTGCTGACTCTTGATTA CATACAAGAGGAGCTAAAAA
Downstream 100 bases:
>100_bases CATTATTCATTGTTATCATATCAACAACATGAAATTCTTTAAATTAATAAAACTTAACCTTGTATTTTTAAGTGTTTTTT TACTAATAACTCTTATATCT
Product: UDP-N-acetylglucosamine 2-epimerase
Products: UDP-N-acetyl-D-mannosamine
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MLKVMTIVGTRPELIKLCCVISEFDKYTNHILVHTGQNYAYELNQVFFDDMGIRKPDYFLEVAADNTAKSIGLIIEQVDA VLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGNRCFDQRVPEEINRKIIDHISDVNITLTEHARRYLISEGLPP ELIFKSGSHMPEVLDRFMPKILKSDILDTLSLQAKQYFLISSHREENVDVKNNLQELLSSLQTLIKEYNFPVIFSTHPRT KKRLEDLGGGKELGDKIRFLPAFSFTDYVKLQMNAFCILSDSGTITEEASILNLPALNIREAHERPEGMDAGTLIMSGFN AARVLQSVKSITAEHENNKDTEEIYSNDLENCNVKRGTSTHSLYLIGGHASSPKFCRDNSSKQKSIVSDYAAAGLVSKKI LRIVLSYVDYVNRTVWFKK
Sequences:
>Translated_419_residues MLKVMTIVGTRPELIKLCCVISEFDKYTNHILVHTGQNYAYELNQVFFDDMGIRKPDYFLEVAADNTAKSIGLIIEQVDA VLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGNRCFDQRVPEEINRKIIDHISDVNITLTEHARRYLISEGLPP ELIFKSGSHMPEVLDRFMPKILKSDILDTLSLQAKQYFLISSHREENVDVKNNLQELLSSLQTLIKEYNFPVIFSTHPRT KKRLEDLGGGKELGDKIRFLPAFSFTDYVKLQMNAFCILSDSGTITEEASILNLPALNIREAHERPEGMDAGTLIMSGFN AARVLQSVKSITAEHENNKDTEEIYSNDLENCNVKRGTSTHSLYLIGGHASSPKFCRDNSSKQKSIVSDYAAAGLVSKKI LRIVLSYVDYVNRTVWFKK >Mature_419_residues MLKVMTIVGTRPELIKLCCVISEFDKYTNHILVHTGQNYAYELNQVFFDDMGIRKPDYFLEVAADNTAKSIGLIIEQVDA VLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGNRCFDQRVPEEINRKIIDHISDVNITLTEHARRYLISEGLPP ELIFKSGSHMPEVLDRFMPKILKSDILDTLSLQAKQYFLISSHREENVDVKNNLQELLSSLQTLIKEYNFPVIFSTHPRT KKRLEDLGGGKELGDKIRFLPAFSFTDYVKLQMNAFCILSDSGTITEEASILNLPALNIREAHERPEGMDAGTLIMSGFN AARVLQSVKSITAEHENNKDTEEIYSNDLENCNVKRGTSTHSLYLIGGHASSPKFCRDNSSKQKSIVSDYAAAGLVSKKI LRIVLSYVDYVNRTVWFKK
Specific function: Catalyzes The Reversible Epimerization At C-2 Of UDP-N- Acetylglucosamine (UDP-Glcnac) And Thereby Provides Bacteria With UDP-N-Acetylmannosamine (UDP-Mannac), The Activated Donor Of Mannac Residues. Also Involved In Bacteriophage N4 Adsorption. [C]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=351, Percent_Identity=28.7749287749288, Blast_Score=111, Evalue=9e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: 5.1.3.14
Molecular weight: Translated: 47435; Mature: 47435
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKVMTIVGTRPELIKLCCVISEFDKYTNHILVHTGQNYAYELNQVFFDDMGIRKPDYFL CEEEEEEECCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEE EVAADNTAKSIGLIIEQVDAVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGNR EEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEECCCCC CFDQRVPEEINRKIIDHISDVNITLTEHARRYLISEGLPPELIFKSGSHMPEVLDRFMPK HHHHCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHH ILKSDILDTLSLQAKQYFLISSHREENVDVKNNLQELLSSLQTLIKEYNFPVIFSTHPRT HHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCH KKRLEDLGGGKELGDKIRFLPAFSFTDYVKLQMNAFCILSDSGTITEEASILNLPALNIR HHHHHHCCCCHHHHHHEEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCEECCCCCCHH EAHERPEGMDAGTLIMSGFNAARVLQSVKSITAEHENNKDTEEIYSNDLENCNVKRGTST HHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCC HSLYLIGGHASSPKFCRDNSSKQKSIVSDYAAAGLVSKKILRIVLSYVDYVNRTVWFKK CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCC >Mature Secondary Structure MLKVMTIVGTRPELIKLCCVISEFDKYTNHILVHTGQNYAYELNQVFFDDMGIRKPDYFL CEEEEEEECCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEE EVAADNTAKSIGLIIEQVDAVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGNR EEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEECCCCC CFDQRVPEEINRKIIDHISDVNITLTEHARRYLISEGLPPELIFKSGSHMPEVLDRFMPK HHHHCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHH ILKSDILDTLSLQAKQYFLISSHREENVDVKNNLQELLSSLQTLIKEYNFPVIFSTHPRT HHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCH KKRLEDLGGGKELGDKIRFLPAFSFTDYVKLQMNAFCILSDSGTITEEASILNLPALNIR HHHHHHCCCCHHHHHHEEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCEECCCCCCHH EAHERPEGMDAGTLIMSGFNAARVLQSVKSITAEHENNKDTEEIYSNDLENCNVKRGTST HHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCC HSLYLIGGHASSPKFCRDNSSKQKSIVSDYAAAGLVSKKILRIVLSYVDYVNRTVWFKK CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: UDP-N-acetylglucosamine [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.63 {UDP-N-acetylglucosamine}} 1 {UDP-N-acetylmannosamine}} 0.5 {UDP-N-acetylmannosamine}} [C]
Substrates: UDP-N-acetyl-D-glucosamine
Specific reaction: UDP-N-acetyl-D-glucosamine = UDP-N-acetyl-D-mannosamine
General reaction: Epimerization [C]
Inhibitor: PCMB [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA