| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is luxQ [H]
Identifier: 157372967
GI number: 157372967
Start: 5231229
End: 5233013
Strand: Direct
Name: luxQ [H]
Synonym: Spro_4735
Alternate gene names: 157372967
Gene position: 5231229-5233013 (Clockwise)
Preceding gene: 157372966
Following gene: 157372972
Centisome position: 96.01
GC content: 54.17
Gene sequence:
>1785_bases ATGAAGCTCACAGGGTTTAAAAGCAACAGCAGGCTGGCGATCCCGGCTATTTTTGCCGCACTGTTTTTGGTTGCCTCTAC GGTGACGCTGTATTACTACAGCGCAACCCTGTCAAAGAAGGGGCTGTATGCTATCGCCGGCACCCAGGAGAATTACTCCT GGTCGATCGCCAAGTTCTCCATCAAGCTGGCCGAGTTTGATACGCTGGTCGAACAGCTGAAAAATGCGCCGCAGGTGGAC GCCGAGGCTCTGCGGCTTAAATTTGAAATCCTTTACTCTCGCTTTTACGTGCTGGAAACGGTGTCCGAATCCACCCAGCC ACTGTACGCCGAACCGGGTTATCCCGAGGTGGTCACGCACATGCGCGAGAAAATGGATCAGATTGATCATTTGCTCAACA GCCCGAAGATTGATTTCTCGTTGATTTCGCAGGCCATGAGGCAGATTAAGCCCTATGCGATTGAGATGGCCAACCTGACC GATCACGCTGAAGTGAAGCAGCGCACCGCCGCCTACGAAGACTATATCGAAAAACGACACATCATTTTTTATGGTCTGGT GATCGTGATGTTCTCGGTGATCGCGCTGATCGCCATCACCCTGATTGTGCTGCGCCAGCAGCGCCTGACAATCCGGCAGC AGGCCAAAGCGATTGAGGCAGAGAAAGCCACTCGCACCAAAAACGCCTTCCTGGGGGCCATTGGTCACGAACTGCGCACC TCGCTGCAAAGTATTATGTCTGCCATTGATGTGCTGGTGAATACCAAGGTGTCGGCCGAACATGCGGACACCTTCCAACG TCTGGAAACTGCCGCGCAGCAAATTGAAAGCCAGATGAAAGATCTGACCGATTACGCGCACCTGGACAGCGGAATGATGG AGCTGCGCATCGCCCCCTTCGACGTTCAGCGGCTGGTCGAGGAAACCGCAAATGAAATCAATACGCTGAGTCAGAAAGAT CAGGTGACGCTGTTGTGTGAAGTGGAGTGCGGTCATCTGCAGATACATTCCGATCCACTGCGCATCAGGCAAATTATCGT CAACCTGCTGACCAACGCGTTCAAATATACCGAAAGCGGCACCATCACGCTGTATAGCAGCCTGCGGCGCCAGCCAAACG GCAATGCATTGATTATTGAGGTCACGGATACCGGTATCGGTATCGAAAAGGAGATGCTCGACCAGATATTCCAGCCCTTC ACCCAGCTCGATCAGTCGCATACCCGGCAGTATGGCGGCGTCGGCATGGGGCTGGCGATTGTACACGGACTGGTCACGCT GCTCGACGGCAGCATTACCGTCTACAGTGAGCCCAAAAAAGGCAGCACCTTCATCGTCAGTATTCCGGTTGAAGTCAGCA ACGAAGAACGGCTCGACGAAATACCTCACCACCACCATAGCCTGCTGCAAAAACAGCAGCATATTTTGGTGGTTGATGAC AACAAATCGGTGAGTGACGCCTTCGCGGCGCTGCTGGACAAGCTCGGCTATCAACATGAACTGTGCAATTCGTCGGAACG GGCGCTGCAAAAGCTGCTCCGTCGCCCTTATGACGCATTACTGCTGGATCTGCAAATGCCCGGCATTGACGGTGCCGCGC TGGCTAAACAATTACGCAGCCAACGTGGCCCCAACCGTGGTATTCCGATCGTGGGCATTAGCGCTTACACCCCGGAACAA CTGTCTGCCGAACAGCGGGCGCTGTTCGACAATTACCTGATGAAGCCGGTCAGGCTGGACGCGTTGTCTTCCGCACTGGC TTCACTGCTGGCCGCTAGAGATTAA
Upstream 100 bases:
>100_bases CGCTGTTTTTGGTTTATCCCAGGGATGCCGCAGGGCCTGAGTTGAATTCCCCGCTCTACAACTCACGCTTTATCTGGCAA GTGGACAGGATTGTGATCAA
Downstream 100 bases:
>100_bases AACAGCGCAACAGTGCGGCTTCAATCACATGGAGCCGTACTGGCTTTTCATAAGGGCCCAGTACGTCATAGTCGCGCATC GCCCTGGCGATTTCAGATTC
Product: integral membrane sensor hybrid histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 594; Mature: 594
Protein sequence:
>594_residues MKLTGFKSNSRLAIPAIFAALFLVASTVTLYYYSATLSKKGLYAIAGTQENYSWSIAKFSIKLAEFDTLVEQLKNAPQVD AEALRLKFEILYSRFYVLETVSESTQPLYAEPGYPEVVTHMREKMDQIDHLLNSPKIDFSLISQAMRQIKPYAIEMANLT DHAEVKQRTAAYEDYIEKRHIIFYGLVIVMFSVIALIAITLIVLRQQRLTIRQQAKAIEAEKATRTKNAFLGAIGHELRT SLQSIMSAIDVLVNTKVSAEHADTFQRLETAAQQIESQMKDLTDYAHLDSGMMELRIAPFDVQRLVEETANEINTLSQKD QVTLLCEVECGHLQIHSDPLRIRQIIVNLLTNAFKYTESGTITLYSSLRRQPNGNALIIEVTDTGIGIEKEMLDQIFQPF TQLDQSHTRQYGGVGMGLAIVHGLVTLLDGSITVYSEPKKGSTFIVSIPVEVSNEERLDEIPHHHHSLLQKQQHILVVDD NKSVSDAFAALLDKLGYQHELCNSSERALQKLLRRPYDALLLDLQMPGIDGAALAKQLRSQRGPNRGIPIVGISAYTPEQ LSAEQRALFDNYLMKPVRLDALSSALASLLAARD
Sequences:
>Translated_594_residues MKLTGFKSNSRLAIPAIFAALFLVASTVTLYYYSATLSKKGLYAIAGTQENYSWSIAKFSIKLAEFDTLVEQLKNAPQVD AEALRLKFEILYSRFYVLETVSESTQPLYAEPGYPEVVTHMREKMDQIDHLLNSPKIDFSLISQAMRQIKPYAIEMANLT DHAEVKQRTAAYEDYIEKRHIIFYGLVIVMFSVIALIAITLIVLRQQRLTIRQQAKAIEAEKATRTKNAFLGAIGHELRT SLQSIMSAIDVLVNTKVSAEHADTFQRLETAAQQIESQMKDLTDYAHLDSGMMELRIAPFDVQRLVEETANEINTLSQKD QVTLLCEVECGHLQIHSDPLRIRQIIVNLLTNAFKYTESGTITLYSSLRRQPNGNALIIEVTDTGIGIEKEMLDQIFQPF TQLDQSHTRQYGGVGMGLAIVHGLVTLLDGSITVYSEPKKGSTFIVSIPVEVSNEERLDEIPHHHHSLLQKQQHILVVDD NKSVSDAFAALLDKLGYQHELCNSSERALQKLLRRPYDALLLDLQMPGIDGAALAKQLRSQRGPNRGIPIVGISAYTPEQ LSAEQRALFDNYLMKPVRLDALSSALASLLAARD >Mature_594_residues MKLTGFKSNSRLAIPAIFAALFLVASTVTLYYYSATLSKKGLYAIAGTQENYSWSIAKFSIKLAEFDTLVEQLKNAPQVD AEALRLKFEILYSRFYVLETVSESTQPLYAEPGYPEVVTHMREKMDQIDHLLNSPKIDFSLISQAMRQIKPYAIEMANLT DHAEVKQRTAAYEDYIEKRHIIFYGLVIVMFSVIALIAITLIVLRQQRLTIRQQAKAIEAEKATRTKNAFLGAIGHELRT SLQSIMSAIDVLVNTKVSAEHADTFQRLETAAQQIESQMKDLTDYAHLDSGMMELRIAPFDVQRLVEETANEINTLSQKD QVTLLCEVECGHLQIHSDPLRIRQIIVNLLTNAFKYTESGTITLYSSLRRQPNGNALIIEVTDTGIGIEKEMLDQIFQPF TQLDQSHTRQYGGVGMGLAIVHGLVTLLDGSITVYSEPKKGSTFIVSIPVEVSNEERLDEIPHHHHSLLQKQQHILVVDD NKSVSDAFAALLDKLGYQHELCNSSERALQKLLRRPYDALLLDLQMPGIDGAALAKQLRSQRGPNRGIPIVGISAYTPEQ LSAEQRALFDNYLMKPVRLDALSSALASLLAARD
Specific function: At low cell density, in absence of autoinducer has a kinase activity, and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is transferred to
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI87081816, Length=393, Percent_Identity=29.5165394402036, Blast_Score=163, Evalue=3e-41, Organism=Escherichia coli, GI1788713, Length=449, Percent_Identity=28.7305122494432, Blast_Score=162, Evalue=5e-41, Organism=Escherichia coli, GI48994928, Length=378, Percent_Identity=29.3650793650794, Blast_Score=151, Evalue=1e-37, Organism=Escherichia coli, GI145693157, Length=262, Percent_Identity=34.3511450381679, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1789149, Length=236, Percent_Identity=31.7796610169492, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI1787894, Length=242, Percent_Identity=30.1652892561983, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1786600, Length=225, Percent_Identity=28.8888888888889, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI1790436, Length=296, Percent_Identity=25, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI1786783, Length=261, Percent_Identity=28.3524904214559, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1790346, Length=230, Percent_Identity=23.9130434782609, Blast_Score=76, Evalue=8e-15, Organism=Escherichia coli, GI1788393, Length=231, Percent_Identity=25.1082251082251, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1786912, Length=295, Percent_Identity=26.4406779661017, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI87082128, Length=231, Percent_Identity=25.1082251082251, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI1788549, Length=245, Percent_Identity=23.6734693877551, Blast_Score=63, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=85, Percent_Identity=37.6470588235294, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 66563; Mature: 66563
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTGFKSNSRLAIPAIFAALFLVASTVTLYYYSATLSKKGLYAIAGTQENYSWSIAKFS CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEE IKLAEFDTLVEQLKNAPQVDAEALRLKFEILYSRFYVLETVSESTQPLYAEPGYPEVVTH EHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH MREKMDQIDHLLNSPKIDFSLISQAMRQIKPYAIEMANLTDHAEVKQRTAAYEDYIEKRH HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHHHHHHHHHHH IIFYGLVIVMFSVIALIAITLIVLRQQRLTIRQQAKAIEAEKATRTKNAFLGAIGHELRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLQSIMSAIDVLVNTKVSAEHADTFQRLETAAQQIESQMKDLTDYAHLDSGMMELRIAPF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCH DVQRLVEETANEINTLSQKDQVTLLCEVECGHLQIHSDPLRIRQIIVNLLTNAFKYTESG HHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHCCCCC TITLYSSLRRQPNGNALIIEVTDTGIGIEKEMLDQIFQPFTQLDQSHTRQYGGVGMGLAI CEEEEHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VHGLVTLLDGSITVYSEPKKGSTFIVSIPVEVSNEERLDEIPHHHHSLLQKQQHILVVDD HHHHHHHHCCCEEEEECCCCCCEEEEEEEEECCCCHHHHHCCHHHHHHHHCCCCEEEEEC NKSVSDAFAALLDKLGYQHELCNSSERALQKLLRRPYDALLLDLQMPGIDGAALAKQLRS CCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCCHHHEEEEEECCCCCHHHHHHHHHH QRGPNRGIPIVGISAYTPEQLSAEQRALFDNYLMKPVRLDALSSALASLLAARD HCCCCCCCCEEEECCCCCHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLTGFKSNSRLAIPAIFAALFLVASTVTLYYYSATLSKKGLYAIAGTQENYSWSIAKFS CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEE IKLAEFDTLVEQLKNAPQVDAEALRLKFEILYSRFYVLETVSESTQPLYAEPGYPEVVTH EHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH MREKMDQIDHLLNSPKIDFSLISQAMRQIKPYAIEMANLTDHAEVKQRTAAYEDYIEKRH HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHHHHHHHHHHH IIFYGLVIVMFSVIALIAITLIVLRQQRLTIRQQAKAIEAEKATRTKNAFLGAIGHELRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLQSIMSAIDVLVNTKVSAEHADTFQRLETAAQQIESQMKDLTDYAHLDSGMMELRIAPF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCH DVQRLVEETANEINTLSQKDQVTLLCEVECGHLQIHSDPLRIRQIIVNLLTNAFKYTESG HHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHCCCCC TITLYSSLRRQPNGNALIIEVTDTGIGIEKEMLDQIFQPFTQLDQSHTRQYGGVGMGLAI CEEEEHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VHGLVTLLDGSITVYSEPKKGSTFIVSIPVEVSNEERLDEIPHHHHSLLQKQQHILVVDD HHHHHHHHCCCEEEEECCCCCCEEEEEEEEECCCCHHHHHCCHHHHHHHHCCCCEEEEEC NKSVSDAFAALLDKLGYQHELCNSSERALQKLLRRPYDALLLDLQMPGIDGAALAKQLRS CCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCCHHHEEEEEECCCCCHHHHHHHHHH QRGPNRGIPIVGISAYTPEQLSAEQRALFDNYLMKPVRLDALSSALASLLAARD HCCCCCCCCEEEECCCCCHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]