| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372972
Identifier: 157372972
GI number: 157372972
Start: 5241914
End: 5243143
Strand: Direct
Name: 157372972
Synonym: Spro_4740
Alternate gene names: NA
Gene position: 5241914-5243143 (Clockwise)
Preceding gene: 157372967
Following gene: 157372974
Centisome position: 96.2
GC content: 54.15
Gene sequence:
>1230_bases ATGTTTAATACTTCAACTTTTGTCTACATTGCTACCACAGCAGATACCAAAGGACAAGAGTTGGAGTATGTCCGCCAGAT TATCGCCAACCTCGGTTTGCCCACGGTTACCGTCGATCTCTCGACCAGCAGCCTGCCGGCGAACCCGGCAGCCGATATCT GCGCTGAGGAAGTTGCCGGCTACCATCCCGAAGGGGCTAGGGCCGTATTTTGCCCCAACCGCAGCCATGCCATTACCGCG ATGGCACTCGCCTTCGAACGTTTTCTCCTGACACGCCACGATATCGCGGCCCTGCTTGGTTTGGGCGGCTCTGGCGGCAC AGCTATTATCACTCCGGCGATGCAAAAATTACCCATCGGCCTGCCTAAATTGATGGTTTCAAGCATGGCTGCAGGCGACG TCTCGGTGTATGTCGGCAACAGCGACATCGCCATGCTGTATTCCGTCACGGATATAGCAGGCCTGAACCGTATATCGCGC CGTGTCCTGAGCAATGCAGCATGCCAGATTGCTGGAGCGGTACGTTTCGCCACCGCCCATGACATCGAGGAAAAACCGGC TGTCGGTCTGACGATGTTTGGCGTCACAACGCCTTGCATAAAAATGGTTGTTTCCGCGCTCGAACCTCAATGGGACTGCT TGGTATTCCACGCCACCGGCAGTGGAGGCAGAGCGTTGGAGAAACTGATCGATAGCCGTTTGCTGAGCGCAGCGCTGGAT CTGACCACAACCGAAGTGGCCGATTATCTGTTCGGAGGGGTTCTTCCCTGCAATGAGGAGCGCTTTAGTGCCATCGCCCG CACCGGCATCCCCTGCATACTATCCTGTGGTGCATTGGATATGATTAATTTTGGCCCCCCAGAAACGGTACCGGCGCGTT ATGCCGAACGCCTGATCCACCAACATAACCCTCAGGTTACTTTGGTTCGCACTACACCGCAGGAAAATGCCAGTATCGGA CGCTGGATAGGGGAAAAAATGAATGCTTGCAGCGGTGAGGTACGATTTGTGATCCCGGGAGGGGGGGTATCCGCACTGGA TGCTCCGGGACAGCCTTTTTGGGATCCGCAGGCATTGGCCGCTTTTATGCAGGCGTTAGAAAGTACGCTTCGGCCAACTA ACAAACGACGGCTGATAAAAACGGCTTATCATATTAACGATCCACGTTTTGCACATATTGTTACCGAACAGTTTCAACAT ATTGCCAACCCTCGCCTCTTATCGAAGTGA
Upstream 100 bases:
>100_bases ATTAATCATTTTAACTTAAACGACCAACACCAGGGTCCTACATAATTATTTAACACTATAATATTAAAATATAAAATTAG AAATTCGGCAGGAAAGAGCA
Downstream 100 bases:
>100_bases CTTGTTTTTGGTCAGAAAAAGCAAAAGGGCCAGAGATTAATCTGGCCCTTTTTATATTCACCACATGAATTTATTACTGT GAATTCGTCATTTTCGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MFNTSTFVYIATTADTKGQELEYVRQIIANLGLPTVTVDLSTSSLPANPAADICAEEVAGYHPEGARAVFCPNRSHAITA MALAFERFLLTRHDIAALLGLGGSGGTAIITPAMQKLPIGLPKLMVSSMAAGDVSVYVGNSDIAMLYSVTDIAGLNRISR RVLSNAACQIAGAVRFATAHDIEEKPAVGLTMFGVTTPCIKMVVSALEPQWDCLVFHATGSGGRALEKLIDSRLLSAALD LTTTEVADYLFGGVLPCNEERFSAIARTGIPCILSCGALDMINFGPPETVPARYAERLIHQHNPQVTLVRTTPQENASIG RWIGEKMNACSGEVRFVIPGGGVSALDAPGQPFWDPQALAAFMQALESTLRPTNKRRLIKTAYHINDPRFAHIVTEQFQH IANPRLLSK
Sequences:
>Translated_409_residues MFNTSTFVYIATTADTKGQELEYVRQIIANLGLPTVTVDLSTSSLPANPAADICAEEVAGYHPEGARAVFCPNRSHAITA MALAFERFLLTRHDIAALLGLGGSGGTAIITPAMQKLPIGLPKLMVSSMAAGDVSVYVGNSDIAMLYSVTDIAGLNRISR RVLSNAACQIAGAVRFATAHDIEEKPAVGLTMFGVTTPCIKMVVSALEPQWDCLVFHATGSGGRALEKLIDSRLLSAALD LTTTEVADYLFGGVLPCNEERFSAIARTGIPCILSCGALDMINFGPPETVPARYAERLIHQHNPQVTLVRTTPQENASIG RWIGEKMNACSGEVRFVIPGGGVSALDAPGQPFWDPQALAAFMQALESTLRPTNKRRLIKTAYHINDPRFAHIVTEQFQH IANPRLLSK >Mature_409_residues MFNTSTFVYIATTADTKGQELEYVRQIIANLGLPTVTVDLSTSSLPANPAADICAEEVAGYHPEGARAVFCPNRSHAITA MALAFERFLLTRHDIAALLGLGGSGGTAIITPAMQKLPIGLPKLMVSSMAAGDVSVYVGNSDIAMLYSVTDIAGLNRISR RVLSNAACQIAGAVRFATAHDIEEKPAVGLTMFGVTTPCIKMVVSALEPQWDCLVFHATGSGGRALEKLIDSRLLSAALD LTTTEVADYLFGGVLPCNEERFSAIARTGIPCILSCGALDMINFGPPETVPARYAERLIHQHNPQVTLVRTTPQENASIG RWIGEKMNACSGEVRFVIPGGGVSALDAPGQPFWDPQALAAFMQALESTLRPTNKRRLIKTAYHINDPRFAHIVTEQFQH IANPRLLSK
Specific function: Unknown
COG id: COG5441
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0261 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4740_SERP5 (A8GL43)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001480961.1 - GeneID: 5603876 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_4740 - eggNOG: COG5441 - HOGENOM: HBG373911 - OMA: PKVMVST - ProtClustDB: PRK02399 - BioCyc: SPRO399741:SPRO_4740-MONOMER - HAMAP: MF_00677 - InterPro: IPR008322 - PIRSF: PIRSF033271
Pfam domain/function: PF06792 UPF0261
EC number: NA
Molecular weight: Translated: 43858; Mature: 43858
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNTSTFVYIATTADTKGQELEYVRQIIANLGLPTVTVDLSTSSLPANPAADICAEEVAG CCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCC YHPEGARAVFCPNRSHAITAMALAFERFLLTRHDIAALLGLGGSGGTAIITPAMQKLPIG CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHCCCC LPKLMVSSMAAGDVSVYVGNSDIAMLYSVTDIAGLNRISRRVLSNAACQIAGAVRFATAH CHHHHHHHHCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHH DIEEKPAVGLTMFGVTTPCIKMVVSALEPQWDCLVFHATGSGGRALEKLIDSRLLSAALD CCCCCCCCCEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH LTTTEVADYLFGGVLPCNEERFSAIARTGIPCILSCGALDMINFGPPETVPARYAERLIH HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHH QHNPQVTLVRTTPQENASIGRWIGEKMNACSGEVRFVIPGGGVSALDAPGQPFWDPQALA CCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHH AFMQALESTLRPTNKRRLIKTAYHINDPRFAHIVTEQFQHIANPRLLSK HHHHHHHHHHCCCCHHHHHHHHEECCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFNTSTFVYIATTADTKGQELEYVRQIIANLGLPTVTVDLSTSSLPANPAADICAEEVAG CCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCC YHPEGARAVFCPNRSHAITAMALAFERFLLTRHDIAALLGLGGSGGTAIITPAMQKLPIG CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHCCCC LPKLMVSSMAAGDVSVYVGNSDIAMLYSVTDIAGLNRISRRVLSNAACQIAGAVRFATAH CHHHHHHHHCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHH DIEEKPAVGLTMFGVTTPCIKMVVSALEPQWDCLVFHATGSGGRALEKLIDSRLLSAALD CCCCCCCCCEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH LTTTEVADYLFGGVLPCNEERFSAIARTGIPCILSCGALDMINFGPPETVPARYAERLIH HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHH QHNPQVTLVRTTPQENASIGRWIGEKMNACSGEVRFVIPGGGVSALDAPGQPFWDPQALA CCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHH AFMQALESTLRPTNKRRLIKTAYHINDPRFAHIVTEQFQHIANPRLLSK HHHHHHHHHHCCCCHHHHHHHHEECCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA