Click here to switch to the map view.

The map label for this gene is ygiQ [C]

Identifier: 157372467

GI number: 157372467

Start: 4696486

End: 4698651

Strand: Reverse

Name: ygiQ [C]

Synonym: Spro_4234

Alternate gene names: 157372467

Gene position: 4698651-4696486 (Counterclockwise)

Preceding gene: 157372470

Following gene: 157372464

Centisome position: 86.23

GC content: 57.76

Gene sequence:

>2166_bases
ATGAGCACTACCAGTCTGATCCAACCCGACCGTGAATTGTTTTCCTATAAGCCTTATTGGGCCGAATGTTATGGCACCGC
GCCGTTTTTACCGATGTCGCGCGAAGAGATGGATCAACTGGGCTGGGACAGCTGCGATGTGATCATTATCAGTGGTGACG
CCTATGTCGATCACCCAAGTTTTGGCATGGCGATCATCGGCCGTATGTTGGAAGCGCAGGGCTTCCGCGTCGGTATCATC
GCGCAGCCGGACTGGAGTAATAAAGAAGATTTCATGCGTTTGGGCAAACCGAACCTGTTTTTCGGCATCACCGCCGGCAA
TATGGATTCGATGATCAACCGCTATACCGCCGACCGCAAGCTGCGCCACGATGATGCCTATACCGCCGGCAACGTGGGGG
GCAAACGCCCGGATCGCGCGACGCTGGTTTACAGCCAACGCTGTAAAGAAGCCTATAAAGATGTGCCGATCGTACTGGGC
GGGATCGAAGCCAGCCTGCGCCGCATTGCTCACTACGATTACTGGTCGGATACCGTGCGCCGCTCGGTGCTGGTGGATTC
CAAAGCCGACATGCTGATCTACGGCAACGGCGAACGGCCGTTGGTGGAAGTGGCGCACCGTCTGGCCGCCGGCGAAAAAA
TCAGTGAGATCCACGATATCCGCAATACGGCAGTGATGCGCAAGGGCGCGTTACCAGGCTGGACTGGCGTAGATTCTACC
CGTCTGGATAAGCCGGGCCGCATTGAACCCATTCCAAACCCTTACGGCGACGATCTGCCCTGCGCCGACGGCGGCAAGCC
GGAACCGGAAGCCAAGCCGGTCACCGTGCGCGCCGCCAAGCCCAAGCCGTGGGAAAAAACCTACGTGTTGCTGCCGTCCT
TTGAAAAGGTGAAGGCCGACAAGGTGCTGTATGCGCACACCTCGCGTATTTTGCACCATGAAACCAACCCGGGCTGCGCC
CGTGCGCTGATGCAGTCACATGGCGATCGCTACGTGTGGATCAACCCGCCGGCCATTCCGCTGACTACGCCGGAAATGGA
CAGCGTGTTTGCCCTGCCGTACCAGCGTATTCCGCACCCGTCCTACGGCAAGGAAACCATTCCGGCCTATGACATGATCC
GCTTCTCGGTCAACATCATGCGCGGTTGCTACGGCGGTTGTTCATTCTGTTCGATCACCGAGCATGAAGGACGCATCATC
CAGAGCCGTTCGGAAGACTCTATCATTCGTGAAATCGAAGAGATCCGTGACAAGGTGCCGGGCTTTACCGGTGTTATCTC
CGATCTGGGTGGCCCGACGGCCAACATGTATATGCTGCGCTGCACCAACCCGCGCGCAGAGCAGACCTGCCGTCGCGCCT
CGTGCGTGTATCCGGAAATCTGCACCTACATGGACACCAACCACGAGCCGACCATCAAGCTGTATCGCCGTGCGCGCTCG
CTGGAGGGCATCAAGAAGATCCTGATCGCCTCTGGCGTGCGTTACGATCTGGCGGTGGAAGATCCACGTTATATCAAAGA
GCTGGCTACCCATCACGTTGGCGGCTACCTGAAAATTGCCCCGGAACACACCGAGGAAGGCCCGCTGTCGAAAATGAAGA
AGCCGGGTATGGGCAGCTACGATCGGTTTAAACAACTGTTCGACCATTACTCCAAACTGGCGGGCAAAGAGCAGTATCTG
ATCCCGTATTTCATCTCCTCGCATCCGGGCACCCGCGATGAAGATATGGTGAACCTGGCGCTGTGGCTGAAGAAAAACCG
TTTCCGCCTCGACCAGGTGCAGAACTTCTACCCGTCACCGATGGCTAACTCCACCACCATGTATTACAGCGGCAAAAACC
CGTTGAGCCGGGTTGGCTACAAGAGTGAAGATGTGGTGATACCGAAGGGCGATCGTCAGCGTCGCCTGCACAAGGCGCTG
TTGCGTTATCACGATCCGGCCAACTGGGCGATGATCCGTACCGCGCTGGAAGAGATGGGCATGAAGCACCTGATCGGCAG
TCGCCGCGAGTGTCTGGTCCCTGCGCCAAGCATTGACGAGCAGCGTGAAGCCAAGCGTTTGCAGCGCCATACCCGCCCGG
CGTTGACCAAACATACTGACATCACCCGTCAGCGTACGCCGTCCAATAAGCCGCCGCGCAAGCCTATCCGCAGCGGTAAA
CCCTAA

Upstream 100 bases:

>100_bases
CGCCGTGATGTGACCGATGTGTGAAATAACCATGCTCTTTTTGCAACTAGTGCGTATAATCGCCGCCCGGCGATTAATTA
ACCTGTGAAAGAGCACCAGA

Downstream 100 bases:

>100_bases
CGGTCGGGCAGTGCTCTTAAACGAAAAGGAGAACCCCAGGGTTCTCCTTTTTGCGTTGAAAATCAAAGTTGCTCGTAGGC
CGCTTCTACTTTCATCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 721; Mature: 720

Protein sequence:

>721_residues
MSTTSLIQPDRELFSYKPYWAECYGTAPFLPMSREEMDQLGWDSCDVIIISGDAYVDHPSFGMAIIGRMLEAQGFRVGII
AQPDWSNKEDFMRLGKPNLFFGITAGNMDSMINRYTADRKLRHDDAYTAGNVGGKRPDRATLVYSQRCKEAYKDVPIVLG
GIEASLRRIAHYDYWSDTVRRSVLVDSKADMLIYGNGERPLVEVAHRLAAGEKISEIHDIRNTAVMRKGALPGWTGVDST
RLDKPGRIEPIPNPYGDDLPCADGGKPEPEAKPVTVRAAKPKPWEKTYVLLPSFEKVKADKVLYAHTSRILHHETNPGCA
RALMQSHGDRYVWINPPAIPLTTPEMDSVFALPYQRIPHPSYGKETIPAYDMIRFSVNIMRGCYGGCSFCSITEHEGRII
QSRSEDSIIREIEEIRDKVPGFTGVISDLGGPTANMYMLRCTNPRAEQTCRRASCVYPEICTYMDTNHEPTIKLYRRARS
LEGIKKILIASGVRYDLAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMKKPGMGSYDRFKQLFDHYSKLAGKEQYL
IPYFISSHPGTRDEDMVNLALWLKKNRFRLDQVQNFYPSPMANSTTMYYSGKNPLSRVGYKSEDVVIPKGDRQRRLHKAL
LRYHDPANWAMIRTALEEMGMKHLIGSRRECLVPAPSIDEQREAKRLQRHTRPALTKHTDITRQRTPSNKPPRKPIRSGK
P

Sequences:

>Translated_721_residues
MSTTSLIQPDRELFSYKPYWAECYGTAPFLPMSREEMDQLGWDSCDVIIISGDAYVDHPSFGMAIIGRMLEAQGFRVGII
AQPDWSNKEDFMRLGKPNLFFGITAGNMDSMINRYTADRKLRHDDAYTAGNVGGKRPDRATLVYSQRCKEAYKDVPIVLG
GIEASLRRIAHYDYWSDTVRRSVLVDSKADMLIYGNGERPLVEVAHRLAAGEKISEIHDIRNTAVMRKGALPGWTGVDST
RLDKPGRIEPIPNPYGDDLPCADGGKPEPEAKPVTVRAAKPKPWEKTYVLLPSFEKVKADKVLYAHTSRILHHETNPGCA
RALMQSHGDRYVWINPPAIPLTTPEMDSVFALPYQRIPHPSYGKETIPAYDMIRFSVNIMRGCYGGCSFCSITEHEGRII
QSRSEDSIIREIEEIRDKVPGFTGVISDLGGPTANMYMLRCTNPRAEQTCRRASCVYPEICTYMDTNHEPTIKLYRRARS
LEGIKKILIASGVRYDLAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMKKPGMGSYDRFKQLFDHYSKLAGKEQYL
IPYFISSHPGTRDEDMVNLALWLKKNRFRLDQVQNFYPSPMANSTTMYYSGKNPLSRVGYKSEDVVIPKGDRQRRLHKAL
LRYHDPANWAMIRTALEEMGMKHLIGSRRECLVPAPSIDEQREAKRLQRHTRPALTKHTDITRQRTPSNKPPRKPIRSGK
P
>Mature_720_residues
STTSLIQPDRELFSYKPYWAECYGTAPFLPMSREEMDQLGWDSCDVIIISGDAYVDHPSFGMAIIGRMLEAQGFRVGIIA
QPDWSNKEDFMRLGKPNLFFGITAGNMDSMINRYTADRKLRHDDAYTAGNVGGKRPDRATLVYSQRCKEAYKDVPIVLGG
IEASLRRIAHYDYWSDTVRRSVLVDSKADMLIYGNGERPLVEVAHRLAAGEKISEIHDIRNTAVMRKGALPGWTGVDSTR
LDKPGRIEPIPNPYGDDLPCADGGKPEPEAKPVTVRAAKPKPWEKTYVLLPSFEKVKADKVLYAHTSRILHHETNPGCAR
ALMQSHGDRYVWINPPAIPLTTPEMDSVFALPYQRIPHPSYGKETIPAYDMIRFSVNIMRGCYGGCSFCSITEHEGRIIQ
SRSEDSIIREIEEIRDKVPGFTGVISDLGGPTANMYMLRCTNPRAEQTCRRASCVYPEICTYMDTNHEPTIKLYRRARSL
EGIKKILIASGVRYDLAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMKKPGMGSYDRFKQLFDHYSKLAGKEQYLI
PYFISSHPGTRDEDMVNLALWLKKNRFRLDQVQNFYPSPMANSTTMYYSGKNPLSRVGYKSEDVVIPKGDRQRRLHKALL
RYHDPANWAMIRTALEEMGMKHLIGSRRECLVPAPSIDEQREAKRLQRHTRPALTKHTDITRQRTPSNKPPRKPIRSGKP

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=713, Percent_Identity=83.8709677419355, Blast_Score=1272, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 81870; Mature: 81739

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTSLIQPDRELFSYKPYWAECYGTAPFLPMSREEMDQLGWDSCDVIIISGDAYVDHPS
CCCCCCCCCCHHHHCCCCCHHHHCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEECCCC
FGMAIIGRMLEAQGFRVGIIAQPDWSNKEDFMRLGKPNLFFGITAGNMDSMINRYTADRK
HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
LRHDDAYTAGNVGGKRPDRATLVYSQRCKEAYKDVPIVLGGIEASLRRIAHYDYWSDTVR
HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCHHHHHHH
RSVLVDSKADMLIYGNGERPLVEVAHRLAAGEKISEIHDIRNTAVMRKGALPGWTGVDST
HHHEECCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RLDKPGRIEPIPNPYGDDLPCADGGKPEPEAKPVTVRAAKPKPWEKTYVLLPSFEKVKAD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHC
KVLYAHTSRILHHETNPGCARALMQSHGDRYVWINPPAIPLTTPEMDSVFALPYQRIPHP
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEECCHHHCCCC
SYGKETIPAYDMIRFSVNIMRGCYGGCSFCSITEHEGRIIQSRSEDSIIREIEEIRDKVP
CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHCC
GFTGVISDLGGPTANMYMLRCTNPRAEQTCRRASCVYPEICTYMDTNHEPTIKLYRRARS
CHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHH
LEGIKKILIASGVRYDLAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMKKPGMGSY
HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHCCCCCCCH
DRFKQLFDHYSKLAGKEQYLIPYFISSHPGTRDEDMVNLALWLKKNRFRLDQVQNFYPSP
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHEEHHCCCCCHHHHHHCCCCC
MANSTTMYYSGKNPLSRVGYKSEDVVIPKGDRQRRLHKALLRYHDPANWAMIRTALEEMG
CCCCEEEEECCCCHHHHCCCCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
MKHLIGSRRECLVPAPSIDEQREAKRLQRHTRPALTKHTDITRQRTPSNKPPRKPIRSGK
HHHHHCCCCCEECCCCCCCHHHHHHHHHHHCCCCHHHCCCCHHCCCCCCCCCCCCCCCCC
P
C
>Mature Secondary Structure 
STTSLIQPDRELFSYKPYWAECYGTAPFLPMSREEMDQLGWDSCDVIIISGDAYVDHPS
CCCCCCCCCHHHHCCCCCHHHHCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEECCCC
FGMAIIGRMLEAQGFRVGIIAQPDWSNKEDFMRLGKPNLFFGITAGNMDSMINRYTADRK
HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
LRHDDAYTAGNVGGKRPDRATLVYSQRCKEAYKDVPIVLGGIEASLRRIAHYDYWSDTVR
HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCHHHHHHH
RSVLVDSKADMLIYGNGERPLVEVAHRLAAGEKISEIHDIRNTAVMRKGALPGWTGVDST
HHHEECCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RLDKPGRIEPIPNPYGDDLPCADGGKPEPEAKPVTVRAAKPKPWEKTYVLLPSFEKVKAD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHC
KVLYAHTSRILHHETNPGCARALMQSHGDRYVWINPPAIPLTTPEMDSVFALPYQRIPHP
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEECCHHHCCCC
SYGKETIPAYDMIRFSVNIMRGCYGGCSFCSITEHEGRIIQSRSEDSIIREIEEIRDKVP
CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHCC
GFTGVISDLGGPTANMYMLRCTNPRAEQTCRRASCVYPEICTYMDTNHEPTIKLYRRARS
CHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHH
LEGIKKILIASGVRYDLAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMKKPGMGSY
HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHCCCCCCCH
DRFKQLFDHYSKLAGKEQYLIPYFISSHPGTRDEDMVNLALWLKKNRFRLDQVQNFYPSP
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHEEHHCCCCCHHHHHHCCCCC
MANSTTMYYSGKNPLSRVGYKSEDVVIPKGDRQRRLHKALLRYHDPANWAMIRTALEEMG
CCCCEEEEECCCCHHHHCCCCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
MKHLIGSRRECLVPAPSIDEQREAKRLQRHTRPALTKHTDITRQRTPSNKPPRKPIRSGK
HHHHHCCCCCEECCCCCCCHHHHHHHHHHHCCCCHHHCCCCHHCCCCCCCCCCCCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]