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The map label for this gene is secB [H]

Identifier: 157373048

GI number: 157373048

Start: 5334481

End: 5334951

Strand: Reverse

Name: secB [H]

Synonym: Spro_4816

Alternate gene names: 157373048

Gene position: 5334951-5334481 (Counterclockwise)

Preceding gene: 157373049

Following gene: 157373047

Centisome position: 97.91

GC content: 54.35

Gene sequence:

>471_bases
ATGTCAGAACAAAACAGCACAGAGATGGCTTTCCAGATCCAGCGTATTTACACCAAGGATATCTCCTTCGAAGCGCCAAA
GGCTCCGCAGGTTTTCCAGCAGGAATGGCAGCCAGAAGTTAAACTGGATCTAGATACCGCTTCCAGCCAGTTGGCTGATG
AAGTGTATGAAGTTGTACTGCGCGTAACCGTGACGGCCTCTCTGGGCGAAGAAACTGCGTTCCTGTGTGAAGTGCAGCAG
GCGGGTATCTTCTCCGTAGCGGGCATCGACGGTACGCAGCTGGCGCATTGCCTGGGTGCATACTGCCCGAACATTCTGTT
CCCGTATGCGCGTGAGTGCATCACCAGCCTGGTTTCTCGCGGTACATTCCCGCAGCTGAATCTGGCACCGGTTAACTTTG
ACGCGCTGTTCATGAACTATCTGCAGCAGCAGTCAGAAGGCGAAGGTGCCGCACCACATCAGGATGCCTGA

Upstream 100 bases:

>100_bases
ATGAACTCGATGCTCGTGGTGGTCTGGATCCGCTGCTTTAAGCGGATGACTGCCGGTTACTGAGTATCAATAAGGACGTT
TAACCAAGGGTATTACACAC

Downstream 100 bases:

>100_bases
TGAACACCGTCAATGCTTCAATGACTGTAATCGGTGCCGGCTCGTACGGCACCGCATTAGCTATTACGCTGGCGCGTAAC
GGCCACTCCGTGGTGCTGTG

Product: preprotein translocase subunit SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSEQNSTEMAFQIQRIYTKDISFEAPKAPQVFQQEWQPEVKLDLDTASSQLADEVYEVVLRVTVTASLGEETAFLCEVQQ
AGIFSVAGIDGTQLAHCLGAYCPNILFPYARECITSLVSRGTFPQLNLAPVNFDALFMNYLQQQSEGEGAAPHQDA

Sequences:

>Translated_156_residues
MSEQNSTEMAFQIQRIYTKDISFEAPKAPQVFQQEWQPEVKLDLDTASSQLADEVYEVVLRVTVTASLGEETAFLCEVQQ
AGIFSVAGIDGTQLAHCLGAYCPNILFPYARECITSLVSRGTFPQLNLAPVNFDALFMNYLQQQSEGEGAAPHQDA
>Mature_155_residues
SEQNSTEMAFQIQRIYTKDISFEAPKAPQVFQQEWQPEVKLDLDTASSQLADEVYEVVLRVTVTASLGEETAFLCEVQQA
GIFSVAGIDGTQLAHCLGAYCPNILFPYARECITSLVSRGTFPQLNLAPVNFDALFMNYLQQQSEGEGAAPHQDA

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family [H]

Homologues:

Organism=Escherichia coli, GI1790038, Length=156, Percent_Identity=89.1025641025641, Blast_Score=293, Evalue=4e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003708 [H]

Pfam domain/function: PF02556 SecB [H]

EC number: NA

Molecular weight: Translated: 17228; Mature: 17097

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQNSTEMAFQIQRIYTKDISFEAPKAPQVFQQEWQPEVKLDLDTASSQLADEVYEVVL
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEECCHHHHHHHHHHHHHHH
RVTVTASLGEETAFLCEVQQAGIFSVAGIDGTQLAHCLGAYCPNILFPYARECITSLVSR
HHHHHHHCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTFPQLNLAPVNFDALFMNYLQQQSEGEGAAPHQDA
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SEQNSTEMAFQIQRIYTKDISFEAPKAPQVFQQEWQPEVKLDLDTASSQLADEVYEVVL
CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEECCHHHHHHHHHHHHHHH
RVTVTASLGEETAFLCEVQQAGIFSVAGIDGTQLAHCLGAYCPNILFPYARECITSLVSR
HHHHHHHCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTFPQLNLAPVNFDALFMNYLQQQSEGEGAAPHQDA
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA