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The map label for this gene is yraM [H]

Identifier: 157372569

GI number: 157372569

Start: 4803982

End: 4806006

Strand: Direct

Name: yraM [H]

Synonym: Spro_4336

Alternate gene names: 157372569

Gene position: 4803982-4806006 (Clockwise)

Preceding gene: 157372567

Following gene: 157372570

Centisome position: 88.17

GC content: 58.57

Gene sequence:

>2025_bases
ATGCTTTCCTCAACATTCGTTCGTACCAAAGCAGGGCGTTCAAAGCCTGTCCGACTTACCGCAGTTATCGCAGCAGCCCT
GTTCCTTGCAGGCTGCCCAAGTCAGGCCCCGCAGACGCCGCCTGCCAATATACAGGACGAAGCGAGCGCCAGTTCCGATT
ACTATCTGCAGCAGCTGCAGCAAAGCAGCAATGATAACAAGGCTGACTGGCAATTACTTGCTATTCGCGCGTTGTTACGC
GAAGGGAAACTACCGCAGGCCAGTGAACAACTGAACCAACTGCCGAAAAACCTCAGCAGCGTGCAGCAGGTGGAAAGCCA
GTTGCTGACCGCAGAACTGCAGGTGGCGAACAAAAGCTACGTCAGCGCGCGCAGCACGCTGGGTCATATCGATAGCGGTT
CGCTATCAGCCAATCAGCTGGTGCGCTTCTACCAGGCGCAGATCGCGGTCAATCAGGGTAAAGCTTCCCTGCCGCTAATC
CGCGCTTACATTGCGCAAGAGCCATTGCTGACCGGCAAGGCACATCAGAACAACCTGGATCAAACCTGGCAGTCACTGCT
GCAACTGACGCCGCAGGACATGAACAGTCTGGTGATCAACGCCAATGAAAATGTGCTGCAAGGCTGGCTGGATCTGCTGC
GGGTATATCAGGACAACAAACAGGATCCTGACCTGCTGAAGGCCGGGATTAAAGACTGGCAGAACCGCTATCCGCAGAAC
CCGGCGGCAAAAACGTTACCGACCCAGTTGAACCAGGTACTGCACTTTACCCAGGCTTCCACGTCGAAAATCGCCCTGCT
GCTGCCGTTGAACGGCCAGGCCAAAGTGTTCGCCGACGCGATCCAAAAAGGCTTTGAAGCGGCTAAAAATGGCGTGACGC
CTTCTACGCCGGTTCAGCAACAACAACCCGCCAGCGTGCCTGAGCAGGCAGCGCAACCGGCATCAACCGATCCAAACGCC
AATGGTGCGGTGAGCACCTCGGCACCGGATGCGGCCCCGGTGACCGCCGCCCAGCCTTCTGCGCCGTCTACTGCGCCAAT
TACACCGCCGCAGGCCGCTAACGCACAGATTAAGGTGTATGATACCTCCAGCCAGCCGCTGGCCGCGTTGCTGACGCAGG
CACAGCAGGATGGCGCGACCCTGGTGGTCGGCCCGCTGCTGAAAGAAAACGTCGATCAACTGGCCAGCAGCACCACTACG
CTGAACGTGCTGGCGCTCAATCAGCCGGAAACGCCGAAAGATAACCCGAATATCTGTTACTTCGCCCTTTCTCCGGAAGA
CGAAGCGCGTGATGCAGCCCGCCATATTTGGGAACAGCAGAAGCGGCAGCCGCTGTTGCTGATCCCACGCGGTGCCTTCG
GCGATCGCGTTGCCAAAGCCTTTAACCAGGAGTGGCAGAAACTGGGTGGCCAAACCGTGCTGCAGCAAGGCATCGGTTCC
GCCAGTGAGCTGCGCCAGATGGTCAACAGCGGTGGGATTCGCATGTCCGGTACGCCAATCTCCACCGCACCGGCGCCGCA
GGCAGTGACCATTGCCGGGCTGACTATTCCGGCACCACCAAGCGATACGCCTGCAACCAGCGGCGGCAGCGTAGACTCGG
TGTATATCGTCGCGACCCAGTCCCAGTTGACGCTGATTAAACCGATGATCGATATGGCCACCAACTCGCGCAGCAAACCG
GCAATGTACGCCAGTTCTCGCAGCTACCAGGCCGGTGCCGGCCCGGACTTCCGCCTGGAAATGGAAGGCCTGCAATTTAG
TGATATTCCATTGTTGGCCGGTGCTAACCCGCAGTTGTTGCAGCAGGCAAGCAGCCAGTTCCGCAACGACTATTCGCTGG
TGCGCCTGTACGCAATGGGGATGGATGCCTGGACATTGTCCAACCACTTTGCTGAAATGCGCCAGTTGCCTGGCTTCCAG
GTCTCCGGCACCACTGGCGTACTCACCGCCGCGCCAGGCTGTGTGATCAACAGAAAGCTGCCTTGGCTGCAATATCGCCA
GGGCACGGTCGTTCCGGTCTCTTGA

Upstream 100 bases:

>100_bases
GTTGATGCAGAAATGACTGATTGTTGGTGTTGATTCATTGTTTCATCCGGGTTGCCGATTTAATATTGAGCATCTTGAAA
AAAACATCACTGGATACAGT

Downstream 100 bases:

>100_bases
GTCAACGCGCCATAGGGGCGGGCTATGAGTTACAGGCCCGCCACTATCTGGAACGCGCCGGGCTCACCTTCTGCGCCGCC
AATGTGGCGCTGCGCGGCGG

Product: LppC family lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 674; Mature: 674

Protein sequence:

>674_residues
MLSSTFVRTKAGRSKPVRLTAVIAAALFLAGCPSQAPQTPPANIQDEASASSDYYLQQLQQSSNDNKADWQLLAIRALLR
EGKLPQASEQLNQLPKNLSSVQQVESQLLTAELQVANKSYVSARSTLGHIDSGSLSANQLVRFYQAQIAVNQGKASLPLI
RAYIAQEPLLTGKAHQNNLDQTWQSLLQLTPQDMNSLVINANENVLQGWLDLLRVYQDNKQDPDLLKAGIKDWQNRYPQN
PAAKTLPTQLNQVLHFTQASTSKIALLLPLNGQAKVFADAIQKGFEAAKNGVTPSTPVQQQQPASVPEQAAQPASTDPNA
NGAVSTSAPDAAPVTAAQPSAPSTAPITPPQAANAQIKVYDTSSQPLAALLTQAQQDGATLVVGPLLKENVDQLASSTTT
LNVLALNQPETPKDNPNICYFALSPEDEARDAARHIWEQQKRQPLLLIPRGAFGDRVAKAFNQEWQKLGGQTVLQQGIGS
ASELRQMVNSGGIRMSGTPISTAPAPQAVTIAGLTIPAPPSDTPATSGGSVDSVYIVATQSQLTLIKPMIDMATNSRSKP
AMYASSRSYQAGAGPDFRLEMEGLQFSDIPLLAGANPQLLQQASSQFRNDYSLVRLYAMGMDAWTLSNHFAEMRQLPGFQ
VSGTTGVLTAAPGCVINRKLPWLQYRQGTVVPVS

Sequences:

>Translated_674_residues
MLSSTFVRTKAGRSKPVRLTAVIAAALFLAGCPSQAPQTPPANIQDEASASSDYYLQQLQQSSNDNKADWQLLAIRALLR
EGKLPQASEQLNQLPKNLSSVQQVESQLLTAELQVANKSYVSARSTLGHIDSGSLSANQLVRFYQAQIAVNQGKASLPLI
RAYIAQEPLLTGKAHQNNLDQTWQSLLQLTPQDMNSLVINANENVLQGWLDLLRVYQDNKQDPDLLKAGIKDWQNRYPQN
PAAKTLPTQLNQVLHFTQASTSKIALLLPLNGQAKVFADAIQKGFEAAKNGVTPSTPVQQQQPASVPEQAAQPASTDPNA
NGAVSTSAPDAAPVTAAQPSAPSTAPITPPQAANAQIKVYDTSSQPLAALLTQAQQDGATLVVGPLLKENVDQLASSTTT
LNVLALNQPETPKDNPNICYFALSPEDEARDAARHIWEQQKRQPLLLIPRGAFGDRVAKAFNQEWQKLGGQTVLQQGIGS
ASELRQMVNSGGIRMSGTPISTAPAPQAVTIAGLTIPAPPSDTPATSGGSVDSVYIVATQSQLTLIKPMIDMATNSRSKP
AMYASSRSYQAGAGPDFRLEMEGLQFSDIPLLAGANPQLLQQASSQFRNDYSLVRLYAMGMDAWTLSNHFAEMRQLPGFQ
VSGTTGVLTAAPGCVINRKLPWLQYRQGTVVPVS
>Mature_674_residues
MLSSTFVRTKAGRSKPVRLTAVIAAALFLAGCPSQAPQTPPANIQDEASASSDYYLQQLQQSSNDNKADWQLLAIRALLR
EGKLPQASEQLNQLPKNLSSVQQVESQLLTAELQVANKSYVSARSTLGHIDSGSLSANQLVRFYQAQIAVNQGKASLPLI
RAYIAQEPLLTGKAHQNNLDQTWQSLLQLTPQDMNSLVINANENVLQGWLDLLRVYQDNKQDPDLLKAGIKDWQNRYPQN
PAAKTLPTQLNQVLHFTQASTSKIALLLPLNGQAKVFADAIQKGFEAAKNGVTPSTPVQQQQPASVPEQAAQPASTDPNA
NGAVSTSAPDAAPVTAAQPSAPSTAPITPPQAANAQIKVYDTSSQPLAALLTQAQQDGATLVVGPLLKENVDQLASSTTT
LNVLALNQPETPKDNPNICYFALSPEDEARDAARHIWEQQKRQPLLLIPRGAFGDRVAKAFNQEWQKLGGQTVLQQGIGS
ASELRQMVNSGGIRMSGTPISTAPAPQAVTIAGLTIPAPPSDTPATSGGSVDSVYIVATQSQLTLIKPMIDMATNSRSKP
AMYASSRSYQAGAGPDFRLEMEGLQFSDIPLLAGANPQLLQQASSQFRNDYSLVRLYAMGMDAWTLSNHFAEMRQLPGFQ
VSGTTGVLTAAPGCVINRKLPWLQYRQGTVVPVS

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1655 [H]

Homologues:

Organism=Escherichia coli, GI1789537, Length=688, Percent_Identity=55.8139534883721, Blast_Score=715, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007443 [H]

Pfam domain/function: PF04348 LppC [H]

EC number: NA

Molecular weight: Translated: 72269; Mature: 72269

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSTFVRTKAGRSKPVRLTAVIAAALFLAGCPSQAPQTPPANIQDEASASSDYYLQQLQ
CCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
QSSNDNKADWQLLAIRALLREGKLPQASEQLNQLPKNLSSVQQVESQLLTAELQVANKSY
HCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSARSTLGHIDSGSLSANQLVRFYQAQIAVNQGKASLPLIRAYIAQEPLLTGKAHQNNLD
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHH
QTWQSLLQLTPQDMNSLVINANENVLQGWLDLLRVYQDNKQDPDLLKAGIKDWQNRYPQN
HHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
PAAKTLPTQLNQVLHFTQASTSKIALLLPLNGQAKVFADAIQKGFEAAKNGVTPSTPVQQ
CCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
QQPASVPEQAAQPASTDPNANGAVSTSAPDAAPVTAAQPSAPSTAPITPPQAANAQIKVY
CCCCCCCHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
DTSSQPLAALLTQAQQDGATLVVGPLLKENVDQLASSTTTLNVLALNQPETPKDNPNICY
ECCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEE
FALSPEDEARDAARHIWEQQKRQPLLLIPRGAFGDRVAKAFNQEWQKLGGQTVLQQGIGS
EEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHCCCC
ASELRQMVNSGGIRMSGTPISTAPAPQAVTIAGLTIPAPPSDTPATSGGSVDSVYIVATQ
HHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEC
SQLTLIKPMIDMATNSRSKPAMYASSRSYQAGAGPDFRLEMEGLQFSDIPLLAGANPQLL
CCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEEECCCEECCCCEECCCCHHHH
QQASSQFRNDYSLVRLYAMGMDAWTLSNHFAEMRQLPGFQVSGTTGVLTAAPGCVINRKL
HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCEEEECCCCEEEECCC
PWLQYRQGTVVPVS
CCEEECCCEEEECC
>Mature Secondary Structure
MLSSTFVRTKAGRSKPVRLTAVIAAALFLAGCPSQAPQTPPANIQDEASASSDYYLQQLQ
CCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
QSSNDNKADWQLLAIRALLREGKLPQASEQLNQLPKNLSSVQQVESQLLTAELQVANKSY
HCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSARSTLGHIDSGSLSANQLVRFYQAQIAVNQGKASLPLIRAYIAQEPLLTGKAHQNNLD
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHH
QTWQSLLQLTPQDMNSLVINANENVLQGWLDLLRVYQDNKQDPDLLKAGIKDWQNRYPQN
HHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
PAAKTLPTQLNQVLHFTQASTSKIALLLPLNGQAKVFADAIQKGFEAAKNGVTPSTPVQQ
CCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
QQPASVPEQAAQPASTDPNANGAVSTSAPDAAPVTAAQPSAPSTAPITPPQAANAQIKVY
CCCCCCCHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
DTSSQPLAALLTQAQQDGATLVVGPLLKENVDQLASSTTTLNVLALNQPETPKDNPNICY
ECCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEE
FALSPEDEARDAARHIWEQQKRQPLLLIPRGAFGDRVAKAFNQEWQKLGGQTVLQQGIGS
EEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHCCCC
ASELRQMVNSGGIRMSGTPISTAPAPQAVTIAGLTIPAPPSDTPATSGGSVDSVYIVATQ
HHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEC
SQLTLIKPMIDMATNSRSKPAMYASSRSYQAGAGPDFRLEMEGLQFSDIPLLAGANPQLL
CCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEEECCCEECCCCEECCCCHHHH
QQASSQFRNDYSLVRLYAMGMDAWTLSNHFAEMRQLPGFQVSGTTGVLTAAPGCVINRKL
HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCEEEECCCCEEEECCC
PWLQYRQGTVVPVS
CCEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]