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The map label for this gene is elbB [H]

Identifier: 157372574

GI number: 157372574

Start: 4808392

End: 4809045

Strand: Reverse

Name: elbB [H]

Synonym: Spro_4341

Alternate gene names: 157372574

Gene position: 4809045-4808392 (Counterclockwise)

Preceding gene: 157372575

Following gene: 157372573

Centisome position: 88.26

GC content: 54.28

Gene sequence:

>654_bases
ATGAAAAACGTTGGCGTAGTGCTGAGTGGCTGTGGGGTTTATGACGGTTCGGAGATCCATGAAGCCGTCCTGACGCTGCT
GGCGTTGGACCGGGCGGGGGCGCAGGCGGTGTGTTTTGCCCCGGATACACCTCAACTTCATGTTATCAATCATTTATCTG
GCGATGTAGTGCCGGAAAATCGCAATGTTTTAGTGGAGTCTGCGCGCATTGCCAGAGGCAGGGTTCAGCCGCTTTCGCAG
GCTGACGCCAGCCAACTCGACGCCCTGATCGTCCCCGGCGGCTTTGGTGCGGCAAAGAACCTCAGCAGTTTTGCCAGCGA
AGGGGCGGAATGCTGGATTGATAAGGATTTGGCTAAGTTAACGCAGCAAATGCATAAGGCAAATAAACCAATTGGTTTTA
TGTGTATTGCGCCTGCCTTGCTGCCGAAGTTGCTGGATCAACAAGTGCGGCTGACCATTGGCAACGATCCCGACCTGGGT
GAAGTGATTGATGCCATGGGCGGCGAGCCGGTGATTTGTCCGGTTGACGACATCGTAGTGGATATCGAGAACAAAGTGGT
GACTACGCCGGCCTATATGCTGGCGAAATCGATCGCTGAGGCGGCCAGCGGAATTGATAAGCTGGTTTCACGGGTGCTGG
ATTTGACTGAATGA

Upstream 100 bases:

>100_bases
AAGCGCTCTTGTTAGAAGATTCATTAAAATGTGTGATGTAGATTAGTGTTTGTCAACTCAGAGCACTAACCAGTTGACAG
TAGCGACAGGAGGAAGGGTG

Downstream 100 bases:

>100_bases
GAAAATCTGCGGGCAAATCGATTTTTTCCCGGCCCTGGTTTTGGCTGAAACGTGGATTAATTGTGCTGGTTGGCGCATGG
CTACTGGGGATCCTTGCCTT

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKNVGVVLSGCGVYDGSEIHEAVLTLLALDRAGAQAVCFAPDTPQLHVINHLSGDVVPENRNVLVESARIARGRVQPLSQ
ADASQLDALIVPGGFGAAKNLSSFASEGAECWIDKDLAKLTQQMHKANKPIGFMCIAPALLPKLLDQQVRLTIGNDPDLG
EVIDAMGGEPVICPVDDIVVDIENKVVTTPAYMLAKSIAEAASGIDKLVSRVLDLTE

Sequences:

>Translated_217_residues
MKNVGVVLSGCGVYDGSEIHEAVLTLLALDRAGAQAVCFAPDTPQLHVINHLSGDVVPENRNVLVESARIARGRVQPLSQ
ADASQLDALIVPGGFGAAKNLSSFASEGAECWIDKDLAKLTQQMHKANKPIGFMCIAPALLPKLLDQQVRLTIGNDPDLG
EVIDAMGGEPVICPVDDIVVDIENKVVTTPAYMLAKSIAEAASGIDKLVSRVLDLTE
>Mature_217_residues
MKNVGVVLSGCGVYDGSEIHEAVLTLLALDRAGAQAVCFAPDTPQLHVINHLSGDVVPENRNVLVESARIARGRVQPLSQ
ADASQLDALIVPGGFGAAKNLSSFASEGAECWIDKDLAKLTQQMHKANKPIGFMCIAPALLPKLLDQQVRLTIGNDPDLG
EVIDAMGGEPVICPVDDIVVDIENKVVTTPAYMLAKSIAEAASGIDKLVSRVLDLTE

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=224, Percent_Identity=47.3214285714286, Blast_Score=201, Evalue=4e-52,
Organism=Homo sapiens, GI296531408, Length=224, Percent_Identity=41.9642857142857, Blast_Score=153, Evalue=1e-37,
Organism=Escherichia coli, GI87082228, Length=217, Percent_Identity=71.4285714285714, Blast_Score=326, Evalue=7e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 22903; Mature: 22903

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVGVVLSGCGVYDGSEIHEAVLTLLALDRAGAQAVCFAPDTPQLHVINHLSGDVVPEN
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCCCCCCC
RNVLVESARIARGRVQPLSQADASQLDALIVPGGFGAAKNLSSFASEGAECWIDKDLAKL
CCEEEEHHHHHHCCCCCCHHCCHHHCCEEEECCCCCCHHHHHHHHHCCHHEEECHHHHHH
TQQMHKANKPIGFMCIAPALLPKLLDQQVRLTIGNDPDLGEVIDAMGGEPVICPVDDIVV
HHHHHHCCCCEEEEHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCEEEECHHHEEE
DIENKVVTTPAYMLAKSIAEAASGIDKLVSRVLDLTE
ECCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNVGVVLSGCGVYDGSEIHEAVLTLLALDRAGAQAVCFAPDTPQLHVINHLSGDVVPEN
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCCCCCCC
RNVLVESARIARGRVQPLSQADASQLDALIVPGGFGAAKNLSSFASEGAECWIDKDLAKL
CCEEEEHHHHHHCCCCCCHHCCHHHCCEEEECCCCCCHHHHHHHHHCCHHEEECHHHHHH
TQQMHKANKPIGFMCIAPALLPKLLDQQVRLTIGNDPDLGEVIDAMGGEPVICPVDDIVV
HHHHHHCCCCEEEEHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCEEEECHHHEEE
DIENKVVTTPAYMLAKSIAEAASGIDKLVSRVLDLTE
ECCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]