| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372535
Identifier: 157372535
GI number: 157372535
Start: 4770153
End: 4770869
Strand: Reverse
Name: 157372535
Synonym: Spro_4302
Alternate gene names: NA
Gene position: 4770869-4770153 (Counterclockwise)
Preceding gene: 157372537
Following gene: 157372534
Centisome position: 87.56
GC content: 59.69
Gene sequence:
>717_bases ATGAAGAAGCAGTGGATAGAGAGTTTGAAACTAGGGTGCGCTCGTTTGTGGCCGCATCCCTTAGCCGTAAGCAAAAAAGA GATATTGCTTTCCAGCGTTGGCGCCGGATTGGGGCTGATGATTTCCGGTTGGATCAGCCATTTTGTTCTGGGCGAAGTGA ACCTGTGGTTTATTGCGCCGATGGGGGCTTCCGCCGTGCTGCTTTTTGGCGTGCCGAACAGTCCGCTGGCGCAGCCATGG TCCATCGTCGGGGGCAATATGTCGGCCGCAGCGGTGGGGGTCAGCACCAGCCTGCTGATAGCCGATCCCGGCCTGGCCTG TGGAGTGGCGGCGGCATTGGCGATTGGGTTAATGTTTAAACTGCGTTGCCTGCATCCTCCCGGCGGCGCGGTCGCGCTGA CTGCGATCCTCGGTGGGCCGGGCATTCATCAACTGGGCTATAGCTTCGTGCTGTACCCGGTGCTGTTGAACTCGGTGTTA TTGGCGCTGCTGGCGATTATCTTCAATAACCTGGCCGGACGACGCTACCCACACCCTCTGGCCTCGGCCGAGGCCAAGCC AGCCAATCTGCCGATCGATGCGGTGTCCATTACCCGCGCCGACTTGCATGAGGCCCTGATGCAGGGCGAACTGTTTGATA TCGACGAAGACGACCTGCAGGAAATCCTGCTGCGTGCCGAACAGTTGGCGCACCAGCGGCAGAACGGTGGCGCCTGA
Upstream 100 bases:
>100_bases GCGGAAAGTTATTTCAACGGCGACCCGCACTGCGGGCGGTGGCTGCCGACGTTGTGATATATTTGTTGCTATTAAGTTGG TTTTGGCAGCGCGAAGTAAC
Downstream 100 bases:
>100_bases TTAGGCTATCGCCATTTCATCGCCATGAAAATCAGGGCAACAAAAAAGCCACTTCGTGTGAAGTGGCTTAATGTGCTGTT ATATCAGCTAAAATTTGGTG
Product: HPP family protein
Products: NA
Alternate protein names: CBS Domain-Containing Protein; CBS Domain Containing Membrane Protein; HPP Family Protein+B; Cbs Domain Containing Membrane Protein; HPP Domain-Containing Protein; HPP Family Membrane Protein; HPP Family/CBS Domain-Containing Protein; CBS Domain-Containing Membrane Protein; CbsHpp; CBS-Domain-Containing Membrane Protein; Signal Transduction Protein; Conserved Protein; Transmembrane Protein; Tryptophan Synthase Alpha Chain; HPP Family; HPP Domain Protein; CBS Domain Pair Family
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MKKQWIESLKLGCARLWPHPLAVSKKEILLSSVGAGLGLMISGWISHFVLGEVNLWFIAPMGASAVLLFGVPNSPLAQPW SIVGGNMSAAAVGVSTSLLIADPGLACGVAAALAIGLMFKLRCLHPPGGAVALTAILGGPGIHQLGYSFVLYPVLLNSVL LALLAIIFNNLAGRRYPHPLASAEAKPANLPIDAVSITRADLHEALMQGELFDIDEDDLQEILLRAEQLAHQRQNGGA
Sequences:
>Translated_238_residues MKKQWIESLKLGCARLWPHPLAVSKKEILLSSVGAGLGLMISGWISHFVLGEVNLWFIAPMGASAVLLFGVPNSPLAQPW SIVGGNMSAAAVGVSTSLLIADPGLACGVAAALAIGLMFKLRCLHPPGGAVALTAILGGPGIHQLGYSFVLYPVLLNSVL LALLAIIFNNLAGRRYPHPLASAEAKPANLPIDAVSITRADLHEALMQGELFDIDEDDLQEILLRAEQLAHQRQNGGA >Mature_238_residues MKKQWIESLKLGCARLWPHPLAVSKKEILLSSVGAGLGLMISGWISHFVLGEVNLWFIAPMGASAVLLFGVPNSPLAQPW SIVGGNMSAAAVGVSTSLLIADPGLACGVAAALAIGLMFKLRCLHPPGGAVALTAILGGPGIHQLGYSFVLYPVLLNSVL LALLAIIFNNLAGRRYPHPLASAEAKPANLPIDAVSITRADLHEALMQGELFDIDEDDLQEILLRAEQLAHQRQNGGA
Specific function: Unknown
COG id: COG3448
COG function: function code T; CBS-domain-containing membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25043; Mature: 25043
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQWIESLKLGCARLWPHPLAVSKKEILLSSVGAGLGLMISGWISHFVLGEVNLWFIAP CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEC MGASAVLLFGVPNSPLAQPWSIVGGNMSAAAVGVSTSLLIADPGLACGVAAALAIGLMFK CCCCEEEEEECCCCCCCCCHHHCCCCCHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHH LRCLHPPGGAVALTAILGGPGIHQLGYSFVLYPVLLNSVLLALLAIIFNNLAGRRYPHPL HHCCCCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ASAEAKPANLPIDAVSITRADLHEALMQGELFDIDEDDLQEILLRAEQLAHQRQNGGA CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKQWIESLKLGCARLWPHPLAVSKKEILLSSVGAGLGLMISGWISHFVLGEVNLWFIAP CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEC MGASAVLLFGVPNSPLAQPWSIVGGNMSAAAVGVSTSLLIADPGLACGVAAALAIGLMFK CCCCEEEEEECCCCCCCCCHHHCCCCCHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHH LRCLHPPGGAVALTAILGGPGIHQLGYSFVLYPVLLNSVLLALLAIIFNNLAGRRYPHPL HHCCCCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ASAEAKPANLPIDAVSITRADLHEALMQGELFDIDEDDLQEILLRAEQLAHQRQNGGA CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA