| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is cah [H]
Identifier: 157372655
GI number: 157372655
Start: 4895666
End: 4896400
Strand: Direct
Name: cah [H]
Synonym: Spro_4422
Alternate gene names: 157372655
Gene position: 4895666-4896400 (Clockwise)
Preceding gene: 157372654
Following gene: 157372656
Centisome position: 89.85
GC content: 54.83
Gene sequence:
>735_bases ATGAAAGGGAAATTATTACTCGCCGCTTTACTGATCGCCGGCTTTTCGGCCAACGCCACAGAGCAAGCCCATTGGGGCTA TGAAGGTCAGGAAGATCCGGCACACTGGGGAAAACTCTCTCCGGATTTTTCGCTGTGCGAAACCGGTAAGAACCAGTCAC CGGTTAATGTTAAAGGTGCTCTGAAAACCCAGCACGACAAACTGAAACTGGCTTTCCAACCAGGCAAACAGCAGATCGTC AATAACGGCCATACCGTGCAGGTAAACGTCAGCGGCGGCAATACCCTGGTGCTGGATAACGACACTTTCACGCTGCAACA ATTTCACTTCCACGCCCCGAGCGAAAACGAAATTGACGGTAAGCAATTCCCCCTTGAGGCGCACTTTGTCTATAAAGACC AACAGGGTGCACTGGCAGTCCTGGCATTGATGTTCCAGCAAGGCAAAGCCAACCCGCAGCTGGCGCAGGCCTGGCGGCAA ATGCCGACCGCCGTCGATCAGACCGCGGTGCTGACCACGCCGCTGGATATCAAGGCGCTGCTCCCTCAAAACTTTAACTT CTATCGGTTCAGCGGTTCGTTAACCACGCCCCCTTGTTCCGAAGGGGTAAGCTGGATGGTGCTGGATAAGCCTGTCAGCG CCTCTGCCGAGCAGATCGCTCAATTCCGCGCCGTGGTACAGCATGCGAACAATCGTCCGCTACAGGCGCTGAACGGCCGC GTAATCATCGACTAA
Upstream 100 bases:
>100_bases GACAAAAAGCAGGCGTATTCTGCTGCAGGCGCGATCGCAGCCGATTTTTTTAGCCGCTGTCCGCCAAAGACAATTAACGA TTTTTCAATAAGGATTGGCA
Downstream 100 bases:
>100_bases GGCTGTCGGAATAACTTCACCGCCGGTTTGATCCCCGGCGGTGAACAAATGCGTTTTTAATCGAAACCTTCACCACGCGA TTTCAGCGTAATTGTGCCCC
Product: carbonate dehydratase
Products: NA
Alternate protein names: Carbonate dehydratase [H]
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MKGKLLLAALLIAGFSANATEQAHWGYEGQEDPAHWGKLSPDFSLCETGKNQSPVNVKGALKTQHDKLKLAFQPGKQQIV NNGHTVQVNVSGGNTLVLDNDTFTLQQFHFHAPSENEIDGKQFPLEAHFVYKDQQGALAVLALMFQQGKANPQLAQAWRQ MPTAVDQTAVLTTPLDIKALLPQNFNFYRFSGSLTTPPCSEGVSWMVLDKPVSASAEQIAQFRAVVQHANNRPLQALNGR VIID
Sequences:
>Translated_244_residues MKGKLLLAALLIAGFSANATEQAHWGYEGQEDPAHWGKLSPDFSLCETGKNQSPVNVKGALKTQHDKLKLAFQPGKQQIV NNGHTVQVNVSGGNTLVLDNDTFTLQQFHFHAPSENEIDGKQFPLEAHFVYKDQQGALAVLALMFQQGKANPQLAQAWRQ MPTAVDQTAVLTTPLDIKALLPQNFNFYRFSGSLTTPPCSEGVSWMVLDKPVSASAEQIAQFRAVVQHANNRPLQALNGR VIID >Mature_244_residues MKGKLLLAALLIAGFSANATEQAHWGYEGQEDPAHWGKLSPDFSLCETGKNQSPVNVKGALKTQHDKLKLAFQPGKQQIV NNGHTVQVNVSGGNTLVLDNDTFTLQQFHFHAPSENEIDGKQFPLEAHFVYKDQQGALAVLALMFQQGKANPQLAQAWRQ MPTAVDQTAVLTTPLDIKALLPQNFNFYRFSGSLTTPPCSEGVSWMVLDKPVSASAEQIAQFRAVVQHANNRPLQALNGR VIID
Specific function: Reversible hydration of carbon dioxide [H]
COG id: COG3338
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha-carbonic anhydrase family [H]
Homologues:
Organism=Homo sapiens, GI258679498, Length=259, Percent_Identity=32.046332046332, Blast_Score=125, Evalue=3e-29, Organism=Homo sapiens, GI192447434, Length=259, Percent_Identity=32.046332046332, Blast_Score=125, Evalue=3e-29, Organism=Homo sapiens, GI192447432, Length=259, Percent_Identity=32.046332046332, Blast_Score=125, Evalue=3e-29, Organism=Homo sapiens, GI192447430, Length=259, Percent_Identity=32.046332046332, Blast_Score=125, Evalue=3e-29, Organism=Homo sapiens, GI4502517, Length=259, Percent_Identity=32.046332046332, Blast_Score=125, Evalue=3e-29, Organism=Homo sapiens, GI4885101, Length=256, Percent_Identity=31.640625, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI4557395, Length=256, Percent_Identity=32.03125, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI169636420, Length=260, Percent_Identity=32.6923076923077, Blast_Score=103, Evalue=9e-23, Organism=Homo sapiens, GI38348436, Length=257, Percent_Identity=28.4046692607004, Blast_Score=101, Evalue=5e-22, Organism=Homo sapiens, GI70167127, Length=258, Percent_Identity=32.5581395348837, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI62240989, Length=198, Percent_Identity=32.8282828282828, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI4885099, Length=261, Percent_Identity=26.8199233716475, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI6005723, Length=237, Percent_Identity=27.8481012658228, Blast_Score=90, Evalue=1e-18, Organism=Homo sapiens, GI4502521, Length=236, Percent_Identity=28.8135593220339, Blast_Score=88, Evalue=6e-18, Organism=Homo sapiens, GI4502519, Length=272, Percent_Identity=27.9411764705882, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI22027500, Length=256, Percent_Identity=26.953125, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI9951923, Length=252, Percent_Identity=27.7777777777778, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI130979954, Length=255, Percent_Identity=26.6666666666667, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI130979679, Length=255, Percent_Identity=26.6666666666667, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI9910366, Length=255, Percent_Identity=26.6666666666667, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI6912284, Length=285, Percent_Identity=28.0701754385965, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI4502515, Length=244, Percent_Identity=29.5081967213115, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI45935383, Length=244, Percent_Identity=29.5081967213115, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI194097398, Length=272, Percent_Identity=26.4705882352941, Blast_Score=77, Evalue=9e-15, Organism=Homo sapiens, GI91208428, Length=242, Percent_Identity=28.9256198347107, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17568715, Length=253, Percent_Identity=31.2252964426877, Blast_Score=107, Evalue=5e-24, Organism=Caenorhabditis elegans, GI71995280, Length=269, Percent_Identity=27.5092936802974, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI24645604, Length=278, Percent_Identity=28.7769784172662, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI21358169, Length=279, Percent_Identity=29.3906810035842, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI17737413, Length=251, Percent_Identity=29.0836653386454, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI18858185, Length=249, Percent_Identity=27.710843373494, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI221329761, Length=286, Percent_Identity=24.1258741258741, Blast_Score=84, Evalue=6e-17, Organism=Drosophila melanogaster, GI161079350, Length=274, Percent_Identity=27.3722627737226, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI24650523, Length=247, Percent_Identity=27.1255060728745, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI161079354, Length=268, Percent_Identity=27.6119402985075, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001148 - InterPro: IPR018338 - InterPro: IPR018340 [H]
Pfam domain/function: PF00194 Carb_anhydrase [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 26741; Mature: 26741
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS00162 ALPHA_CA_1 ; PS51144 ALPHA_CA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGKLLLAALLIAGFSANATEQAHWGYEGQEDPAHWGKLSPDFSLCETGKNQSPVNVKGA CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEC LKTQHDKLKLAFQPGKQQIVNNGHTVQVNVSGGNTLVLDNDTFTLQQFHFHAPSENEIDG EECCCCEEEEEECCCHHHHHCCCCEEEEEECCCCEEEECCCCEEEEEEEECCCCCCCCCC KQFPLEAHFVYKDQQGALAVLALMFQQGKANPQLAQAWRQMPTAVDQTAVLTTPLDIKAL CCCCEEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHCCCEEEECCCCEEEE LPQNFNFYRFSGSLTTPPCSEGVSWMVLDKPVSASAEQIAQFRAVVQHANNRPLQALNGR CCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCE VIID EEEC >Mature Secondary Structure MKGKLLLAALLIAGFSANATEQAHWGYEGQEDPAHWGKLSPDFSLCETGKNQSPVNVKGA CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEC LKTQHDKLKLAFQPGKQQIVNNGHTVQVNVSGGNTLVLDNDTFTLQQFHFHAPSENEIDG EECCCCEEEEEECCCHHHHHCCCCEEEEEECCCCEEEECCCCEEEEEEEECCCCCCCCCC KQFPLEAHFVYKDQQGALAVLALMFQQGKANPQLAQAWRQMPTAVDQTAVLTTPLDIKAL CCCCEEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHCCCEEEECCCCEEEE LPQNFNFYRFSGSLTTPPCSEGVSWMVLDKPVSASAEQIAQFRAVVQHANNRPLQALNGR CCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCE VIID EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9811652 [H]