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The map label for this gene is licH [H]

Identifier: 157372823

GI number: 157372823

Start: 5063910

End: 5065217

Strand: Direct

Name: licH [H]

Synonym: Spro_4591

Alternate gene names: 157372823

Gene position: 5063910-5065217 (Clockwise)

Preceding gene: 157372822

Following gene: 157372824

Centisome position: 92.94

GC content: 57.57

Gene sequence:

>1308_bases
ATGAAATCGTTAAAAATCGCCGTCATCGGCGGCGGCAGCAGCTACACGCCAGAATTGGTCGATGGCTTGATCCAGCGTAT
CGAAGAACTGCCGGTCACCGAACTGGCGCTGGTTGACGTTGAGCCTGGCCGTGAAAAGGTCGAGATTATTGCCGCGCTGA
CCGAACGCATGCTGGCGCGCCACGGGCTGGAGCAGGTGAAGGTCAGCGTGCATTTCGAACTGGATGAGGCCATTCGCGAC
GCCAATTTCGTCCTGACCCAGTTCCGCGTGGGTCAGTTGCCGGCACGCGCCGCCGACGAGCGCCTGGGGCTGAAATACGA
TTTAATCGGCCAGGAAACCACCGGCGTTGGCGGCTTCGCCAAGGCATTGCGTACCATTCCGGTGATGCTGGATATTGCAC
GCCGGGTGGAAAAACTGGCGCCTGACGCCTGGATCATCAACTTCACCAACCCAGCCGGCATCGTCACCGAAGCGGTCTCC
CGCTACACCAAAGCGAAAATCATCGGCCTGTGCAACGTGCCGATCAGCATGCATCACATGATTGCCAACATGCTGAAAGT
CCCTTCGCAAGAGGTGCAATTGCAGTTCGCCGGGCTGAACCACATGGTGTGGGTACATCAGGTGCTGCAAAACGGGCATG
ACGTCACCGGCAAGGTGATCGACATGTTGTGCGACGGTGCCGCGCTGACCATGAACAACATCAAGGAAGAACCTTGGCAG
CCGGACTTCCTGCGCGCCGTCGGGGCGATCCCTTGCCCCTATCACCGCTATTTCTACCAAACCAAAGAAATGCTGGCCGA
GGAAATTGCCGCAGCAGCCGAACGCGGTACCCGCGCCGAGCAGGTGATGAAGGTGGAGAAAGAGCTGTTTGAGCTGTACG
CCGATCCACATCTCGACAGCAAACCGGAGCAGTTAAGTTTCCGCGGTGGATCATATTATTCGGAAGTGGCGCTGGAGCTA
ATTCGTGCGATCCATAATAATCTCGGTACGCAATTAGTCGTTAATACCGCAAACCGTGGCGCTATTCGCGGTTTACCGGA
CGACGCGGTGATAGAAACCAACTGTATCGTCGATGCTCAGGGTGCTCATCCGCTGACCTTCGGCACGCTGCCGGATTCCA
TGCATGCGCTGACCCAACAGGTGAAAGCCTATGAGCGCCTGACCATCGAAGCCGCAGTGCACGGCGATCGCCGCAGTGGC
CTGCTGGCGTTGGTCACCAACCCGTTGGTCGGCAATGCCAATGTGGCGCAGCCGCTGTTGGATGAAGTGCTGGCGGTGAA
CGCGCCTTATTTGCCTCAGTTTAAATAA

Upstream 100 bases:

>100_bases
TTCATGCCCAGGATCATCTGATGAACGCCATGGTGATCCAGGATCTGGCGGATGACATGATTGAGCTTTACCGCCGTCAG
GTCAAAATGGAGATTCGTGC

Downstream 100 bases:

>100_bases
CCGTCGGGCCAACCGCGGTTGCTGATACATTGCTATACCTAGTATACAGGGGTCGCTGAGTCGGCCCCATTTTTGTCGTA
ATCAGGAGTCGGATGATGGT

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MKSLKIAVIGGGSSYTPELVDGLIQRIEELPVTELALVDVEPGREKVEIIAALTERMLARHGLEQVKVSVHFELDEAIRD
ANFVLTQFRVGQLPARAADERLGLKYDLIGQETTGVGGFAKALRTIPVMLDIARRVEKLAPDAWIINFTNPAGIVTEAVS
RYTKAKIIGLCNVPISMHHMIANMLKVPSQEVQLQFAGLNHMVWVHQVLQNGHDVTGKVIDMLCDGAALTMNNIKEEPWQ
PDFLRAVGAIPCPYHRYFYQTKEMLAEEIAAAAERGTRAEQVMKVEKELFELYADPHLDSKPEQLSFRGGSYYSEVALEL
IRAIHNNLGTQLVVNTANRGAIRGLPDDAVIETNCIVDAQGAHPLTFGTLPDSMHALTQQVKAYERLTIEAAVHGDRRSG
LLALVTNPLVGNANVAQPLLDEVLAVNAPYLPQFK

Sequences:

>Translated_435_residues
MKSLKIAVIGGGSSYTPELVDGLIQRIEELPVTELALVDVEPGREKVEIIAALTERMLARHGLEQVKVSVHFELDEAIRD
ANFVLTQFRVGQLPARAADERLGLKYDLIGQETTGVGGFAKALRTIPVMLDIARRVEKLAPDAWIINFTNPAGIVTEAVS
RYTKAKIIGLCNVPISMHHMIANMLKVPSQEVQLQFAGLNHMVWVHQVLQNGHDVTGKVIDMLCDGAALTMNNIKEEPWQ
PDFLRAVGAIPCPYHRYFYQTKEMLAEEIAAAAERGTRAEQVMKVEKELFELYADPHLDSKPEQLSFRGGSYYSEVALEL
IRAIHNNLGTQLVVNTANRGAIRGLPDDAVIETNCIVDAQGAHPLTFGTLPDSMHALTQQVKAYERLTIEAAVHGDRRSG
LLALVTNPLVGNANVAQPLLDEVLAVNAPYLPQFK
>Mature_435_residues
MKSLKIAVIGGGSSYTPELVDGLIQRIEELPVTELALVDVEPGREKVEIIAALTERMLARHGLEQVKVSVHFELDEAIRD
ANFVLTQFRVGQLPARAADERLGLKYDLIGQETTGVGGFAKALRTIPVMLDIARRVEKLAPDAWIINFTNPAGIVTEAVS
RYTKAKIIGLCNVPISMHHMIANMLKVPSQEVQLQFAGLNHMVWVHQVLQNGHDVTGKVIDMLCDGAALTMNNIKEEPWQ
PDFLRAVGAIPCPYHRYFYQTKEMLAEEIAAAAERGTRAEQVMKVEKELFELYADPHLDSKPEQLSFRGGSYYSEVALEL
IRAIHNNLGTQLVVNTANRGAIRGLPDDAVIETNCIVDAQGAHPLTFGTLPDSMHALTQQVKAYERLTIEAAVHGDRRSG
LLALVTNPLVGNANVAQPLLDEVLAVNAPYLPQFK

Specific function: Hydrolyzes phospho-beta-glucosides (Probable) [H]

COG id: COG1486

COG function: function code G; Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 4 family [H]

Homologues:

Organism=Escherichia coli, GI1788029, Length=438, Percent_Identity=44.0639269406393, Blast_Score=357, Evalue=1e-100,
Organism=Escherichia coli, GI1790560, Length=465, Percent_Identity=26.2365591397849, Blast_Score=128, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019802
- InterPro:   IPR001088
- InterPro:   IPR022616
- InterPro:   IPR015955
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02056 Glyco_hydro_4; PF11975 Glyco_hydro_4C [H]

EC number: =3.2.1.86 [H]

Molecular weight: Translated: 47885; Mature: 47885

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS01324 GLYCOSYL_HYDROL_F4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLKIAVIGGGSSYTPELVDGLIQRIEELPVTELALVDVEPGREKVEIIAALTERMLAR
CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
HGLEQVKVSVHFELDEAIRDANFVLTQFRVGQLPARAADERLGLKYDLIGQETTGVGGFA
CCHHHEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCHHHH
KALRTIPVMLDIARRVEKLAPDAWIINFTNPAGIVTEAVSRYTKAKIIGLCNVPISMHHM
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHH
IANMLKVPSQEVQLQFAGLNHMVWVHQVLQNGHDVTGKVIDMLCDGAALTMNNIKEEPWQ
HHHHHHCCCHHHEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEHHCCCCCCCC
PDFLRAVGAIPCPYHRYFYQTKEMLAEEIAAAAERGTRAEQVMKVEKELFELYADPHLDS
CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
KPEQLSFRGGSYYSEVALELIRAIHNNLGTQLVVNTANRGAIRGLPDDAVIETNCIVDAQ
CCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEECEEEECC
GAHPLTFGTLPDSMHALTQQVKAYERLTIEAAVHGDRRSGLLALVTNPLVGNANVAQPLL
CCCCEEECCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHH
DEVLAVNAPYLPQFK
HHHHHCCCCCCCCCC
>Mature Secondary Structure
MKSLKIAVIGGGSSYTPELVDGLIQRIEELPVTELALVDVEPGREKVEIIAALTERMLAR
CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
HGLEQVKVSVHFELDEAIRDANFVLTQFRVGQLPARAADERLGLKYDLIGQETTGVGGFA
CCHHHEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCHHHH
KALRTIPVMLDIARRVEKLAPDAWIINFTNPAGIVTEAVSRYTKAKIIGLCNVPISMHHM
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHH
IANMLKVPSQEVQLQFAGLNHMVWVHQVLQNGHDVTGKVIDMLCDGAALTMNNIKEEPWQ
HHHHHHCCCHHHEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEHHCCCCCCCC
PDFLRAVGAIPCPYHRYFYQTKEMLAEEIAAAAERGTRAEQVMKVEKELFELYADPHLDS
CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
KPEQLSFRGGSYYSEVALELIRAIHNNLGTQLVVNTANRGAIRGLPDDAVIETNCIVDAQ
CCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEECEEEECC
GAHPLTFGTLPDSMHALTQQVKAYERLTIEAAVHGDRRSGLLALVTNPLVGNANVAQPLL
CCCCEEECCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHH
DEVLAVNAPYLPQFK
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8990303; 9384377; 8969509 [H]