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The map label for this gene is smfA [H]

Identifier: 157372903

GI number: 157372903

Start: 5161918

End: 5162448

Strand: Direct

Name: smfA [H]

Synonym: Spro_4671

Alternate gene names: 157372903

Gene position: 5161918-5162448 (Clockwise)

Preceding gene: 157372897

Following gene: 157372904

Centisome position: 94.73

GC content: 52.92

Gene sequence:

>531_bases
ATGAAACTGAATAAATTAATGCTGGCAACTGTGATTGCTTTCGCTTCTGCATCTGTTGCTCACGCCGCATCTAACCAGGG
TAGCGGTAAAGTCACTTTTACCGGTGAAATTATTGATGCGCCATGCAGCGTAGCACCGGAATCTGTTGACCAAACTGTGC
CAATGGGCCAAATCAGCAGCCGTCTGTTGGCCAAAGAAGGTAAATCCAGCTCTGAGCCATTCAGCATTGAACTGAAAGAC
TGTTCCATCGCCACGATGAAGAACGTCCAGGTGACCTTCACCGGGACTCCGGATCCAGATAACAGCAAACTGCTGGCTCT
GAGCGGCACCGCAACCGGCGCTGGCATCATGATCTATGACAACCTGCACTCCAAAGACGTTGAGCTGGGCACCGCGACCG
ATGGTCAGGGCCTGACCGAAGGCAATAACTCCCTGAAATTCGCCGCCTATCTGCAAGGCAGCAGCGCTTCTGGCGCCGTG
GTTCCAGGCGAATTCACCAGCGTTGCAAACTTCACTCTGGCCTACCTGTAA

Upstream 100 bases:

>100_bases
GGCTCCAACTACCGCGTCGGTGACATGAAGTTGCTGCCGCTGTGGGGGATTTAGATGTGCTGTTCTTTTTATTTAAATAC
TCTCTACAGGAACTTGAGAA

Downstream 100 bases:

>100_bases
TCCCTCGCTGGGGATATCACTGCGGTATCCCCGCTTTACCTGCACGGATATTGGGTAACGGCACCAACGGCAACAGGGAG
AGCCAGCATGACCAAGCGGA

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKLNKLMLATVIAFASASVAHAASNQGSGKVTFTGEIIDAPCSVAPESVDQTVPMGQISSRLLAKEGKSSSEPFSIELKD
CSIATMKNVQVTFTGTPDPDNSKLLALSGTATGAGIMIYDNLHSKDVELGTATDGQGLTEGNNSLKFAAYLQGSSASGAV
VPGEFTSVANFTLAYL

Sequences:

>Translated_176_residues
MKLNKLMLATVIAFASASVAHAASNQGSGKVTFTGEIIDAPCSVAPESVDQTVPMGQISSRLLAKEGKSSSEPFSIELKD
CSIATMKNVQVTFTGTPDPDNSKLLALSGTATGAGIMIYDNLHSKDVELGTATDGQGLTEGNNSLKFAAYLQGSSASGAV
VPGEFTSVANFTLAYL
>Mature_176_residues
MKLNKLMLATVIAFASASVAHAASNQGSGKVTFTGEIIDAPCSVAPESVDQTVPMGQISSRLLAKEGKSSSEPFSIELKD
CSIATMKNVQVTFTGTPDPDNSKLLALSGTATGAGIMIYDNLHSKDVELGTATDGQGLTEGNNSLKFAAYLQGSSASGAV
VPGEFTSVANFTLAYL

Specific function: Major structural component of mannose-resistant fimbriae of Serratia marcescens [H]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1789422, Length=168, Percent_Identity=35.1190476190476, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786938, Length=166, Percent_Identity=28.9156626506024, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1790769, Length=98, Percent_Identity=41.8367346938776, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI87081753, Length=154, Percent_Identity=35.0649350649351, Blast_Score=70, Evalue=6e-14,
Organism=Escherichia coli, GI1787781, Length=153, Percent_Identity=33.9869281045752, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1788674, Length=176, Percent_Identity=31.8181818181818, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18084; Mature: 18084

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNKLMLATVIAFASASVAHAASNQGSGKVTFTGEIIDAPCSVAPESVDQTVPMGQISS
CCCHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHCCCCHHHHHH
RLLAKEGKSSSEPFSIELKDCSIATMKNVQVTFTGTPDPDNSKLLALSGTATGAGIMIYD
HHHHHCCCCCCCCEEEEECCCEEEEECCEEEEECCCCCCCCCEEEEEECCCCCCEEEEEE
NLHSKDVELGTATDGQGLTEGNNSLKFAAYLQGSSASGAVVPGEFTSVANFTLAYL
CCCCCCEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCEECCCCCCEEEEEEEEC
>Mature Secondary Structure
MKLNKLMLATVIAFASASVAHAASNQGSGKVTFTGEIIDAPCSVAPESVDQTVPMGQISS
CCCHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHCCCCHHHHHH
RLLAKEGKSSSEPFSIELKDCSIATMKNVQVTFTGTPDPDNSKLLALSGTATGAGIMIYD
HHHHHCCCCCCCCEEEEECCCEEEEECCEEEEECCCCCCCCCEEEEEECCCCCCEEEEEE
NLHSKDVELGTATDGQGLTEGNNSLKFAAYLQGSSASGAVVPGEFTSVANFTLAYL
CCCCCCEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCEECCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2900238 [H]