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The map label for this gene is recN [H]

Identifier: 157825368

GI number: 157825368

Start: 246246

End: 247886

Strand: Reverse

Name: recN [H]

Synonym: A1C_01310

Alternate gene names: 157825368

Gene position: 247886-246246 (Counterclockwise)

Preceding gene: 157825369

Following gene: 157825367

Centisome position: 20.14

GC content: 33.39

Gene sequence:

>1641_bases
ATGTTTCATAGTCTCTCAGTTAAACACTTCATTCTGATAGACGAGCTGGAAATTGAGTTTAATAAAGGTTTATGCGTTAT
TACCGGCGAAACGGGAGCCGGTAAATCTATTTTACTTGATGCTATTTTATTTTGCCTTGGTTATAAAACTTCAAATAATA
TAATAAAGCGTGGAAAAGACTACGCTGTTGTTAATATAATATTCTCTTTAAATGAGGAAATAAAAAATTTTCTGATTCAA
AATTTGATTGAACCTGAAGAATTATTGCTTGTAAAATGTTTGCAAAAAGCCAAAGGACGAAAAAAATTTTTCATTAATAA
TCAAGTAGTTAATAAGGCTATAATGCAGCAATTAGCTACTTATTTATTCGAACTGCATGGACAAAATAATAATATTTCCC
TTCTAGAAGCAAGTACGCAGCGTGATATTTTAGATAGTTATGGAAATTTTTTGGATTTTCGTGCAAGACTTTCCAAATGC
TATCAAACTTGGCAAAATATCAAAAACGAAATTGCCGAAATAACACTTAAACAAAATGCTATAGAACAGGAAATTGATTA
TTTGAGCTTTGCAACGGAAGAATTAACTAAACTGAACATTCAAACAGGAGAGGAGGAAAAATTAACAAATCTACGAAAAA
ATTTGAAAAATAAAGATAAGGATTTACAGCTAATAAAAGATATTCTGGAACAGATTAATAACCCTGAAATAAATACATCG
ATTAATAGAGCAGAGAAATTATTAGCAAGGCAAGGCAATAATGAGCATTTTGAAGCTGTCGCTACAAGTTTAGAGGAAGC
ATATAATAATCTAGAAGAAGCACGCCAAGAATTATCAAATCTGTTGGATAGTTTTAATTATGAAGAATATAATCTTGAAG
AAACAGAAGAACGATTATTTTTAATCAAAGCTATTAGCCGTAAATATAATGTTCCTGCGGATGAGTTAGGCGTATTTTTA
GATAAAGCTTCAGAACAGCTCGGTATATTAAAAAATAAAATAGCAAATAGTAACGAGTTAAAAGCTCAAGAAGTGCTATT
ACAGAAACAATATTATGAACTAGCGAGCGATTTATCTGCAAAGCGTCTTATTGCCGCAAAACGTCTAGAAGAATCGTTGC
ATCAGGAGCTAAAACAGCTTAAAATGGCGAAAGCAATTTTTGAGATTAAGATAGAAGCTAAAAAAGAGCCGACAGCCAGC
GGCAATGACGATATTGTGTTTAAAGCTTCTACTAACCCAGGAACAAGAGCGGAAGCAATGAATAAAATCGCTTCCGGCGG
TGAATTATCAAGGTTCATGCTTGCTTTAAAAACTTCTTTGTTTGATAAAATGGTAAAACCGGCTATTATATTTGATGAAA
TAGATGTCGGGATTAGCGGAGAGGTCGCAGATAAAGTAGGTGAGCGGTTAAAAAAGCTTAGCTCAGTTACTCAGGTAATA
GTTATTACGCACCAGCCGCAAATAGCAGGTAAAGCGGATTTGCATATAAAAATCGAGAAAACACAGCTAGAGAAAGAAAC
GAAAGTCACGGTAAAAACTTTAAATTCAGCTGAAAGACAGGAGGAACTCGCTCGCATGATTTCAGGTAAAACAATCACCG
AGGCAAGTTTAAAAGCAGCAAAGGAGTTATTGCATTTGTAA

Upstream 100 bases:

>100_bases
ATAACTTAGTATTTTAAACTGGACCCCGTGGTCAAGTCACGGGATGACGGTAAAAAAAACGATCCATGCAATAACACTTA
TAAAAATTAAAGAGTAGTGT

Downstream 100 bases:

>100_bases
TCAACGTCATTGCGAGGAGCGAAACGACACGGCAATCCAGACCAATAATTAAAAAATTCTGATTTACAGAGTTTTTAACT
AGATTGGTTCGTCGAATTGT

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MFHSLSVKHFILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNIIKRGKDYAVVNIIFSLNEEIKNFLIQ
NLIEPEELLLVKCLQKAKGRKKFFINNQVVNKAIMQQLATYLFELHGQNNNISLLEASTQRDILDSYGNFLDFRARLSKC
YQTWQNIKNEIAEITLKQNAIEQEIDYLSFATEELTKLNIQTGEEEKLTNLRKNLKNKDKDLQLIKDILEQINNPEINTS
INRAEKLLARQGNNEHFEAVATSLEEAYNNLEEARQELSNLLDSFNYEEYNLEETEERLFLIKAISRKYNVPADELGVFL
DKASEQLGILKNKIANSNELKAQEVLLQKQYYELASDLSAKRLIAAKRLEESLHQELKQLKMAKAIFEIKIEAKKEPTAS
GNDDIVFKASTNPGTRAEAMNKIASGGELSRFMLALKTSLFDKMVKPAIIFDEIDVGISGEVADKVGERLKKLSSVTQVI
VITHQPQIAGKADLHIKIEKTQLEKETKVTVKTLNSAERQEELARMISGKTITEASLKAAKELLHL

Sequences:

>Translated_546_residues
MFHSLSVKHFILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNIIKRGKDYAVVNIIFSLNEEIKNFLIQ
NLIEPEELLLVKCLQKAKGRKKFFINNQVVNKAIMQQLATYLFELHGQNNNISLLEASTQRDILDSYGNFLDFRARLSKC
YQTWQNIKNEIAEITLKQNAIEQEIDYLSFATEELTKLNIQTGEEEKLTNLRKNLKNKDKDLQLIKDILEQINNPEINTS
INRAEKLLARQGNNEHFEAVATSLEEAYNNLEEARQELSNLLDSFNYEEYNLEETEERLFLIKAISRKYNVPADELGVFL
DKASEQLGILKNKIANSNELKAQEVLLQKQYYELASDLSAKRLIAAKRLEESLHQELKQLKMAKAIFEIKIEAKKEPTAS
GNDDIVFKASTNPGTRAEAMNKIASGGELSRFMLALKTSLFDKMVKPAIIFDEIDVGISGEVADKVGERLKKLSSVTQVI
VITHQPQIAGKADLHIKIEKTQLEKETKVTVKTLNSAERQEELARMISGKTITEASLKAAKELLHL
>Mature_546_residues
MFHSLSVKHFILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNIIKRGKDYAVVNIIFSLNEEIKNFLIQ
NLIEPEELLLVKCLQKAKGRKKFFINNQVVNKAIMQQLATYLFELHGQNNNISLLEASTQRDILDSYGNFLDFRARLSKC
YQTWQNIKNEIAEITLKQNAIEQEIDYLSFATEELTKLNIQTGEEEKLTNLRKNLKNKDKDLQLIKDILEQINNPEINTS
INRAEKLLARQGNNEHFEAVATSLEEAYNNLEEARQELSNLLDSFNYEEYNLEETEERLFLIKAISRKYNVPADELGVFL
DKASEQLGILKNKIANSNELKAQEVLLQKQYYELASDLSAKRLIAAKRLEESLHQELKQLKMAKAIFEIKIEAKKEPTAS
GNDDIVFKASTNPGTRAEAMNKIASGGELSRFMLALKTSLFDKMVKPAIIFDEIDVGISGEVADKVGERLKKLSSVTQVI
VITHQPQIAGKADLHIKIEKTQLEKETKVTVKTLNSAERQEELARMISGKTITEASLKAAKELLHL

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=552, Percent_Identity=31.7028985507246, Blast_Score=255, Evalue=4e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61910; Mature: 61910

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHSLSVKHFILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNIIKRGKD
CCCCCCCEEEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCC
YAVVNIIFSLNEEIKNFLIQNLIEPEELLLVKCLQKAKGRKKFFINNQVVNKAIMQQLAT
EEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH
YLFELHGQNNNISLLEASTQRDILDSYGNFLDFRARLSKCYQTWQNIKNEIAEITLKQNA
HHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEQEIDYLSFATEELTKLNIQTGEEEKLTNLRKNLKNKDKDLQLIKDILEQINNPEINTS
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCH
INRAEKLLARQGNNEHFEAVATSLEEAYNNLEEARQELSNLLDSFNYEEYNLEETEERLF
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LIKAISRKYNVPADELGVFLDKASEQLGILKNKIANSNELKAQEVLLQKQYYELASDLSA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
KRLIAAKRLEESLHQELKQLKMAKAIFEIKIEAKKEPTASGNDDIVFKASTNPGTRAEAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEECCCCCHHHHHH
NKIASGGELSRFMLALKTSLFDKMVKPAIIFDEIDVGISGEVADKVGERLKKLSSVTQVI
HHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEE
VITHQPQIAGKADLHIKIEKTQLEKETKVTVKTLNSAERQEELARMISGKTITEASLKAA
EEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KELLHL
HHHHCC
>Mature Secondary Structure
MFHSLSVKHFILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNIIKRGKD
CCCCCCCEEEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCC
YAVVNIIFSLNEEIKNFLIQNLIEPEELLLVKCLQKAKGRKKFFINNQVVNKAIMQQLAT
EEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH
YLFELHGQNNNISLLEASTQRDILDSYGNFLDFRARLSKCYQTWQNIKNEIAEITLKQNA
HHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEQEIDYLSFATEELTKLNIQTGEEEKLTNLRKNLKNKDKDLQLIKDILEQINNPEINTS
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCH
INRAEKLLARQGNNEHFEAVATSLEEAYNNLEEARQELSNLLDSFNYEEYNLEETEERLF
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LIKAISRKYNVPADELGVFLDKASEQLGILKNKIANSNELKAQEVLLQKQYYELASDLSA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
KRLIAAKRLEESLHQELKQLKMAKAIFEIKIEAKKEPTASGNDDIVFKASTNPGTRAEAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEECCCCCHHHHHH
NKIASGGELSRFMLALKTSLFDKMVKPAIIFDEIDVGISGEVADKVGERLKKLSSVTQVI
HHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEE
VITHQPQIAGKADLHIKIEKTQLEKETKVTVKTLNSAERQEELARMISGKTITEASLKAA
EEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KELLHL
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA