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The map label for this gene is yjcF [C]

Identifier: 157372423

GI number: 157372423

Start: 4642182

End: 4643252

Strand: Reverse

Name: yjcF [C]

Synonym: Spro_4190

Alternate gene names: 157372423

Gene position: 4643252-4642182 (Counterclockwise)

Preceding gene: 157372424

Following gene: 157372422

Centisome position: 85.22

GC content: 55.74

Gene sequence:

>1071_bases
ATGACGACGCTGAGCGCGGCAGAGCTACAGCAGAAAATAAAAAATGGCGAGATGATTAACGCCTGCAACCTCGATGGTCT
CGAGCTGCAAGGATACGACCTGTCCGGCGGAATTTTTCAGGATGTCTCACTGCTGGGGGCGAACCTGCAGGCGGCCAATT
TACATGAAGCGGTATTTAATGAGTGTCTGTTGAATGGGGTGACGCTGAGCGGCGCCCGCATGCAGCAGAGCGTGTTTAAC
GACTGTGAAATGACGGCAATCAGCGCCTGCGACACGCTAATGGCGCAGTGCATCTTTAATCATTGCGAGCTTGGCAACGG
CGATTTCTCCCGCAGCAGGTTCGACGCTTGCCAATTCATGCGCAGCCCGCTATCCGGCAGCACCTTCAACCAGTCCACGC
TGGAACGTACTACCTTCTTCGAGAGCTCGCTGGATGAGGCGCAACTGGAGCAGTGCCAGTGCCTGCAGACGACCTTTTTC
AATATCGACTTGCGCACGACCCGTTTGGGCCACAGCCAATTCGACCGTACGGTCTTTTTCAACTGCGATCAGCGTGGAAA
AAACTATGCCCAGCAGCGCTTTAGCGGCTGTCAGTTTACCGATAATCAGCTCGACGCGGTCGATTTTAACGGGGCGCAGC
TGACGCAGTGCAATTTCAAAGGCGCTTCGCTGAGAAAGGCTCAACTCCGTAAGGTGAACGCCAGCCAGGCGCTGTTTATG
AGTGCGGACCTTACCGGAGCCAACTGTCAGGGCAGTTTGTTTGATCAGGCGTTGTTTATCGGTGCCAGGTTACAACAGGC
CGATTTTAGCCACAGCCGCCTGTTCCAGAGCATTTTGCAGCAGGTGAAGGCCGAAGACAGCAACTTTGCCCTGTGCGATC
TGACCTACAGCGATTTCACCCATGCTGATTTGCGCCGGGCCGATTTCCGCAGTGCCACATTTTCCCGCACCCGGTTCCAT
CGGGCGCAGCAGGAGGGAGCCCACTTTTCCGATCGCCGGGGCATCCTTGAGTATGACGAAGAGTTACTGGCTGCGGAGGC
CTGGAGCCTTCAGCATCAGAGCCGCCGTTAA

Upstream 100 bases:

>100_bases
GCGCCGATCTGTCACAATCCTTTATTAATATGGAGACGCGGCTGGACAACGCCTATACCAGCCGGGTGAAGACTCTGCCG
AAGCGGGATGAGGAACTGTC

Downstream 100 bases:

>100_bases
GGAGAGAAGATGAACAATATCAATCACAAACTGCTACAAGCGGCAGCACCGCCACTACAGAGTGCGGGGGTGGTGACCCA
CTGCTTTTCCAACGGCAGCC

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MTTLSAAELQQKIKNGEMINACNLDGLELQGYDLSGGIFQDVSLLGANLQAANLHEAVFNECLLNGVTLSGARMQQSVFN
DCEMTAISACDTLMAQCIFNHCELGNGDFSRSRFDACQFMRSPLSGSTFNQSTLERTTFFESSLDEAQLEQCQCLQTTFF
NIDLRTTRLGHSQFDRTVFFNCDQRGKNYAQQRFSGCQFTDNQLDAVDFNGAQLTQCNFKGASLRKAQLRKVNASQALFM
SADLTGANCQGSLFDQALFIGARLQQADFSHSRLFQSILQQVKAEDSNFALCDLTYSDFTHADLRRADFRSATFSRTRFH
RAQQEGAHFSDRRGILEYDEELLAAEAWSLQHQSRR

Sequences:

>Translated_356_residues
MTTLSAAELQQKIKNGEMINACNLDGLELQGYDLSGGIFQDVSLLGANLQAANLHEAVFNECLLNGVTLSGARMQQSVFN
DCEMTAISACDTLMAQCIFNHCELGNGDFSRSRFDACQFMRSPLSGSTFNQSTLERTTFFESSLDEAQLEQCQCLQTTFF
NIDLRTTRLGHSQFDRTVFFNCDQRGKNYAQQRFSGCQFTDNQLDAVDFNGAQLTQCNFKGASLRKAQLRKVNASQALFM
SADLTGANCQGSLFDQALFIGARLQQADFSHSRLFQSILQQVKAEDSNFALCDLTYSDFTHADLRRADFRSATFSRTRFH
RAQQEGAHFSDRRGILEYDEELLAAEAWSLQHQSRR
>Mature_355_residues
TTLSAAELQQKIKNGEMINACNLDGLELQGYDLSGGIFQDVSLLGANLQAANLHEAVFNECLLNGVTLSGARMQQSVFND
CEMTAISACDTLMAQCIFNHCELGNGDFSRSRFDACQFMRSPLSGSTFNQSTLERTTFFESSLDEAQLEQCQCLQTTFFN
IDLRTTRLGHSQFDRTVFFNCDQRGKNYAQQRFSGCQFTDNQLDAVDFNGAQLTQCNFKGASLRKAQLRKVNASQALFMS
ADLTGANCQGSLFDQALFIGARLQQADFSHSRLFQSILQQVKAEDSNFALCDLTYSDFTHADLRRADFRSATFSRTRFHR
AQQEGAHFSDRRGILEYDEELLAAEAWSLQHQSRR

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 39958; Mature: 39827

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLSAAELQQKIKNGEMINACNLDGLELQGYDLSGGIFQDVSLLGANLQAANLHEAVFN
CCCCCHHHHHHHHHCCCEEEECCCCCCEEECEECCCCHHHHHHHHCCCCCHHHHHHHHHH
ECLLNGVTLSGARMQQSVFNDCEMTAISACDTLMAQCIFNHCELGNGDFSRSRFDACQFM
HHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
RSPLSGSTFNQSTLERTTFFESSLDEAQLEQCQCLQTTFFNIDLRTTRLGHSQFDRTVFF
HCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEEEEECCCHHCCCEEEE
NCDQRGKNYAQQRFSGCQFTDNQLDAVDFNGAQLTQCNFKGASLRKAQLRKVNASQALFM
ECCHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHCCCCCEEEE
SADLTGANCQGSLFDQALFIGARLQQADFSHSRLFQSILQQVKAEDSNFALCDLTYSDFT
ECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
HADLRRADFRSATFSRTRFHRAQQEGAHFSDRRGILEYDEELLAAEAWSLQHQSRR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTLSAAELQQKIKNGEMINACNLDGLELQGYDLSGGIFQDVSLLGANLQAANLHEAVFN
CCCCHHHHHHHHHCCCEEEECCCCCCEEECEECCCCHHHHHHHHCCCCCHHHHHHHHHH
ECLLNGVTLSGARMQQSVFNDCEMTAISACDTLMAQCIFNHCELGNGDFSRSRFDACQFM
HHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
RSPLSGSTFNQSTLERTTFFESSLDEAQLEQCQCLQTTFFNIDLRTTRLGHSQFDRTVFF
HCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEEEEECCCHHCCCEEEE
NCDQRGKNYAQQRFSGCQFTDNQLDAVDFNGAQLTQCNFKGASLRKAQLRKVNASQALFM
ECCHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHCCCCCEEEE
SADLTGANCQGSLFDQALFIGARLQQADFSHSRLFQSILQQVKAEDSNFALCDLTYSDFT
ECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
HADLRRADFRSATFSRTRFHRAQQEGAHFSDRRGILEYDEELLAAEAWSLQHQSRR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]