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The map label for this gene is ytfQ [H]

Identifier: 157373000

GI number: 157373000

Start: 5275274

End: 5276230

Strand: Reverse

Name: ytfQ [H]

Synonym: Spro_4768

Alternate gene names: 157373000

Gene position: 5276230-5275274 (Counterclockwise)

Preceding gene: 157373001

Following gene: 157372999

Centisome position: 96.83

GC content: 52.77

Gene sequence:

>957_bases
ATGATTAAACGTCTGCTGTTAGCGGCCGCCATCACTGGCGCATTGATAAGTACGGTACAGGCGGCACCGCTGGTTGTCGG
TTTTTCTCAGATTGGTTCGGAATCGGGCTGGCGTTCTGCCGAAACCAAGGTGTCGAAACAGGAAGCGGAAAAACGCGGTA
TTACGTTAAAAATAGCCGATGCGCAGCAAAAACAGGAAAACCAGATCAAAGCGGTCAGATCCTTCATCGCCCAGGGTGTT
GATGCCATTTTCATTGCACCGGTAGTCGCCACCGGGTGGACCCCGGTACTGCAAGAGGCCAAAGAGGCCAAGATCCCGGT
ATTCCTGCTCGACCGGATGATCGAAGTGAACGATCCCTCGCTCTATACCGCAGCCGTGGCGTCCGACAGCGTGCATGAAG
GTAAAGTCGCAGGAGAGTGGCTGGTGAAAGAGGTCGCCGGCAAGCCCTGTAACGTGGTGGAACTGCAGGGGACCGTGGGC
TCCAGCGTCGCCATTAACCGCAAGAAAGGCTTTGCCGACGGCATAGCCACCGCTGCCAACGTTAAAATCATCCGCTCGCA
ATCCGGCGACTTTACCCGCAGCAAGGGCAAAGAAGTGATGGAAAGCTTTATCAAGGCCGAGCAAAACGGCAAAAATATTT
GTGCGGTGTATGCGCATAACGACGATATGGCGATTGGTGCTATTCAGGCAATCAAAGAGGCGGGTTTAAAACCGGGCTCA
CAGATCAAAATTGTCTCTATCGACGGTGTTCCTGACATATTCAAAGCGATGATGAATGGTGAAGCTAATGCCACGGTTGA
ACTGACGCCGAATATGGCCGGCCCGGCGTTCGATGCGTTGTTGGCGATGAAGAAAGATGGCACTCAGCCGCCGAAGTTTA
TCCAGACTGAATCGAAACTGCTGCAGCCAGATACCGCGAAACAGGAATTCGAGCTGAAGAAAAGTATGGGTTATTAA

Upstream 100 bases:

>100_bases
TTGGATACCCACTTCACCAGAAAAATATGCAGCATACACAACAACAGTTACCACTGCCTGAGGCCGCCTGATGCCTGGGC
AGTGCGGGGAGAACACAAAC

Downstream 100 bases:

>100_bases
TCCACTTACCGGCGGGACAGAAGATGGACACATCTCAGACCACGTTATTGGCGATTAAGGGATTATCCGTTGAGTTTCCT
GGCGTTAAAGCGCTGGAGCA

Product: periplasmic binding protein/LacI transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MIKRLLLAAAITGALISTVQAAPLVVGFSQIGSESGWRSAETKVSKQEAEKRGITLKIADAQQKQENQIKAVRSFIAQGV
DAIFIAPVVATGWTPVLQEAKEAKIPVFLLDRMIEVNDPSLYTAAVASDSVHEGKVAGEWLVKEVAGKPCNVVELQGTVG
SSVAINRKKGFADGIATAANVKIIRSQSGDFTRSKGKEVMESFIKAEQNGKNICAVYAHNDDMAIGAIQAIKEAGLKPGS
QIKIVSIDGVPDIFKAMMNGEANATVELTPNMAGPAFDALLAMKKDGTQPPKFIQTESKLLQPDTAKQEFELKKSMGY

Sequences:

>Translated_318_residues
MIKRLLLAAAITGALISTVQAAPLVVGFSQIGSESGWRSAETKVSKQEAEKRGITLKIADAQQKQENQIKAVRSFIAQGV
DAIFIAPVVATGWTPVLQEAKEAKIPVFLLDRMIEVNDPSLYTAAVASDSVHEGKVAGEWLVKEVAGKPCNVVELQGTVG
SSVAINRKKGFADGIATAANVKIIRSQSGDFTRSKGKEVMESFIKAEQNGKNICAVYAHNDDMAIGAIQAIKEAGLKPGS
QIKIVSIDGVPDIFKAMMNGEANATVELTPNMAGPAFDALLAMKKDGTQPPKFIQTESKLLQPDTAKQEFELKKSMGY
>Mature_318_residues
MIKRLLLAAAITGALISTVQAAPLVVGFSQIGSESGWRSAETKVSKQEAEKRGITLKIADAQQKQENQIKAVRSFIAQGV
DAIFIAPVVATGWTPVLQEAKEAKIPVFLLDRMIEVNDPSLYTAAVASDSVHEGKVAGEWLVKEVAGKPCNVVELQGTVG
SSVAINRKKGFADGIATAANVKIIRSQSGDFTRSKGKEVMESFIKAEQNGKNICAVYAHNDDMAIGAIQAIKEAGLKPGS
QIKIVSIDGVPDIFKAMMNGEANATVELTPNMAGPAFDALLAMKKDGTQPPKFIQTESKLLQPDTAKQEFELKKSMGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790674, Length=318, Percent_Identity=76.4150943396226, Blast_Score=490, Evalue=1e-140,
Organism=Escherichia coli, GI1790192, Length=230, Percent_Identity=33.9130434782609, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1790526, Length=231, Percent_Identity=24.6753246753247, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789068, Length=206, Percent_Identity=27.6699029126214, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 33928; Mature: 33928

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRLLLAAAITGALISTVQAAPLVVGFSQIGSESGWRSAETKVSKQEAEKRGITLKIAD
CHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECC
AQQKQENQIKAVRSFIAQGVDAIFIAPVVATGWTPVLQEAKEAKIPVFLLDRMIEVNDPS
CHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCCC
LYTAAVASDSVHEGKVAGEWLVKEVAGKPCNVVELQGTVGSSVAINRKKGFADGIATAAN
EEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCHHHHHHHHC
VKIIRSQSGDFTRSKGKEVMESFIKAEQNGKNICAVYAHNDDMAIGAIQAIKEAGLKPGS
EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCC
QIKIVSIDGVPDIFKAMMNGEANATVELTPNMAGPAFDALLAMKKDGTQPPKFIQTESKL
EEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHCHHHH
LQPDTAKQEFELKKSMGY
CCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MIKRLLLAAAITGALISTVQAAPLVVGFSQIGSESGWRSAETKVSKQEAEKRGITLKIAD
CHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECC
AQQKQENQIKAVRSFIAQGVDAIFIAPVVATGWTPVLQEAKEAKIPVFLLDRMIEVNDPS
CHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCCC
LYTAAVASDSVHEGKVAGEWLVKEVAGKPCNVVELQGTVGSSVAINRKKGFADGIATAAN
EEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCHHHHHHHHC
VKIIRSQSGDFTRSKGKEVMESFIKAEQNGKNICAVYAHNDDMAIGAIQAIKEAGLKPGS
EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCC
QIKIVSIDGVPDIFKAMMNGEANATVELTPNMAGPAFDALLAMKKDGTQPPKFIQTESKL
EEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHCHHHH
LQPDTAKQEFELKKSMGY
CCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 9298646 [H]