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The map label for this gene is yjjN [H]

Identifier: 157372938

GI number: 157372938

Start: 5200888

End: 5201913

Strand: Reverse

Name: yjjN [H]

Synonym: Spro_4706

Alternate gene names: 157372938

Gene position: 5201913-5200888 (Counterclockwise)

Preceding gene: 157372939

Following gene: 157372937

Centisome position: 95.47

GC content: 54.58

Gene sequence:

>1026_bases
ATGGCTTCTGAAATGAAGGTATTAGTGTGCATCAAACCGGGCCAACTGAGCCAACAGCGGCGGCCAATACCGCTGCCGGG
GACTGGAGAAGTCCTGCTGAAAATGTGCGCTTTGGGAGTCTGCGGTTCGGATATTCACGCTTTCCACGGACGCCAACCGA
TGATGCAGTACCCGGCGGTGTTGGGGCATGAAATCAACGCCGAAGTGGTGGCCTGCGGGCAAGATGCCGCGCTGTATCAA
CCCGGTCAACAGGTGGTGGTGATCCCCTATCGTCATTGTGGGCGGTGTGCGGCCTGTCGGCGTGGACGCACCACTTGCTG
CACTGCTTTGTCGGTAATGGGAATTCATCGAACCGGAGCGATGCAGGAATATGTGACGGTGGCTGAAGATGCTCTGCTGG
CGGTCACGGGGATCCCTCATCTTCAGGCAGCGTTAATTGAGCCTTATGCCATTGCTGCCCATGCGGTACGGCGCAGTGGG
GTGACCCACGGAGTGAGCCTGTTGGTGGTGGGGGCGGGAGCTATCGGATTAGGCATTGCGGATATCGGGCGTAGCCTGGG
GGCCGAAGTGATAGTGGCAGAAGCCGATCCGCAGCGTCAGGCATTTGCTGGCGAGCAATATGGTTTTACCGACGTATTGA
ACCCATTAGATACCGATTTTGAGCAACAATTGCGGGTGTTGACCCACAGCGATGGCCCACAGGTGATTATTGATGCGACG
GGTAACCCGGCTTCCATGAACAGTCAGGTAGAACGGATCGCCGCAGGCGGGACGTTGGTGTTTGTCGGCCTGCATACCGG
TGAAGTGAGCTTCAATGACCTGGCTTTCCATAAAAGGGAATTGGAACTGCTCGGTAGCCGTGCAGCGGATCGCGAAGACT
TCATCAAGGTAATCACTTTACTGCAGCAGGGAAAAATCAGCCCGGAAAAACTGTGCACCCGGGAAATACTTTTCTCTGAA
TTAGATCAATATCAATTTGAACAACTCAATCAGCCAGGCAATGTGAAGTCGGTCATTCTATTTTAA

Upstream 100 bases:

>100_bases
CCGCGTGAAGAACTGGGTGCCATGGTGTGGTTTTTGGTCAGTGAGGCCTCGCGTTACATCACCGGGCAGGATTTTGCCGT
GGACGGGGGGGCGCTGAGCT

Downstream 100 bases:

>100_bases
GCATCCGCAGTCGGTTACCTGAATAATTGAACTGGAGATTATTATTATGAAAGGACAACTTAAGCGCTGGGTCATATTGA
CCTGCGCATTATTTTCTTTA

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MASEMKVLVCIKPGQLSQQRRPIPLPGTGEVLLKMCALGVCGSDIHAFHGRQPMMQYPAVLGHEINAEVVACGQDAALYQ
PGQQVVVIPYRHCGRCAACRRGRTTCCTALSVMGIHRTGAMQEYVTVAEDALLAVTGIPHLQAALIEPYAIAAHAVRRSG
VTHGVSLLVVGAGAIGLGIADIGRSLGAEVIVAEADPQRQAFAGEQYGFTDVLNPLDTDFEQQLRVLTHSDGPQVIIDAT
GNPASMNSQVERIAAGGTLVFVGLHTGEVSFNDLAFHKRELELLGSRAADREDFIKVITLLQQGKISPEKLCTREILFSE
LDQYQFEQLNQPGNVKSVILF

Sequences:

>Translated_341_residues
MASEMKVLVCIKPGQLSQQRRPIPLPGTGEVLLKMCALGVCGSDIHAFHGRQPMMQYPAVLGHEINAEVVACGQDAALYQ
PGQQVVVIPYRHCGRCAACRRGRTTCCTALSVMGIHRTGAMQEYVTVAEDALLAVTGIPHLQAALIEPYAIAAHAVRRSG
VTHGVSLLVVGAGAIGLGIADIGRSLGAEVIVAEADPQRQAFAGEQYGFTDVLNPLDTDFEQQLRVLTHSDGPQVIIDAT
GNPASMNSQVERIAAGGTLVFVGLHTGEVSFNDLAFHKRELELLGSRAADREDFIKVITLLQQGKISPEKLCTREILFSE
LDQYQFEQLNQPGNVKSVILF
>Mature_340_residues
ASEMKVLVCIKPGQLSQQRRPIPLPGTGEVLLKMCALGVCGSDIHAFHGRQPMMQYPAVLGHEINAEVVACGQDAALYQP
GQQVVVIPYRHCGRCAACRRGRTTCCTALSVMGIHRTGAMQEYVTVAEDALLAVTGIPHLQAALIEPYAIAAHAVRRSGV
THGVSLLVVGAGAIGLGIADIGRSLGAEVIVAEADPQRQAFAGEQYGFTDVLNPLDTDFEQQLRVLTHSDGPQVIIDATG
NPASMNSQVERIAAGGTLVFVGLHTGEVSFNDLAFHKRELELLGSRAADREDFIKVITLLQQGKISPEKLCTREILFSEL
DQYQFEQLNQPGNVKSVILF

Specific function: Putative L-galactonate oxidoreductase that is required for growth on L-galactonate as the sole carbon source [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI156627571, Length=286, Percent_Identity=31.4685314685315, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI4501929, Length=381, Percent_Identity=23.3595800524934, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI71743840, Length=385, Percent_Identity=24.1558441558442, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI262073058, Length=385, Percent_Identity=24.1558441558442, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI4501939, Length=263, Percent_Identity=23.574144486692, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI156523966, Length=263, Percent_Identity=23.574144486692, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI4501933, Length=381, Percent_Identity=23.3595800524934, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI34577061, Length=387, Percent_Identity=23.5142118863049, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI71565154, Length=378, Percent_Identity=22.2222222222222, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI226510992, Length=340, Percent_Identity=45.5882352941176, Blast_Score=289, Evalue=2e-79,
Organism=Escherichia coli, GI1787863, Length=320, Percent_Identity=32.1875, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1788073, Length=338, Percent_Identity=27.2189349112426, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1790718, Length=302, Percent_Identity=28.1456953642384, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1790045, Length=312, Percent_Identity=26.6025641025641, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI87082125, Length=350, Percent_Identity=28.8571428571429, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1788407, Length=305, Percent_Identity=25.9016393442623, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1788075, Length=339, Percent_Identity=23.8938053097345, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1786825, Length=373, Percent_Identity=26.2734584450402, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1786552, Length=363, Percent_Identity=26.1707988980716, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI87081918, Length=338, Percent_Identity=24.5562130177515, Blast_Score=73, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17562876, Length=338, Percent_Identity=28.1065088757396, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17562878, Length=196, Percent_Identity=30.1020408163265, Blast_Score=88, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17562582, Length=298, Percent_Identity=25.8389261744966, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71988145, Length=301, Percent_Identity=25.5813953488372, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17562584, Length=304, Percent_Identity=24.6710526315789, Blast_Score=75, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6322619, Length=347, Percent_Identity=25.6484149855908, Blast_Score=114, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6319955, Length=347, Percent_Identity=25.3602305475504, Blast_Score=111, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6323099, Length=343, Percent_Identity=25.3644314868805, Blast_Score=102, Evalue=9e-23,
Organism=Saccharomyces cerevisiae, GI6319258, Length=340, Percent_Identity=27.3529411764706, Blast_Score=92, Evalue=9e-20,
Organism=Saccharomyces cerevisiae, GI6320033, Length=365, Percent_Identity=24.3835616438356, Blast_Score=92, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6319257, Length=317, Percent_Identity=26.4984227129338, Blast_Score=89, Evalue=7e-19,
Organism=Saccharomyces cerevisiae, GI6323961, Length=316, Percent_Identity=25.3164556962025, Blast_Score=88, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6319621, Length=310, Percent_Identity=25.1612903225806, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6324486, Length=339, Percent_Identity=25.3687315634218, Blast_Score=81, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6323729, Length=313, Percent_Identity=24.6006389776358, Blast_Score=80, Evalue=5e-16,
Organism=Drosophila melanogaster, GI17737897, Length=335, Percent_Identity=28.3582089552239, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI17137530, Length=311, Percent_Identity=27.6527331189711, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI17737895, Length=383, Percent_Identity=23.4986945169713, Blast_Score=86, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR002328
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 36646; Mature: 36515

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASEMKVLVCIKPGQLSQQRRPIPLPGTGEVLLKMCALGVCGSDIHAFHGRQPMMQYPAV
CCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHH
LGHEINAEVVACGQDAALYQPGQQVVVIPYRHCGRCAACRRGRTTCCTALSVMGIHRTGA
HCCCCCCEEEEECCCCCEECCCCEEEEECCHHCCCHHHHHCCCHHHHHHHHHHHHHCCCH
MQEYVTVAEDALLAVTGIPHLQAALIEPYAIAAHAVRRSGVTHGVSLLVVGAGAIGLGIA
HHHHHHHHHHHEEEEECCCHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHH
DIGRSLGAEVIVAEADPQRQAFAGEQYGFTDVLNPLDTDFEQQLRVLTHSDGPQVIIDAT
HHHHHCCCEEEEECCCCCHHHHCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCEEEEECC
GNPASMNSQVERIAAGGTLVFVGLHTGEVSFNDLAFHKRELELLGSRAADREDFIKVITL
CCCCCHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LQQGKISPEKLCTREILFSELDQYQFEQLNQPGNVKSVILF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
>Mature Secondary Structure 
ASEMKVLVCIKPGQLSQQRRPIPLPGTGEVLLKMCALGVCGSDIHAFHGRQPMMQYPAV
CCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHH
LGHEINAEVVACGQDAALYQPGQQVVVIPYRHCGRCAACRRGRTTCCTALSVMGIHRTGA
HCCCCCCEEEEECCCCCEECCCCEEEEECCHHCCCHHHHHCCCHHHHHHHHHHHHHCCCH
MQEYVTVAEDALLAVTGIPHLQAALIEPYAIAAHAVRRSGVTHGVSLLVVGAGAIGLGIA
HHHHHHHHHHHEEEEECCCHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHH
DIGRSLGAEVIVAEADPQRQAFAGEQYGFTDVLNPLDTDFEQQLRVLTHSDGPQVIIDAT
HHHHHCCCEEEEECCCCCHHHHCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCEEEEECC
GNPASMNSQVERIAAGGTLVFVGLHTGEVSFNDLAFHKRELELLGSRAADREDFIKVITL
CCCCCHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LQQGKISPEKLCTREILFSELDQYQFEQLNQPGNVKSVILF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]