Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is outJ [H]
Identifier: 157372478
GI number: 157372478
Start: 4708401
End: 4708994
Strand: Reverse
Name: outJ [H]
Synonym: Spro_4245
Alternate gene names: 157372478
Gene position: 4708994-4708401 (Counterclockwise)
Preceding gene: 157372479
Following gene: 157372477
Centisome position: 86.42
GC content: 57.24
Gene sequence:
>594_bases ATGCCAAACCCTGAGCAAAAGGGGTTCACCTTAATCGAAATGATGCTGGCGATCGCGATTTTTTCCTTGATGTCGCTGAT GGCGTCACAGTTGCTGAGCAGCATCGTTAAGAACAATGCCATAGTGCAAGCTCAGGCCAACGCGCTGACCCAGATACAAC AGGCACTGGCTCTGATGGAGCGGGATGTCCGCCAAACCCTGTTGTTCCTGCCTGATCATCCGCTCAGGACCAATCTGGGG ACTGCCCAAGTGGGGGAAGCCTCGCCGACGCTGGCGTTACTGCGTAGCAACTGGCTCAACCCTGGGGGCTTATTGCCTCG TTCCTCCCTGGAGCGCGTCAGTTACCGTCTGCATGACGGGCAGTTGCAGCGCCTGAGCTATCCGACCCCCGATGCCCCGG AAGACAAAGCCAGAGTCGTCACTTTGTTACAGGGTGTAGAACGTTTCCAACTGCGTCACCGGCTTACCGGACGTTGGCAA GAGGGGGCGTTTAACGGTGCCGGTTTACCTCAGGCGATAGAGGTGTCCGTGACCTTGTTCGACCGGGGGGAACTACAGCG TATTTTCTTGACGGCCGATGGAGAGGCGGCATGA
Upstream 100 bases:
>100_bases CAGACCACCGACAGCCATCTGCAGGCTGTTGATATTGAAGTGGATAGCGAACCTGAGTTCAGGTCCCCGATCTTGCGCCT GCGAACCTGGAGGATAAGCG
Downstream 100 bases:
>100_bases AAAAATCACGGGGAATGGCGCTGCTGATCGTCCTGTTATTGCTGGCGCTGATGGCCACTTTGTCGATGGGCATTCATCAG TTTTGGCAGCTTACTTTCAC
Product: general secretion pathway protein J
Products: NA
Alternate protein names: Pectic enzymes secretion protein outJ [H]
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MPNPEQKGFTLIEMMLAIAIFSLMSLMASQLLSSIVKNNAIVQAQANALTQIQQALALMERDVRQTLLFLPDHPLRTNLG TAQVGEASPTLALLRSNWLNPGGLLPRSSLERVSYRLHDGQLQRLSYPTPDAPEDKARVVTLLQGVERFQLRHRLTGRWQ EGAFNGAGLPQAIEVSVTLFDRGELQRIFLTADGEAA
Sequences:
>Translated_197_residues MPNPEQKGFTLIEMMLAIAIFSLMSLMASQLLSSIVKNNAIVQAQANALTQIQQALALMERDVRQTLLFLPDHPLRTNLG TAQVGEASPTLALLRSNWLNPGGLLPRSSLERVSYRLHDGQLQRLSYPTPDAPEDKARVVTLLQGVERFQLRHRLTGRWQ EGAFNGAGLPQAIEVSVTLFDRGELQRIFLTADGEAA >Mature_196_residues PNPEQKGFTLIEMMLAIAIFSLMSLMASQLLSSIVKNNAIVQAQANALTQIQQALALMERDVRQTLLFLPDHPLRTNLGT AQVGEASPTLALLRSNWLNPGGLLPRSSLERVSYRLHDGQLQRLSYPTPDAPEDKARVVTLLQGVERFQLRHRLTGRWQE GAFNGAGLPQAIEVSVTLFDRGELQRIFLTADGEAA
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of the multiple pectic enzymes [H]
COG id: COG4795
COG function: function code U; Type II secretory pathway, component PulJ
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP J family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010055 - InterPro: IPR012902 - InterPro: IPR001120 [H]
Pfam domain/function: PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 21768; Mature: 21637
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNPEQKGFTLIEMMLAIAIFSLMSLMASQLLSSIVKNNAIVQAQANALTQIQQALALME CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH RDVRQTLLFLPDHPLRTNLGTAQVGEASPTLALLRSNWLNPGGLLPRSSLERVSYRLHDG HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC QLQRLSYPTPDAPEDKARVVTLLQGVERFQLRHRLTGRWQEGAFNGAGLPQAIEVSVTLF CHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEE DRGELQRIFLTADGEAA CCCCEEEEEEECCCCCC >Mature Secondary Structure PNPEQKGFTLIEMMLAIAIFSLMSLMASQLLSSIVKNNAIVQAQANALTQIQQALALME CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH RDVRQTLLFLPDHPLRTNLGTAQVGEASPTLALLRSNWLNPGGLLPRSSLERVSYRLHDG HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC QLQRLSYPTPDAPEDKARVVTLLQGVERFQLRHRLTGRWQEGAFNGAGLPQAIEVSVTLF CHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEE DRGELQRIFLTADGEAA CCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8326859 [H]