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The map label for this gene is rdoA [H]

Identifier: 157373121

GI number: 157373121

Start: 5421967

End: 5422953

Strand: Reverse

Name: rdoA [H]

Synonym: Spro_4890

Alternate gene names: 157373121

Gene position: 5422953-5421967 (Counterclockwise)

Preceding gene: 157373122

Following gene: 157373120

Centisome position: 99.52

GC content: 52.68

Gene sequence:

>987_bases
ATGAACAACTCAGCTTTTAATTTTCAGACCCTGTCGCCCGACCTGATTATGGACGCGTTGGAGGGTGTTGGTCTGCGTGT
AGATTCCGGGCTGACAGCGCTTAACAGCTATGAGAACCGCGTCTATCAGTTTATGGACGAAGATCGTAAGCGTTACGTGG
TGAAGTTTTATCGGCCTGAACGCTGGAGTGCAGAGCAAATTGGTGAAGAACATCAGTTCTCTCATGATCTTGCCCTGGCA
GAGATCCCGGCAGTTGCGCCACTGGCCCTGCAGGGCCAAACGCTGCATACACACAGCAGTTTCTTTTTTACTGTTTTTCC
CAGCGTTGGCGGGCGGCAGTATGAGATCGATAATCTCGATCAACTGGAGTGGGTGGGGCGTTTCCTGGGGCGTATTCATC
AGGTAGGCAGTGAAAGCCTGTTTGTGAAGCGCCCGACAATGGGCATTGAGGAATATCTCACTGCGCCACGTCAGGTATTG
GCTAGCTGTGAACTGTTGCCGAAGGCCCAGCGCGAAAATTTCCTGAATGCGACCGACAGGTTGATTGAGGCGATTAAGCA
ACATTGGCATCTGGACTGGCAGCCGCGACGTTTGCACGGCGATTGCCATCCGGGCAATATCCTGTGGCGTGATGGTCCGC
TGTTTGTTGATCTGGATGACGCGCGAAATGGGCCGGCAATACAGGATCTGTGGATGCTGTTGCATGGTGAACGTCGCGAT
CGCCTGATGCAGTTAGATATTCTGCTGGAAGCTTACTCCGAGTTTGCCGAGTTTGATCAAAGTGAATTAGCGTTGATCGA
GCCGCTGCGGGCCATGCGCATGGTGTACTACCTGGCATGGGTTGCTCGTCGTTGGCAAGATCCCGCGTTTCCTAAAAGTT
TTCCGTGGATGGCGGAGTCTGATTTTTGGTTATCTCAGACGGCGGCATTCACCGAGCAGGTTAAGCTGTTACAGGAACCC
CCTCTGCAGCTGATGCCAATGTATTGA

Upstream 100 bases:

>100_bases
CGTGCGGTAAGGTGAACCAGTTACTCGTGAAACCTGCCATTAATGCTACTATTTCTCATTCCCGGCACAGTGATGTCACC
AACCGAAACCGAATGTTGTT

Downstream 100 bases:

>100_bases
AGCTTTAACACAATGGAGAGTTTAGTCTTATGAAGAAAATTTGGTTGGCACTCGTTGGCATGGTAATGGCATTCAGTGCC
TCGGCTGCGCAATTTAGCGA

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MNNSAFNFQTLSPDLIMDALEGVGLRVDSGLTALNSYENRVYQFMDEDRKRYVVKFYRPERWSAEQIGEEHQFSHDLALA
EIPAVAPLALQGQTLHTHSSFFFTVFPSVGGRQYEIDNLDQLEWVGRFLGRIHQVGSESLFVKRPTMGIEEYLTAPRQVL
ASCELLPKAQRENFLNATDRLIEAIKQHWHLDWQPRRLHGDCHPGNILWRDGPLFVDLDDARNGPAIQDLWMLLHGERRD
RLMQLDILLEAYSEFAEFDQSELALIEPLRAMRMVYYLAWVARRWQDPAFPKSFPWMAESDFWLSQTAAFTEQVKLLQEP
PLQLMPMY

Sequences:

>Translated_328_residues
MNNSAFNFQTLSPDLIMDALEGVGLRVDSGLTALNSYENRVYQFMDEDRKRYVVKFYRPERWSAEQIGEEHQFSHDLALA
EIPAVAPLALQGQTLHTHSSFFFTVFPSVGGRQYEIDNLDQLEWVGRFLGRIHQVGSESLFVKRPTMGIEEYLTAPRQVL
ASCELLPKAQRENFLNATDRLIEAIKQHWHLDWQPRRLHGDCHPGNILWRDGPLFVDLDDARNGPAIQDLWMLLHGERRD
RLMQLDILLEAYSEFAEFDQSELALIEPLRAMRMVYYLAWVARRWQDPAFPKSFPWMAESDFWLSQTAAFTEQVKLLQEP
PLQLMPMY
>Mature_328_residues
MNNSAFNFQTLSPDLIMDALEGVGLRVDSGLTALNSYENRVYQFMDEDRKRYVVKFYRPERWSAEQIGEEHQFSHDLALA
EIPAVAPLALQGQTLHTHSSFFFTVFPSVGGRQYEIDNLDQLEWVGRFLGRIHQVGSESLFVKRPTMGIEEYLTAPRQVL
ASCELLPKAQRENFLNATDRLIEAIKQHWHLDWQPRRLHGDCHPGNILWRDGPLFVDLDDARNGPAIQDLWMLLHGERRD
RLMQLDILLEAYSEFAEFDQSELALIEPLRAMRMVYYLAWVARRWQDPAFPKSFPWMAESDFWLSQTAAFTEQVKLLQEP
PLQLMPMY

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=328, Percent_Identity=65.8536585365854, Blast_Score=473, Evalue=1e-134,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 38246; Mature: 38246

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSAFNFQTLSPDLIMDALEGVGLRVDSGLTALNSYENRVYQFMDEDRKRYVVKFYRPE
CCCCCCEEEECCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCC
RWSAEQIGEEHQFSHDLALAEIPAVAPLALQGQTLHTHSSFFFTVFPSVGGRQYEIDNLD
CCCHHHCCHHHHHHHHHHHHHCCCCCCEEECCCEEEECCCEEEEECCCCCCCEEECCCCH
QLEWVGRFLGRIHQVGSESLFVKRPTMGIEEYLTAPRQVLASCELLPKAQRENFLNATDR
HHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LIEAIKQHWHLDWQPRRLHGDCHPGNILWRDGPLFVDLDDARNGPAIQDLWMLLHGERRD
HHHHHHHHCCCCCCCHHCCCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHCCHHH
RLMQLDILLEAYSEFAEFDQSELALIEPLRAMRMVYYLAWVARRWQDPAFPKSFPWMAES
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
DFWLSQTAAFTEQVKLLQEPPLQLMPMY
CCHHHHHHHHHHHHHHHHCCCHHEECCC
>Mature Secondary Structure
MNNSAFNFQTLSPDLIMDALEGVGLRVDSGLTALNSYENRVYQFMDEDRKRYVVKFYRPE
CCCCCCEEEECCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCC
RWSAEQIGEEHQFSHDLALAEIPAVAPLALQGQTLHTHSSFFFTVFPSVGGRQYEIDNLD
CCCHHHCCHHHHHHHHHHHHHCCCCCCEEECCCEEEECCCEEEEECCCCCCCEEECCCCH
QLEWVGRFLGRIHQVGSESLFVKRPTMGIEEYLTAPRQVLASCELLPKAQRENFLNATDR
HHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LIEAIKQHWHLDWQPRRLHGDCHPGNILWRDGPLFVDLDDARNGPAIQDLWMLLHGERRD
HHHHHHHHCCCCCCCHHCCCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHCCHHH
RLMQLDILLEAYSEFAEFDQSELALIEPLRAMRMVYYLAWVARRWQDPAFPKSFPWMAES
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
DFWLSQTAAFTEQVKLLQEPPLQLMPMY
CCHHHHHHHHHHHHHHHHCCCHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]