| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is gntT [H]
Identifier: 157372883
GI number: 157372883
Start: 5138033
End: 5139349
Strand: Reverse
Name: gntT [H]
Synonym: Spro_4651
Alternate gene names: 157372883
Gene position: 5139349-5138033 (Counterclockwise)
Preceding gene: 157372884
Following gene: 157372882
Centisome position: 94.32
GC content: 57.48
Gene sequence:
>1317_bases ATGCCATTAGTGATTGTTGCAGGCGGCGTAGCGCTGCTGCTGCTGCTGATGATTCGCTTTAAGCTGAACGGTTTTATCTC TTTGATTCTGGTTGCTCTGGCGGTCGGGATCACCCAGGGGATGCCGGTCGATAAAGTGATCGGCTCCATCAAGGCCGGCG TTGGCGGCACGCTGGGCAGTCTGGCGTTGATCATGGGTTTTGGTGCCATGCTCGGCAAGCTGCTGGCGGACTGCGGCGGT GCCCAGCGCATCGCCACTACGCTTATAGAAAAGTTCGGTAAAAAACACATTCAGTGGGCAGTGGTGCTGACGGGCTTTAC CGTCGGCTTCGCGCTGTTCTATGAGGTGGGTTTCGTGCTGTTGCTGCCGCTGGTATTCAGTATCGCCGCTTCCGCGCGCG TTCCTCTGCTGTATGTCGGTGTGCCAATGGCGGCTGCGCTGTCGGTAACCCACGGTTTCCTGCCGCCGCACCCTGGCCCA ACGGCGATCGCCACCATCTTCCATGCCGATATGGGTAAAACCCTGCTGTACGGTACGCTGCTGGCTATCCCGACGGTGAT CCTGGCCGGTCCGGTTTATGCCCGCTTCCTGAAAGGTATCGACAAGCCGGTACCGGAAGGCCTGTATAACCCAAAAATCT TCACCGAAGCGGAAATGCCAAGCTTTGGTATCAGCGTGGCAACCTCTCTGGTGCCGGTGATCCTGATGGCGTTGCGCGCG GTAGCCGAAATGGTGCTGCCGAAGGGTCATAGCCTGTTGCGCTTTGCCGAGTTCTTCGGTGATCCGGTAATGGCGACGCT GATTGCGGTGCTGATTGCTATCTTCACCTTTGGCCTGAACCGTGGCCGCACCATGGATGAAGTGATGGGCACCATCACCG ACTCCATCAAGATTATCGCCATGATGCTGTTGATCATCGGCGGTGGCGGTGCGTTCAAGCAGGTGCTGGTCGACAGCGGC GTAGAGAAATATATTGCCGCCCTGATGGAAGGCAGTAACGTCTCGCCGATCCTGCTGGCATGGTCGATTGCCGCCGCACT GCGTTTGGCACTGGGTTCGGCTACCGTGGCGGCGATTACCGCCGGGGGTATTGTTGCTCCGCTGATCGCCACTACCGGCG CCAGTCCGGAACTGATGGTGATCGCAGTCGGTTCAGGCAGCGTGATTTTCTCTCACGTCAATGACCCGGGTTTCTGGCTG TTCAAGGAGTACTTCAACCTGAGCATCATGGAAACCATTAAATCCTGGTCGGTGCTGGAAACCATCATTTCAGTCTGTGG TTTGGTAGGTTGCCTACTGCTGGCGACGGTCGTCTAA
Upstream 100 bases:
>100_bases AGCTCGTCTTCTAACACCGGGAAGAGCCTAAAAATACAACAAACGCGCGCTTTACGGCCTATCGTAAAGAGGTCTGCGAT AAAAAGGTTGGAGAAAAATT
Downstream 100 bases:
>100_bases AATACTGAGGTTTCCGGCACCTTGGCGGTGTCGGAAACTATTTTGAGTTTGGGGCGCATTTGATGACGCTGCCAGCGTCA TCTGATCCCATAAGGGCATG
Product: gluconate transporter
Products: Proton [Cytoplasm]; gluconate [Cytoplasm] [C]
Alternate protein names: Gluconate permease; Gnt-I system [H]
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MPLVIVAGGVALLLLLMIRFKLNGFISLILVALAVGITQGMPVDKVIGSIKAGVGGTLGSLALIMGFGAMLGKLLADCGG AQRIATTLIEKFGKKHIQWAVVLTGFTVGFALFYEVGFVLLLPLVFSIAASARVPLLYVGVPMAAALSVTHGFLPPHPGP TAIATIFHADMGKTLLYGTLLAIPTVILAGPVYARFLKGIDKPVPEGLYNPKIFTEAEMPSFGISVATSLVPVILMALRA VAEMVLPKGHSLLRFAEFFGDPVMATLIAVLIAIFTFGLNRGRTMDEVMGTITDSIKIIAMMLLIIGGGGAFKQVLVDSG VEKYIAALMEGSNVSPILLAWSIAAALRLALGSATVAAITAGGIVAPLIATTGASPELMVIAVGSGSVIFSHVNDPGFWL FKEYFNLSIMETIKSWSVLETIISVCGLVGCLLLATVV
Sequences:
>Translated_438_residues MPLVIVAGGVALLLLLMIRFKLNGFISLILVALAVGITQGMPVDKVIGSIKAGVGGTLGSLALIMGFGAMLGKLLADCGG AQRIATTLIEKFGKKHIQWAVVLTGFTVGFALFYEVGFVLLLPLVFSIAASARVPLLYVGVPMAAALSVTHGFLPPHPGP TAIATIFHADMGKTLLYGTLLAIPTVILAGPVYARFLKGIDKPVPEGLYNPKIFTEAEMPSFGISVATSLVPVILMALRA VAEMVLPKGHSLLRFAEFFGDPVMATLIAVLIAIFTFGLNRGRTMDEVMGTITDSIKIIAMMLLIIGGGGAFKQVLVDSG VEKYIAALMEGSNVSPILLAWSIAAALRLALGSATVAAITAGGIVAPLIATTGASPELMVIAVGSGSVIFSHVNDPGFWL FKEYFNLSIMETIKSWSVLETIISVCGLVGCLLLATVV >Mature_437_residues PLVIVAGGVALLLLLMIRFKLNGFISLILVALAVGITQGMPVDKVIGSIKAGVGGTLGSLALIMGFGAMLGKLLADCGGA QRIATTLIEKFGKKHIQWAVVLTGFTVGFALFYEVGFVLLLPLVFSIAASARVPLLYVGVPMAAALSVTHGFLPPHPGPT AIATIFHADMGKTLLYGTLLAIPTVILAGPVYARFLKGIDKPVPEGLYNPKIFTEAEMPSFGISVATSLVPVILMALRAV AEMVLPKGHSLLRFAEFFGDPVMATLIAVLIAIFTFGLNRGRTMDEVMGTITDSIKIIAMMLLIIGGGGAFKQVLVDSGV EKYIAALMEGSNVSPILLAWSIAAALRLALGSATVAAITAGGIVAPLIATTGASPELMVIAVGSGSVIFSHVNDPGFWLF KEYFNLSIMETIKSWSVLETIISVCGLVGCLLLATVV
Specific function: Part of the gluconate utilization system Gnt-I; high- affinity intake of gluconate [H]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gntP permease family [H]
Homologues:
Organism=Escherichia coli, GI48994935, Length=438, Percent_Identity=85.8447488584475, Blast_Score=734, Evalue=0.0, Organism=Escherichia coli, GI1790716, Length=438, Percent_Identity=62.1004566210046, Blast_Score=548, Evalue=1e-157, Organism=Escherichia coli, GI2367370, Length=449, Percent_Identity=49.8886414253898, Blast_Score=379, Evalue=1e-106, Organism=Escherichia coli, GI1790776, Length=435, Percent_Identity=40.2298850574713, Blast_Score=343, Evalue=1e-95, Organism=Escherichia coli, GI1788707, Length=433, Percent_Identity=36.9515011547344, Blast_Score=267, Evalue=1e-72, Organism=Escherichia coli, GI48994939, Length=426, Percent_Identity=36.3849765258216, Blast_Score=266, Evalue=2e-72, Organism=Escherichia coli, GI1789097, Length=440, Percent_Identity=33.4090909090909, Blast_Score=217, Evalue=1e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 45680; Mature: 45549
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVIVAGGVALLLLLMIRFKLNGFISLILVALAVGITQGMPVDKVIGSIKAGVGGTLGS CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHH LALIMGFGAMLGKLLADCGGAQRIATTLIEKFGKKHIQWAVVLTGFTVGFALFYEVGFVL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPLVFSIAASARVPLLYVGVPMAAALSVTHGFLPPHPGPTAIATIFHADMGKTLLYGTL HHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHH LAIPTVILAGPVYARFLKGIDKPVPEGLYNPKIFTEAEMPSFGISVATSLVPVILMALRA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH VAEMVLPKGHSLLRFAEFFGDPVMATLIAVLIAIFTFGLNRGRTMDEVMGTITDSIKIIA HHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH MMLLIIGGGGAFKQVLVDSGVEKYIAALMEGSNVSPILLAWSIAAALRLALGSATVAAIT HHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH AGGIVAPLIATTGASPELMVIAVGSGSVIFSHVNDPGFWLFKEYFNLSIMETIKSWSVLE HCHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHH TIISVCGLVGCLLLATVV HHHHHHHHHHHHHHHHCC >Mature Secondary Structure PLVIVAGGVALLLLLMIRFKLNGFISLILVALAVGITQGMPVDKVIGSIKAGVGGTLGS CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHH LALIMGFGAMLGKLLADCGGAQRIATTLIEKFGKKHIQWAVVLTGFTVGFALFYEVGFVL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPLVFSIAASARVPLLYVGVPMAAALSVTHGFLPPHPGPTAIATIFHADMGKTLLYGTL HHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHH LAIPTVILAGPVYARFLKGIDKPVPEGLYNPKIFTEAEMPSFGISVATSLVPVILMALRA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH VAEMVLPKGHSLLRFAEFFGDPVMATLIAVLIAIFTFGLNRGRTMDEVMGTITDSIKIIA HHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH MMLLIIGGGGAFKQVLVDSGVEKYIAALMEGSNVSPILLAWSIAAALRLALGSATVAAIT HHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH AGGIVAPLIATTGASPELMVIAVGSGSVIFSHVNDPGFWLFKEYFNLSIMETIKSWSVLE HCHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHH TIISVCGLVGCLLLATVV HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; gluconate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 2845225; 7984428; 3040894; 9045817 [H]