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The map label for this gene is yraN [C]

Identifier: 157372570

GI number: 157372570

Start: 4806003

End: 4806356

Strand: Direct

Name: yraN [C]

Synonym: Spro_4337

Alternate gene names: 157372570

Gene position: 4806003-4806356 (Clockwise)

Preceding gene: 157372569

Following gene: 157372571

Centisome position: 88.2

GC content: 60.17

Gene sequence:

>354_bases
TTGAGTCAACGCGCCATAGGGGCGGGCTATGAGTTACAGGCCCGCCACTATCTGGAACGCGCCGGGCTCACCTTCTGCGC
CGCCAATGTGGCGCTGCGCGGCGGTGAGCTCGATCTCATCATGCGCGATGGTCAAACCTGGGTGTTCGTTGAAGTCCGCT
ACCGCCGCAGTGACGCTTTTGGCGGTGCGGCTGCCAGCGTTACTTATCGCAAGCAGCAGCGGTTGCTGCATGCCGCCGCC
GTGTGGCTGGCGGGACGCGGAGCCAGTTTTGACACATCGTCTTGCCGTTTTGATGTTTTGGCCATCACCGGTAGCCAGTT
AGAATGGATACCCAACGCCTTCAATGCGGATTAA

Upstream 100 bases:

>100_bases
TCTCCGGCACCACTGGCGTACTCACCGCCGCGCCAGGCTGTGTGATCAACAGAAAGCTGCCTTGGCTGCAATATCGCCAG
GGCACGGTCGTTCCGGTCTC

Downstream 100 bases:

>100_bases
TCATGGTTTACCGGTGCAGACCGGCCCTTTGACTTAGTGGATTAATACAACGTGCTGGATAGAATTAAAGCCTGTTTTAC
CGAAAGCATCCAAACCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSQRAIGAGYELQARHYLERAGLTFCAANVALRGGELDLIMRDGQTWVFVEVRYRRSDAFGGAAASVTYRKQQRLLHAAA
VWLAGRGASFDTSSCRFDVLAITGSQLEWIPNAFNAD

Sequences:

>Translated_117_residues
MSQRAIGAGYELQARHYLERAGLTFCAANVALRGGELDLIMRDGQTWVFVEVRYRRSDAFGGAAASVTYRKQQRLLHAAA
VWLAGRGASFDTSSCRFDVLAITGSQLEWIPNAFNAD
>Mature_116_residues
SQRAIGAGYELQARHYLERAGLTFCAANVALRGGELDLIMRDGQTWVFVEVRYRRSDAFGGAAASVTYRKQQRLLHAAAV
WLAGRGASFDTSSCRFDVLAITGSQLEWIPNAFNAD

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=115, Percent_Identity=59.1304347826087, Blast_Score=140, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4337_SERP5 (A8GJZ1)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001480559.1
- ProteinModelPortal:   A8GJZ1
- STRING:   A8GJZ1
- GeneID:   5605808
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_4337
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   QWLKNAF
- ProtClustDB:   PRK12497
- BioCyc:   SPRO399741:SPRO_4337-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 12887; Mature: 12755

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRAIGAGYELQARHYLERAGLTFCAANVALRGGELDLIMRDGQTWVFVEVRYRRSDAF
CCCCCCCCCEEEHHHHHHHHCCCEEEEEEEEEECCCEEEEEECCCEEEEEEEEEECCCCC
GGAAASVTYRKQQRLLHAAAVWLAGRGASFDTSSCRFDVLAITGSQLEWIPNAFNAD
CCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCEEECCCCCCCC
>Mature Secondary Structure 
SQRAIGAGYELQARHYLERAGLTFCAANVALRGGELDLIMRDGQTWVFVEVRYRRSDAF
CCCCCCCCEEEHHHHHHHHCCCEEEEEEEEEECCCEEEEEECCCEEEEEEEEEECCCCC
GGAAASVTYRKQQRLLHAAAVWLAGRGASFDTSSCRFDVLAITGSQLEWIPNAFNAD
CCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA