Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is murI
Identifier: 157373001
GI number: 157373001
Start: 5282532
End: 5283395
Strand: Reverse
Name: murI
Synonym: Spro_4769
Alternate gene names: 157373001
Gene position: 5283395-5282532 (Counterclockwise)
Preceding gene: 157373002
Following gene: 157373000
Centisome position: 96.96
GC content: 53.36
Gene sequence:
>864_bases ATGGCTACGCTACTCCAGGAAGAGAATACTACCTCACTGGAAGCTATACCTTCTAACACCACCGCGAAGACCCGTCCGAC GGTACTGGTATTTGATTCCGGCGTCGGCGGGTTATCGGTGTATCAAGAGGTTCGGCAACTGTTGCCGGACCTGCACTATA TATACGCTTTCGATAATGTGGCGTTTCCCTACGGTGAGAAATCCGAAGAGTTTATTGTTGAACGCGTGCTGGAGATTGTC AGCGCGGTGCAGCAGCGCCATCCTCTGGCGATAGTCATCATCGCTTGTAACACCGCCAGTACCGTATCCTTACCGGCCTT ACGTGAACGCTTTACCTTCCCGGTCGTTGGTGTGGTACCTGCCATCAAACCTGCCGCCCGTCTGACCGCCAATGGCGTTG TCGGCCTGCTGGCTACCCGTGGTACCGTACAGCGCACCTATACTCATGAGTTGATTGCCCGCTTCGCCACCGATTGCAAA ATTGAGCTATTGGGGTCCTCAGAGCTGGTGGAACTGGCAGAAGCCAAGCTGCATGGCGAAGCTGTACCCTTGCCAACGCT GAAGAAAATCCTGCATCCATGGCTGAGCATGCGTGAGCCGCCGGATACCGTAGTTCTCGGTTGCACCCACTTCCCTTTAT TAGCAGAAGAGTTAATGCAGGTGTTGCCTGAGGGAACCCGGCTGATCGATTCCGGCGCGGCAATCGCCCGTCGTACCGCC TGGTTGATCTCGACACAGGAAAATCTGGTGTCTACGCAGGAAGATAATCTGGCGTATTGCATGGCGTTAAATGAAGACAC TGACGCTTTATTGCCCGTTCTGCAGGGATATGGCTTTAAATCGTTGAAAAAACTGCCTGTTTAA
Upstream 100 bases:
>100_bases GTCAGCCTGTGGGATCTCGCAGTTTCGTATCCGGTCACATCTCATCTGACAGTTCGTGGTAGAATCGCCAACCTGTTTGA TAAAGATTATGAGACGGCTT
Downstream 100 bases:
>100_bases GAGCGTTTTGGTTAAACATTCAACGGTCGGAAAAAATATTGAAATTAGGGGTTGCGGCGTTCTGAGAACTCCCTATAATG CGCCTCCACTGACCGGGAAC
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MATLLQEENTTSLEAIPSNTTAKTRPTVLVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNVAFPYGEKSEEFIVERVLEIV SAVQQRHPLAIVIIACNTASTVSLPALRERFTFPVVGVVPAIKPAARLTANGVVGLLATRGTVQRTYTHELIARFATDCK IELLGSSELVELAEAKLHGEAVPLPTLKKILHPWLSMREPPDTVVLGCTHFPLLAEELMQVLPEGTRLIDSGAAIARRTA WLISTQENLVSTQEDNLAYCMALNEDTDALLPVLQGYGFKSLKKLPV
Sequences:
>Translated_287_residues MATLLQEENTTSLEAIPSNTTAKTRPTVLVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNVAFPYGEKSEEFIVERVLEIV SAVQQRHPLAIVIIACNTASTVSLPALRERFTFPVVGVVPAIKPAARLTANGVVGLLATRGTVQRTYTHELIARFATDCK IELLGSSELVELAEAKLHGEAVPLPTLKKILHPWLSMREPPDTVVLGCTHFPLLAEELMQVLPEGTRLIDSGAAIARRTA WLISTQENLVSTQEDNLAYCMALNEDTDALLPVLQGYGFKSLKKLPV >Mature_286_residues ATLLQEENTTSLEAIPSNTTAKTRPTVLVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNVAFPYGEKSEEFIVERVLEIVS AVQQRHPLAIVIIACNTASTVSLPALRERFTFPVVGVVPAIKPAARLTANGVVGLLATRGTVQRTYTHELIARFATDCKI ELLGSSELVELAEAKLHGEAVPLPTLKKILHPWLSMREPPDTVVLGCTHFPLLAEELMQVLPEGTRLIDSGAAIARRTAW LISTQENLVSTQEDNLAYCMALNEDTDALLPVLQGYGFKSLKKLPV
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family
Homologues:
Organism=Escherichia coli, GI87082355, Length=287, Percent_Identity=73.8675958188153, Blast_Score=421, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURI_SERP5 (A8GL72)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001480990.1 - ProteinModelPortal: A8GL72 - SMR: A8GL72 - STRING: A8GL72 - GeneID: 5602457 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_4769 - eggNOG: COG0796 - HOGENOM: HBG645102 - OMA: CGHIPYG - ProtClustDB: PRK00865 - BioCyc: SPRO399741:SPRO_4769-MONOMER - HAMAP: MF_00258 - InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 - Gene3D: G3DSA:3.40.50.1860 - TIGRFAMs: TIGR00067
Pfam domain/function: PF01177 Asp_Glu_race; SSF53681 Asp/Glu_race
EC number: =5.1.1.3
Molecular weight: Translated: 31400; Mature: 31269
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS00923 ASP_GLU_RACEMASE_1; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLLQEENTTSLEAIPSNTTAKTRPTVLVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNV CCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCHHEEEEEECCE AFPYGEKSEEFIVERVLEIVSAVQQRHPLAIVIIACNTASTVSLPALRERFTFPVVGVVP ECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHCCCCHHHHHH AIKPAARLTANGVVGLLATRGTVQRTYTHELIARFATDCKIELLGSSELVELAEAKLHGE CCCHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCC AVPLPTLKKILHPWLSMREPPDTVVLGCTHFPLLAEELMQVLPEGTRLIDSGAAIARRTA CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEHHCCHHHHHHHH WLISTQENLVSTQEDNLAYCMALNEDTDALLPVLQGYGFKSLKKLPV HEEECHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHCCCC >Mature Secondary Structure ATLLQEENTTSLEAIPSNTTAKTRPTVLVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNV CCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCHHEEEEEECCE AFPYGEKSEEFIVERVLEIVSAVQQRHPLAIVIIACNTASTVSLPALRERFTFPVVGVVP ECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHCCCCHHHHHH AIKPAARLTANGVVGLLATRGTVQRTYTHELIARFATDCKIELLGSSELVELAEAKLHGE CCCHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCC AVPLPTLKKILHPWLSMREPPDTVVLGCTHFPLLAEELMQVLPEGTRLIDSGAAIARRTA CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEHHCCHHHHHHHH WLISTQENLVSTQEDNLAYCMALNEDTDALLPVLQGYGFKSLKKLPV HEEECHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA