Click here to switch to the map view.

The map label for this gene is smfA [H]

Identifier: 157372904

GI number: 157372904

Start: 5162536

End: 5163087

Strand: Direct

Name: smfA [H]

Synonym: Spro_4672

Alternate gene names: 157372904

Gene position: 5162536-5163087 (Clockwise)

Preceding gene: 157372903

Following gene: 157372905

Centisome position: 94.75

GC content: 58.51

Gene sequence:

>552_bases
ATGACCAAGCGGATTTGGGGCGTAGTGCTTATCGCGCTCAGCGTTTGCAGCGCCGAAGCGACGGCAAAAAATCAGGGCCA
CGGCACGCTCAACCTGGGCGGCGAGATCGTCGAAACCCCCTGTGGGATTGCCAGCGAAAGCCTGGACCAGACCGTTGATT
TCGGGCTGATATCCATGACTGATGCCGCGTTGGATACGCAGCCGGTGCTGATTGGCAGTCGCCGCAACTTTGAAATCAAG
CTGGTGAATTGCGAATTAGCCAGCCAGGTAAAACCCGACTTTATCTACCGCGCAGCCACCGTCACCTTCGACGGCACGGC
TGACAGCCGGGATCCCGAGTTATTGGCCGTTTATGGCGAAGCGCAAGGCGTGGCCATTGAGCTGCTGACCGCTGCCGGTA
TCCCGATCCCGCTGGGTAGCACCACGGCGGATTATCAGATTGTCGCCGGCGACAATACGCTGCGCTTTAGCGCTCAGCTA
CGTATTCACCCTGACAGGGCCCGAGCCGGCGGATTCAGCTCTCTGGCGAAATTCACCCTGTCTTATCTGTAA

Upstream 100 bases:

>100_bases
GGCCTACCTGTAATCCCTCGCTGGGGATATCACTGCGGTATCCCCGCTTTACCTGCACGGATATTGGGTAACGGCACCAA
CGGCAACAGGGAGAGCCAGC

Downstream 100 bases:

>100_bases
CGCCTCGTTAGGCGGGTGCCTTCACAGGGCACTGAATGACATCACGTATTACGTATTCAGGTCGTACAGGATGACCTGCT
ATTGGGCGCGGATTTGCCAT

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTKRIWGVVLIALSVCSAEATAKNQGHGTLNLGGEIVETPCGIASESLDQTVDFGLISMTDAALDTQPVLIGSRRNFEIK
LVNCELASQVKPDFIYRAATVTFDGTADSRDPELLAVYGEAQGVAIELLTAAGIPIPLGSTTADYQIVAGDNTLRFSAQL
RIHPDRARAGGFSSLAKFTLSYL

Sequences:

>Translated_183_residues
MTKRIWGVVLIALSVCSAEATAKNQGHGTLNLGGEIVETPCGIASESLDQTVDFGLISMTDAALDTQPVLIGSRRNFEIK
LVNCELASQVKPDFIYRAATVTFDGTADSRDPELLAVYGEAQGVAIELLTAAGIPIPLGSTTADYQIVAGDNTLRFSAQL
RIHPDRARAGGFSSLAKFTLSYL
>Mature_182_residues
TKRIWGVVLIALSVCSAEATAKNQGHGTLNLGGEIVETPCGIASESLDQTVDFGLISMTDAALDTQPVLIGSRRNFEIKL
VNCELASQVKPDFIYRAATVTFDGTADSRDPELLAVYGEAQGVAIELLTAAGIPIPLGSTTADYQIVAGDNTLRFSAQLR
IHPDRARAGGFSSLAKFTLSYL

Specific function: Major structural component of mannose-resistant fimbriae of Serratia marcescens [H]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI87081805, Length=186, Percent_Identity=31.1827956989247, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1786938, Length=185, Percent_Identity=30.2702702702703, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19404; Mature: 19273

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRIWGVVLIALSVCSAEATAKNQGHGTLNLGGEIVETPCGIASESLDQTVDFGLISMT
CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEECCCCCCHHHHHHHHCCCEEEEE
DAALDTQPVLIGSRRNFEIKLVNCELASQVKPDFIYRAATVTFDGTADSRDPELLAVYGE
CCCCCCCEEEEECCCCEEEEEEEEEHHCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECC
AQGVAIELLTAAGIPIPLGSTTADYQIVAGDNTLRFSAQLRIHPDRARAGGFSSLAKFTL
CCCEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEEEEEECCCCCCCCCHHHHHHHHH
SYL
HCC
>Mature Secondary Structure 
TKRIWGVVLIALSVCSAEATAKNQGHGTLNLGGEIVETPCGIASESLDQTVDFGLISMT
CHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEECCCCCCHHHHHHHHCCCEEEEE
DAALDTQPVLIGSRRNFEIKLVNCELASQVKPDFIYRAATVTFDGTADSRDPELLAVYGE
CCCCCCCEEEEECCCCEEEEEEEEEHHCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECC
AQGVAIELLTAAGIPIPLGSTTADYQIVAGDNTLRFSAQLRIHPDRARAGGFSSLAKFTL
CCCEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEEEEEECCCCCCCCCHHHHHHHHH
SYL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2900238 [H]