Definition | Serratia proteamaculans 568 chromosome, complete genome. |
---|---|
Accession | NC_009832 |
Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is pulL [H]
Identifier: 157372476
GI number: 157372476
Start: 4706357
End: 4707451
Strand: Reverse
Name: pulL [H]
Synonym: Spro_4243
Alternate gene names: 157372476
Gene position: 4707451-4706357 (Counterclockwise)
Preceding gene: 157372477
Following gene: 157372475
Centisome position: 86.39
GC content: 59.27
Gene sequence:
>1095_bases ATGACGTGTTCAAAACCCTTGTTGGTGCTGGCATTAGGGGAGGCCGGAGCGCCAATCCTATGGTGTCAGGGAGATCCGAG CGAATCGCAATGGCGGCATGCGGGGGCAGATACCTTGCCGGCGACGCTGCCGATAAAGGCATCGCGATGCAGAGTCGTGG TCTGCGTGCCGGGCCAGTCGGTGACATTGCAGAGGGTGACATTCTCTGGCCCCAGCCGCGCGGCAACGCCTCTGGCCCTG GCTTATCAGTGTGAGGATAGCCTGCTGGAGGAGGTTGAGCAGTTGTATTGGGTAATCCTGGGTCGGCAGGACGACCACTA TGCCCTTGCCGGTTATCGTCATGTGGATATGCAGCGCTGGCTGTCGCAATTGGAACGCTGGGGCATTGTTCCCGACAGCC TGTTGCCAGACACGCTTTGCGGACCGGTCAACGACCGTCATTTCTACCGTTGGCGGGGAAGGTTGTTGCGCAGGACGTCG CCGTGGTCAGGCTATTCGCTGCCGTCACAGTGGCTTTTGGCTCCGTCCGACGTCGTCGACGCCGTTCCCCTGTCTCCTTG CGATGTGTTGTGGGACCGGGTTCGGGGAGAGGCCGAAACGGCAGTTTCACTCCTGCAGGGTAAATATAAGGCGCCGCCAC GCTGGCAACGAAACCCGTTCTGGCGCCACTGGCCCAGCATCGCTGGGGCGGCGTTAACGCTATGCGCCCTGGCGATCGGT GGAGCGCATTATCACCATCAGGCTAAGCAGGCCAACCAGCAACGTGACGCTTTATATCAGCGGCTTTTTGTTGGCCAGCC GATACCGGCGGAACCTGTGAGTGAGAGTGCGCGTTATATCCGAGCGCTACAAGAAGCAAAATCTCCGCGCCAATTCTTCG AACTTGCCGCGCAGGCGCAACGGGCCCTGCAGGGGATCCCGAAACACCGGGTCATTGGCCTGACTTTCGACGCCGACAGG TCAATGCTGGCCATCAGATTACAGGCGCCTGAATTGCAGCCCTTCACGCAAATAAATGATGAAGGTAACACCCTGGAGCT GCAAGTTAACCCGGCCAAACAGCAGGGGACGCTTACCCTGAAGGAAACTCAATGA
Upstream 100 bases:
>100_bases AAGATGCAGACGCCGGTTATTACCTGCGCAGCAAATTGCATTATGAAAAAGGAAGGGTGACGGTGAAAGGCCGTCAAACC GGGCAGGGAGAGAAGGTTCA
Downstream 100 bases:
>100_bases TGTCTCCAACAATGCAGCAGCGTGCGGGCAAAAAGAACGCGGCGCTTATCTTTTGCGGCATGCTCGTCGCGGTCAGCCTT TTGGCATTTTATCTTCAGCA
Product: general secretion pathway L
Products: NA
Alternate protein names: Pullulanase secretion protein pulL [H]
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MTCSKPLLVLALGEAGAPILWCQGDPSESQWRHAGADTLPATLPIKASRCRVVVCVPGQSVTLQRVTFSGPSRAATPLAL AYQCEDSLLEEVEQLYWVILGRQDDHYALAGYRHVDMQRWLSQLERWGIVPDSLLPDTLCGPVNDRHFYRWRGRLLRRTS PWSGYSLPSQWLLAPSDVVDAVPLSPCDVLWDRVRGEAETAVSLLQGKYKAPPRWQRNPFWRHWPSIAGAALTLCALAIG GAHYHHQAKQANQQRDALYQRLFVGQPIPAEPVSESARYIRALQEAKSPRQFFELAAQAQRALQGIPKHRVIGLTFDADR SMLAIRLQAPELQPFTQINDEGNTLELQVNPAKQQGTLTLKETQ
Sequences:
>Translated_364_residues MTCSKPLLVLALGEAGAPILWCQGDPSESQWRHAGADTLPATLPIKASRCRVVVCVPGQSVTLQRVTFSGPSRAATPLAL AYQCEDSLLEEVEQLYWVILGRQDDHYALAGYRHVDMQRWLSQLERWGIVPDSLLPDTLCGPVNDRHFYRWRGRLLRRTS PWSGYSLPSQWLLAPSDVVDAVPLSPCDVLWDRVRGEAETAVSLLQGKYKAPPRWQRNPFWRHWPSIAGAALTLCALAIG GAHYHHQAKQANQQRDALYQRLFVGQPIPAEPVSESARYIRALQEAKSPRQFFELAAQAQRALQGIPKHRVIGLTFDADR SMLAIRLQAPELQPFTQINDEGNTLELQVNPAKQQGTLTLKETQ >Mature_363_residues TCSKPLLVLALGEAGAPILWCQGDPSESQWRHAGADTLPATLPIKASRCRVVVCVPGQSVTLQRVTFSGPSRAATPLALA YQCEDSLLEEVEQLYWVILGRQDDHYALAGYRHVDMQRWLSQLERWGIVPDSLLPDTLCGPVNDRHFYRWRGRLLRRTSP WSGYSLPSQWLLAPSDVVDAVPLSPCDVLWDRVRGEAETAVSLLQGKYKAPPRWQRNPFWRHWPSIAGAALTLCALAIGG AHYHHQAKQANQQRDALYQRLFVGQPIPAEPVSESARYIRALQEAKSPRQFFELAAQAQRALQGIPKHRVIGLTFDADRS MLAIRLQAPELQPFTQINDEGNTLELQVNPAKQQGTLTLKETQ
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of pullulanase [H]
COG id: COG3297
COG function: function code U; Type II secretory pathway, component PulL
Gene ontology:
Cell location: Cell inner membrane (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP L family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007812 [H]
Pfam domain/function: PF05134 GspL [H]
EC number: NA
Molecular weight: Translated: 40789; Mature: 40658
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCSKPLLVLALGEAGAPILWCQGDPSESQWRHAGADTLPATLPIKASRCRVVVCVPGQS CCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHCCCCCCCCCCCEECCCEEEEEEECCCC VTLQRVTFSGPSRAATPLALAYQCEDSLLEEVEQLYWVILGRQDDHYALAGYRHVDMQRW EEEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHEEEECCCCCCEEECCEEHHHHHHH LSQLERWGIVPDSLLPDTLCGPVNDRHFYRWRGRLLRRTSPWSGYSLPSQWLLAPSDVVD HHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHH AVPLSPCDVLWDRVRGEAETAVSLLQGKYKAPPRWQRNPFWRHWPSIAGAALTLCALAIG CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC GAHYHHQAKQANQQRDALYQRLFVGQPIPAEPVSESARYIRALQEAKSPRQFFELAAQAQ CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH RALQGIPKHRVIGLTFDADRSMLAIRLQAPELQPFTQINDEGNTLELQVNPAKQQGTLTL HHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCHHEECCCCCEEEEEECCCCCCCCEEE KETQ ECCC >Mature Secondary Structure TCSKPLLVLALGEAGAPILWCQGDPSESQWRHAGADTLPATLPIKASRCRVVVCVPGQS CCCCCEEEEEECCCCCCEEEECCCCCHHHHHHCCCCCCCCCCCEECCCEEEEEEECCCC VTLQRVTFSGPSRAATPLALAYQCEDSLLEEVEQLYWVILGRQDDHYALAGYRHVDMQRW EEEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHEEEECCCCCCEEECCEEHHHHHHH LSQLERWGIVPDSLLPDTLCGPVNDRHFYRWRGRLLRRTSPWSGYSLPSQWLLAPSDVVD HHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHH AVPLSPCDVLWDRVRGEAETAVSLLQGKYKAPPRWQRNPFWRHWPSIAGAALTLCALAIG CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC GAHYHHQAKQANQQRDALYQRLFVGQPIPAEPVSESARYIRALQEAKSPRQFFELAAQAQ CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH RALQGIPKHRVIGLTFDADRSMLAIRLQAPELQPFTQINDEGNTLELQVNPAKQQGTLTL HHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCHHEECCCCCEEEEEECCCCCCCCEEE KETQ ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2162463 [H]