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The map label for this gene is yhaK [H]

Identifier: 157372567

GI number: 157372567

Start: 4801876

End: 4802577

Strand: Direct

Name: yhaK [H]

Synonym: Spro_4334

Alternate gene names: 157372567

Gene position: 4801876-4802577 (Clockwise)

Preceding gene: 157372565

Following gene: 157372569

Centisome position: 88.13

GC content: 59.97

Gene sequence:

>702_bases
ATGATTACATGCAGAACAGCACAACAATGCGGGCAAGCTGACTTTGGTTGGCTGCAGGCTCGCTACACCTTTTCTTTTGG
ACACTACTTCGATCCCAAGCTGATGGGCTACGCCTCGCTGCGGGTACTCAATCAGGAAGTGCTGGCGCCGGGTGCATCAT
TCCAGCCGCGCACTTATCCGAGCGTGGATATCCTGAACCTGATCCTGCAGGGTAAAGCGGAATACCGCGACAGCGAAGGC
AACACGGTCAACGCCAGGGCCGGTGAGGCTTTGCTGCTGGCCACCCAGCCGGGGCTGAGTTACAGCGAGCAAAACATCAG
CAGTGATATGCCGCTGACCCGCTTGCAACTGTGGCTGGATGCCTGCCCAGAGCGCAACAACGAACGCGTACAGCGCCTGA
TGTTGCCAGAGACCGGCCTGACACTGCTGGCCTCGCCAGACGGTGCTCAGGGCAGCCTGCAACTGCGTCAACAGGTGTGG
ATCCACCATCTGGATTTACAGCCGGGCGAACAGCAGACGCTGGCGCTGAACGGACCGCGGGCGTACCTGCAATCGATCCA
CGGCACCATTGAAGCCCATGGCGAGCGCAACGACAGCCAACACCTGACCTGCGGCGATGGGGCGTTTATCCACGAGGAAA
ACCGCCTGACCATCCGCGCCGAGACACCGCTGCGCGCACTGCTGATCGATTTGCCAGTGTAA

Upstream 100 bases:

>100_bases
CTCTGTCAGGAAATTTGAATATACCGACCAGATTAACTGGCTAACAATCCGCCGTCCAGATGCTTACCATCTAGATAATG
AATTTAGAGAGCCGATTGCC

Downstream 100 bases:

>100_bases
TGGGCATCCAGAAAGGAAAAAACCCCGCGTAACTTGCGTCACGCGGGGTTTTCTTTATAGAGGGAGCTGACCGGTAAGCC
GGGTTCTGTCGTGGACAGTC

Product: pirin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MITCRTAQQCGQADFGWLQARYTFSFGHYFDPKLMGYASLRVLNQEVLAPGASFQPRTYPSVDILNLILQGKAEYRDSEG
NTVNARAGEALLLATQPGLSYSEQNISSDMPLTRLQLWLDACPERNNERVQRLMLPETGLTLLASPDGAQGSLQLRQQVW
IHHLDLQPGEQQTLALNGPRAYLQSIHGTIEAHGERNDSQHLTCGDGAFIHEENRLTIRAETPLRALLIDLPV

Sequences:

>Translated_233_residues
MITCRTAQQCGQADFGWLQARYTFSFGHYFDPKLMGYASLRVLNQEVLAPGASFQPRTYPSVDILNLILQGKAEYRDSEG
NTVNARAGEALLLATQPGLSYSEQNISSDMPLTRLQLWLDACPERNNERVQRLMLPETGLTLLASPDGAQGSLQLRQQVW
IHHLDLQPGEQQTLALNGPRAYLQSIHGTIEAHGERNDSQHLTCGDGAFIHEENRLTIRAETPLRALLIDLPV
>Mature_233_residues
MITCRTAQQCGQADFGWLQARYTFSFGHYFDPKLMGYASLRVLNQEVLAPGASFQPRTYPSVDILNLILQGKAEYRDSEG
NTVNARAGEALLLATQPGLSYSEQNISSDMPLTRLQLWLDACPERNNERVQRLMLPETGLTLLASPDGAQGSLQLRQQVW
IHHLDLQPGEQQTLALNGPRAYLQSIHGTIEAHGERNDSQHLTCGDGAFIHEENRLTIRAETPLRALLIDLPV

Specific function: Does not have quercetin 2,3-dioxygenase activity [H]

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Escherichia coli, GI1789493, Length=233, Percent_Identity=71.244635193133, Blast_Score=348, Evalue=2e-97,
Organism=Escherichia coli, GI1789847, Length=236, Percent_Identity=33.0508474576271, Blast_Score=134, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin [H]

EC number: NA

Molecular weight: Translated: 25964; Mature: 25964

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITCRTAQQCGQADFGWLQARYTFSFGHYFDPKLMGYASLRVLNQEVLAPGASFQPRTYP
CEEECCHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SVDILNLILQGKAEYRDSEGNTVNARAGEALLLATQPGLSYSEQNISSDMPLTRLQLWLD
CHHHHHHHHCCCHHCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
ACPERNNERVQRLMLPETGLTLLASPDGAQGSLQLRQQVWIHHLDLQPGEQQTLALNGPR
HCCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHEEEECCCCCCCCEEEECCHH
AYLQSIHGTIEAHGERNDSQHLTCGDGAFIHEENRLTIRAETPLRALLIDLPV
HHHHHHCCCEEECCCCCCCCEEEECCCCEEEECCEEEEEECCCCEEEEEECCC
>Mature Secondary Structure
MITCRTAQQCGQADFGWLQARYTFSFGHYFDPKLMGYASLRVLNQEVLAPGASFQPRTYP
CEEECCHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SVDILNLILQGKAEYRDSEGNTVNARAGEALLLATQPGLSYSEQNISSDMPLTRLQLWLD
CHHHHHHHHCCCHHCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
ACPERNNERVQRLMLPETGLTLLASPDGAQGSLQLRQQVWIHHLDLQPGEQQTLALNGPR
HCCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHEEEECCCCCCCCEEEECCHH
AYLQSIHGTIEAHGERNDSQHLTCGDGAFIHEENRLTIRAETPLRALLIDLPV
HHHHHHCCCEEECCCCCCCCEEEECCCCEEEECCEEEEEECCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]