Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is 157372470
Identifier: 157372470
GI number: 157372470
Start: 4700871
End: 4702301
Strand: Reverse
Name: 157372470
Synonym: Spro_4237
Alternate gene names: NA
Gene position: 4702301-4700871 (Counterclockwise)
Preceding gene: 157372471
Following gene: 157372467
Centisome position: 86.3
GC content: 53.18
Gene sequence:
>1431_bases ATGTTTAGCAATAACCTCAATTACCTTATTCCTTTGACTTTATTTATCCCTTGTTTGTCCCTGGCTTCGCCTCTGACCCC CGAATACACCCCTACCCAGGTGATTGACGGTGGTGATGTTGGCATCTTTAACGTGGTGTGCGACTACTCTCATACGTTGG CCGATGACGCGATTGTCATGCCGGGCTTGCCAGGGGTCTCGATGATCCATGATTTTTTTGGCAATACCGAGGCGGATGCG ATGAGCACGACCGAGTCATTGCAAAAATCCCCGACCACCACCTGTACCTCGCCCTATGACAGCTCCTCTTATTGGGCGCC GCAGCTAAAACTAGCGGATGACAGCGTTGTTACACCCAGCTATATCAAGGTTTATTACCGTAACAATATACCGGAGCAGG CCGTTGCGCCTATCCCGCCGGGGTTGCAACTGTTGGTAGGTAACCACCATAGGTCGCCAGACGATTATGATCCTTATATT TGGTTTTACTGCCGCACATCGCTTGAGGGCGGGGTGCATTCCAACGATCCACCGGAGAGCTGCCCGCAGATAGCCGGGTT TGACGAAGGCGCAGAATTCAATATTTCGCTTAACTTCCCGGACTGCTGGAATGGCACCAGCCTGACCACTAACCCGCACA AACGCAATGCGGCTTACAGCGATAAATTAACCGGTCTATGCCCTGCGGCATATCCGGTGAAGCTCCCGCAGCTGAATATG CGTATCCATTATGCTTTGGGTGAAAATAGCAATCTTAAAGGGGCCAAATTGTCCATGAACCCCGTTCTGCAGGCTGACGG CAGTTTGCTCCCTAAATGGGGTGACCTTTATGCTGCGCACGCGGATTTCTTTGCCGCCTGGAGCTCGCGTGCCACGCGTT ACAGCGTGGAGGAGTGCCTTAATCGCAAGATTGCCTGCGATAAGGATATTCCGGGCGATTTCGAGCGTAGCAGCGATGAT GCCTGGGTTTCGGTGACCGATGGGCGTCTTCATGGTGATGAGGCGGTGATCAAGGTCGGGGGAGAGCAAAATATCGGCTT AATCAAATTTGACCTGCCGGAGCGTCTCGACAACCTGAATATCACCAAAACCGACCTGCGTCTCTATGGCCGTCAGGTTA GCGGCGAAACCGGGCAGGTACGGTTATATGCACTGCCGGGGGTGAATTGGGATGAAAATCAGGGGCAACATGCCATCAAG AACTGTCCATCGGCCCAATTGGATCACGCGCAGATGTGGACCGATTCGGTGCAGAAAACCTTTGACGTCACTGCCGCCGT CACGCAAGCCCTACAGGCCGGGCAGCGTGAGATGAGTTTTTGTCTGAGCGGCAGTCAAGATGCGGATGCCGAATTCAGCA GCAAAGAGGGGCCTCGCGGGCCGGTGTTGCGTTTCTATTTTACCCCCGAAAATAGCCATCAAAACCCTTAA
Upstream 100 bases:
>100_bases AAAACATTCTCTCAAGAATGGTCTGACCGCCCTCTATCCATTATTTATCCGGGTTATGTACAACAGAAAATATTGTTTGT TCATTTCAAAAGGAAAAAAC
Downstream 100 bases:
>100_bases CCTTTTGCCGTCGCTAGGGACGCAGGGACGAAGGAGACCGGCCGAACTGGCGACGGAAGTGGGTACTGAATTGCGCCGGG GCGCTGAAACCGCATTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Coagulation Factor 5/8 Type Domain-Containing Protein; Periplasmic Or Exported Protein
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MFSNNLNYLIPLTLFIPCLSLASPLTPEYTPTQVIDGGDVGIFNVVCDYSHTLADDAIVMPGLPGVSMIHDFFGNTEADA MSTTESLQKSPTTTCTSPYDSSSYWAPQLKLADDSVVTPSYIKVYYRNNIPEQAVAPIPPGLQLLVGNHHRSPDDYDPYI WFYCRTSLEGGVHSNDPPESCPQIAGFDEGAEFNISLNFPDCWNGTSLTTNPHKRNAAYSDKLTGLCPAAYPVKLPQLNM RIHYALGENSNLKGAKLSMNPVLQADGSLLPKWGDLYAAHADFFAAWSSRATRYSVEECLNRKIACDKDIPGDFERSSDD AWVSVTDGRLHGDEAVIKVGGEQNIGLIKFDLPERLDNLNITKTDLRLYGRQVSGETGQVRLYALPGVNWDENQGQHAIK NCPSAQLDHAQMWTDSVQKTFDVTAAVTQALQAGQREMSFCLSGSQDADAEFSSKEGPRGPVLRFYFTPENSHQNP
Sequences:
>Translated_476_residues MFSNNLNYLIPLTLFIPCLSLASPLTPEYTPTQVIDGGDVGIFNVVCDYSHTLADDAIVMPGLPGVSMIHDFFGNTEADA MSTTESLQKSPTTTCTSPYDSSSYWAPQLKLADDSVVTPSYIKVYYRNNIPEQAVAPIPPGLQLLVGNHHRSPDDYDPYI WFYCRTSLEGGVHSNDPPESCPQIAGFDEGAEFNISLNFPDCWNGTSLTTNPHKRNAAYSDKLTGLCPAAYPVKLPQLNM RIHYALGENSNLKGAKLSMNPVLQADGSLLPKWGDLYAAHADFFAAWSSRATRYSVEECLNRKIACDKDIPGDFERSSDD AWVSVTDGRLHGDEAVIKVGGEQNIGLIKFDLPERLDNLNITKTDLRLYGRQVSGETGQVRLYALPGVNWDENQGQHAIK NCPSAQLDHAQMWTDSVQKTFDVTAAVTQALQAGQREMSFCLSGSQDADAEFSSKEGPRGPVLRFYFTPENSHQNP >Mature_476_residues MFSNNLNYLIPLTLFIPCLSLASPLTPEYTPTQVIDGGDVGIFNVVCDYSHTLADDAIVMPGLPGVSMIHDFFGNTEADA MSTTESLQKSPTTTCTSPYDSSSYWAPQLKLADDSVVTPSYIKVYYRNNIPEQAVAPIPPGLQLLVGNHHRSPDDYDPYI WFYCRTSLEGGVHSNDPPESCPQIAGFDEGAEFNISLNFPDCWNGTSLTTNPHKRNAAYSDKLTGLCPAAYPVKLPQLNM RIHYALGENSNLKGAKLSMNPVLQADGSLLPKWGDLYAAHADFFAAWSSRATRYSVEECLNRKIACDKDIPGDFERSSDD AWVSVTDGRLHGDEAVIKVGGEQNIGLIKFDLPERLDNLNITKTDLRLYGRQVSGETGQVRLYALPGVNWDENQGQHAIK NCPSAQLDHAQMWTDSVQKTFDVTAAVTQALQAGQREMSFCLSGSQDADAEFSSKEGPRGPVLRFYFTPENSHQNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52393; Mature: 52393
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSNNLNYLIPLTLFIPCLSLASPLTPEYTPTQVIDGGDVGIFNVVCDYSHTLADDAIVM CCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEEEEECCCHHHCCCCEEE PGLPGVSMIHDFFGNTEADAMSTTESLQKSPTTTCTSPYDSSSYWAPQLKLADDSVVTPS CCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHH YIKVYYRNNIPEQAVAPIPPGLQLLVGNHHRSPDDYDPYIWFYCRTSLEGGVHSNDPPES HEEEEECCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHH CPQIAGFDEGAEFNISLNFPDCWNGTSLTTNPHKRNAAYSDKLTGLCPAAYPVKLPQLNM CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEECCEECE RIHYALGENSNLKGAKLSMNPVLQADGSLLPKWGDLYAAHADFFAAWSSRATRYSVEECL EEEEEECCCCCCCCCEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHH NRKIACDKDIPGDFERSSDDAWVSVTDGRLHGDEAVIKVGGEQNIGLIKFDLPERLDNLN CCCCCCCCCCCCCCCCCCCCCEEEEECCEECCCCEEEEECCCCCCEEEEECCHHHHCCCC ITKTDLRLYGRQVSGETGQVRLYALPGVNWDENQGQHAIKNCPSAQLDHAQMWTDSVQKT CCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHH FDVTAAVTQALQAGQREMSFCLSGSQDADAEFSSKEGPRGPVLRFYFTPENSHQNP HHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MFSNNLNYLIPLTLFIPCLSLASPLTPEYTPTQVIDGGDVGIFNVVCDYSHTLADDAIVM CCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEEEEECCCHHHCCCCEEE PGLPGVSMIHDFFGNTEADAMSTTESLQKSPTTTCTSPYDSSSYWAPQLKLADDSVVTPS CCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHH YIKVYYRNNIPEQAVAPIPPGLQLLVGNHHRSPDDYDPYIWFYCRTSLEGGVHSNDPPES HEEEEECCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHH CPQIAGFDEGAEFNISLNFPDCWNGTSLTTNPHKRNAAYSDKLTGLCPAAYPVKLPQLNM CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEECCEECE RIHYALGENSNLKGAKLSMNPVLQADGSLLPKWGDLYAAHADFFAAWSSRATRYSVEECL EEEEEECCCCCCCCCEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHH NRKIACDKDIPGDFERSSDDAWVSVTDGRLHGDEAVIKVGGEQNIGLIKFDLPERLDNLN CCCCCCCCCCCCCCCCCCCCCEEEEECCEECCCCEEEEECCCCCCEEEEECCHHHHCCCC ITKTDLRLYGRQVSGETGQVRLYALPGVNWDENQGQHAIKNCPSAQLDHAQMWTDSVQKT CCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHH FDVTAAVTQALQAGQREMSFCLSGSQDADAEFSSKEGPRGPVLRFYFTPENSHQNP HHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA